BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_A09
(455 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537895-1|CAD97886.1| 336|Homo sapiens hypothetical protein pr... 91 1e-18
BC008053-1|AAH08053.1| 467|Homo sapiens DNA methyltransferase 1... 91 1e-18
BC002855-1|AAH02855.1| 467|Homo sapiens DNA methyltransferase 1... 91 1e-18
AL137200-1|CAB69910.1| 467|Homo sapiens hypothetical protein pr... 91 1e-18
AL035417-5|CAI23197.1| 467|Homo sapiens DNA methyltransferase 1... 91 1e-18
AK021605-1|BAB13854.1| 467|Homo sapiens protein ( Homo sapiens ... 91 1e-18
AF265228-1|AAF87079.1| 467|Homo sapiens DNMT1 associated protei... 91 1e-18
AB037846-1|BAA92663.1| 495|Homo sapiens KIAA1425 protein protein. 91 1e-18
AF442769-1|AAL35361.1| 368|Homo sapiens achaete-scute associate... 30 4.3
Z98258-2|CAM26479.1| 438|Homo sapiens novel protein (FLJ34512) ... 29 5.7
BC042110-1|AAH42110.1| 438|Homo sapiens coiled-coil domain cont... 29 5.7
BC031561-1|AAH31561.1| 187|Homo sapiens CCDC78 protein protein. 29 5.7
BC027941-1|AAH27941.1| 257|Homo sapiens CCDC78 protein protein. 29 5.7
AK091831-1|BAC03757.1| 273|Homo sapiens protein ( Homo sapiens ... 29 5.7
AF000996-1|AAC51843.1| 1079|Homo sapiens ubiquitous TPR motif, Y... 29 5.7
AF000995-1|AAC51842.1| 1240|Homo sapiens ubiquitous TPR motif, Y... 29 5.7
AF000994-1|AAC51841.1| 1347|Homo sapiens ubiquitous TPR motif, Y... 29 5.7
>BX537895-1|CAD97886.1| 336|Homo sapiens hypothetical protein
protein.
Length = 336
Score = 91.5 bits (217), Expect = 1e-18
Identities = 48/111 (43%), Positives = 65/111 (58%)
Frame = +3
Query: 120 RRHDRKLHKKKITTQQRPIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKT 299
RR +RK KKK+ ++ + E +GIKFP+ + GV LRSQRMKLP VGQ+K
Sbjct: 151 RRTERKAPKKKLPQKKEAEKPA---VPETAGIKFPDFKSAGVTLRSQRMKLPSSVGQKKI 207
Query: 300 KAIEQELRIMNIDVAPTPTEAICKHFNELRXXXXXXXXXXXXXXXCEFELQ 452
KA+EQ L + ++++PTPTE + FNELR CE+