Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_A10
(530 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical pr... 33 0.17
U13642-2|AAG00042.2| 430|Caenorhabditis elegans Abnormal growth... 31 0.68
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 31 0.68
AY052773-1|AAL14112.1| 430|Caenorhabditis elegans tRNA isopente... 31 0.68
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 31 0.68
Z83112-2|CAB05539.1| 391|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF125964-4|ABA03109.1| 414|Caenorhabditis elegans Hypothetical ... 30 1.2
AF047655-3|ABD63244.1| 414|Caenorhabditis elegans Hypothetical ... 30 1.2
AF025465-11|AAB71024.1| 411|Caenorhabditis elegans Hypothetical... 30 1.2
AF016422-3|AAG24173.1| 411|Caenorhabditis elegans Hypothetical ... 30 1.2
AC024831-4|ABD63212.1| 355|Caenorhabditis elegans Hypothetical ... 30 1.2
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 29 1.6
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 29 1.6
U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z92973-6|CAI79258.1| 440|Caenorhabditis elegans Hypothetical pr... 27 6.3
U46753-12|AAM98047.2| 539|Caenorhabditis elegans Dishevelled re... 27 8.4
U46753-11|AAM98048.1| 425|Caenorhabditis elegans Dishevelled re... 27 8.4
U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled re... 27 8.4
>Z81554-1|CAB04506.1| 838|Caenorhabditis elegans Hypothetical
protein F57G4.1 protein.
Length = 838
Score = 32.7 bits (71), Expect = 0.17
Identities = 15/55 (27%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +1
Query: 277 QVQDSTTDDDLLRISEEMFSADI--NNAFNYIQVSLQGKTSPMSKNDEASSNLLN 435
Q+++ + D +++S E S + NN +++ ++ G++SP+ ND+ S + LN
Sbjct: 343 QMEELLENQDFMKLSIEDLSTSLAMNNVLSFLSITFYGESSPL-PNDDISISFLN 396
>U13642-2|AAG00042.2| 430|Caenorhabditis elegans Abnormal growth
rate protein 1 protein.
Length = 430
Score = 30.7 bits (66), Expect = 0.68
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +1
Query: 208 QIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFSADINNAFNYIQVSLQGK 387
+I +VGG YA+ Y++ L + S D R S E S D +S Q
Sbjct: 110 KIPVIVGGTTYYAESVLYENNLIETNTSDDVDSKSRTSSESSSEDTEEG-----ISNQEL 164
Query: 388 TSPMSKNDEASSNLLNVPEN 447
+ K DE S+ LL+ P N
Sbjct: 165 WDELKKIDEKSALLLH-PNN 183
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 30.7 bits (66), Expect = 0.68
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 256 SYDDMLRQVQDSTTDDDLLRISEEMFSADINNAFNYIQVS 375
+YDD+LR +++ DD+ L + A+++NA +Q S
Sbjct: 1568 NYDDILRSIENEIRDDNELTAKNQEILAELSNAEQTLQNS 1607
>AY052773-1|AAL14112.1| 430|Caenorhabditis elegans tRNA isopentenyl
transferase protein.
Length = 430
Score = 30.7 bits (66), Expect = 0.68
Identities = 25/80 (31%), Positives = 35/80 (43%)
Frame = +1
Query: 208 QIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFSADINNAFNYIQVSLQGK 387
+I +VGG YA+ Y++ L + S D R S E S D +S Q
Sbjct: 110 KIPVIVGGTTYYAESVLYENNLIETNTSDDVDSKSRTSSESSSEDTEEG-----ISNQEL 164
Query: 388 TSPMSKNDEASSNLLNVPEN 447
+ K DE S+ LL+ P N
Sbjct: 165 WDELKKIDEKSALLLH-PNN 183
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 30.7 bits (66), Expect = 0.68
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +1
Query: 256 SYDDMLRQVQDSTTDDDLLRISEEMFSADINNAFNYIQVS 375
+YDD+LR +++ DD+ L + A+++NA +Q S
Sbjct: 1568 NYDDILRSIENEIRDDNELTAKNQEILAELSNAEQTLQNS 1607
>Z83112-2|CAB05539.1| 391|Caenorhabditis elegans Hypothetical
protein K02B7.2 protein.
Length = 391
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +1
Query: 202 LQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFSADINNAFNYIQVSLQ 381
L+++G VGG +DY+ +S D+++R D+ + + I M ++ + S+
Sbjct: 188 LKRLGENVGGSIDYS-YESIDELIRTAPDAWSKASMGAIRGVMLMQEL-----VTERSMH 241
Query: 382 GKTSPMSKN 408
K+ PM KN
Sbjct: 242 PKSKPMEKN 250
>AF125964-4|ABA03109.1| 414|Caenorhabditis elegans Hypothetical
protein W03G1.3 protein.
Length = 414
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +1
Query: 202 LQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFSADINNAFNYIQVSLQ 381
L+++G VGG +DY+ +S D+++R D+ + + I M ++ + S+
Sbjct: 152 LKRLGENVGGSIDYS-YESIDELIRTAPDAWSKASMGAIRGVMLMQEL-----VTERSMH 205
Query: 382 GKTSPMSKN 408
K+ PM KN
Sbjct: 206 PKSKPMEKN 214
>AF047655-3|ABD63244.1| 414|Caenorhabditis elegans Hypothetical
protein C17B7.13 protein.
Length = 414
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +1
Query: 202 LQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFSADINNAFNYIQVSLQ 381
L+++G VGG +DY+ +S D+++R D+ + + I M ++ + S+
Sbjct: 152 LKRLGENVGGSIDYS-YESIDELIRTAPDAWSKASMGAIRGVMLMQEL-----VTERSMH 205
Query: 382 GKTSPMSKN 408
K+ PM KN
Sbjct: 206 PKSKPMEKN 214
>AF025465-11|AAB71024.1| 411|Caenorhabditis elegans Hypothetical
protein K02E7.2 protein.
Length = 411
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +1
Query: 202 LQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFSADINNAFNYIQVSLQ 381
L+++G VGG +DY+ +S D+++R D+ + + I M ++ + S+
Sbjct: 149 LKRLGENVGGSIDYS-YESIDELIRTAPDAWSKASMGAIRGVMLMQEL-----VTERSMH 202
Query: 382 GKTSPMSKN 408
K+ PM KN
Sbjct: 203 PKSKPMEKN 211
>AF016422-3|AAG24173.1| 411|Caenorhabditis elegans Hypothetical
protein R09E12.5 protein.
Length = 411
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +1
Query: 202 LQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFSADINNAFNYIQVSLQ 381
L+++G VGG +DY+ +S D+++R D+ + + I M ++ + S+
Sbjct: 149 LKRLGENVGGSIDYS-YESIDELIRTAPDAWSKASMGAIRGVMLMQEL-----VTERSMH 202
Query: 382 GKTSPMSKN 408
K+ PM KN
Sbjct: 203 PKSKPMEKN 211
>AC024831-4|ABD63212.1| 355|Caenorhabditis elegans Hypothetical
protein Y55F3C.11 protein.
Length = 355
Score = 29.9 bits (64), Expect = 1.2
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +1
Query: 202 LQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDDDLLRISEEMFSADINNAFNYIQVSLQ 381
L+++G VGG +DY+ +S D+++R D+ + + I M ++ + S+
Sbjct: 152 LKRLGENVGGSIDYS-YESIDELIRTAPDAWSKASMGAIRGVMLMQEL-----VTERSMH 205
Query: 382 GKTSPMSKN 408
K+ PM KN
Sbjct: 206 PKSKPMEKN 214
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 154 ISNSVTGQQGNTAQNTLQQIGTVVGGVVD 240
+S ++ Q GN+AQ L +GT+V VD
Sbjct: 414 VSPTIMYQSGNSAQGVLNSLGTMVDNTVD 442
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 154 ISNSVTGQQGNTAQNTLQQIGTVVGGVVD 240
+S ++ Q GN+AQ L +GT+V VD
Sbjct: 396 VSPTIMYQSGNSAQGVLNSLGTMVDNTVD 424
>U41543-6|AAB37023.1| 2018|Caenorhabditis elegans Hypothetical
protein F46H5.4 protein.
Length = 2018
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +1
Query: 259 YDDMLRQVQDSTTDDDLLRISEEMFSAD---INNAFNY-IQVSLQGKTSPMSKNDEASSN 426
+ +RQ D T+D+D+ RI EM + FN+ ++++L G S+
Sbjct: 505 FSSFIRQEGDKTSDEDIYRICSEMRRTNGKVHKKMFNFELELTLAGSNKSKEYQSHGSNL 564
Query: 427 LLNVPENVWSGPTIRPFVALFDHYHNTVI 513
LN + I + A + + VI
Sbjct: 565 TLNSERVIHEAMEIPIYQASLNKSYKNVI 593
>Z72503-7|CAA96597.1| 424|Caenorhabditis elegans Hypothetical
protein C26C6.4a protein.
Length = 424
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 313 RISEEMFSADINNAFNYIQVSLQGKTSP 396
R+S+E+ DI+N +N++Q S Q K P
Sbjct: 58 RVSKELSFEDIHNEYNFMQFSEQLKAMP 85
>Z92973-6|CAI79258.1| 440|Caenorhabditis elegans Hypothetical
protein Y6G8.5 protein.
Length = 440
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/55 (23%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +1
Query: 277 QVQDSTTDDDLLRISEEMFSADI--NNAFNYIQVSLQGKTSPMSKNDEASSNLLN 435
Q+++ + D +++ E S + NN +++ +++ GK+S + ND+ S+ L+
Sbjct: 53 QMEELLENQDFMKLFIENLSTSLAMNNVLSFLSIAMFGKSSSL-LNDDISNTFLS 106
>U46753-12|AAM98047.2| 539|Caenorhabditis elegans Dishevelled
related protein 1,isoform a protein.
Length = 539
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 148 NLISNSVTGQQGNTAQNTLQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDD 303
N + S+ GQ N N + + GG V + DM+ QV +++ ++
Sbjct: 312 NFLGISIVGQTSNCGDNGIYVANIMKGGAVALDGRIEAGDMILQVNETSFEN 363
>U46753-11|AAM98048.1| 425|Caenorhabditis elegans Dishevelled
related protein 1,isoform b protein.
Length = 425
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 148 NLISNSVTGQQGNTAQNTLQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDD 303
N + S+ GQ N N + + GG V + DM+ QV +++ ++
Sbjct: 180 NFLGISIVGQTSNCGDNGIYVANIMKGGAVALDGRIEAGDMILQVNETSFEN 231
>U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled
related protein 1,isoform c protein.
Length = 623
Score = 27.1 bits (57), Expect = 8.4
Identities = 13/52 (25%), Positives = 24/52 (46%)
Frame = +1
Query: 148 NLISNSVTGQQGNTAQNTLQQIGTVVGGVVDYAKKKSYDDMLRQVQDSTTDD 303
N + S+ GQ N N + + GG V + DM+ QV +++ ++
Sbjct: 312 NFLGISIVGQTSNCGDNGIYVANIMKGGAVALDGRIEAGDMILQVNETSFEN 363
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,849,247
Number of Sequences: 27780
Number of extensions: 198824
Number of successful extensions: 620
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -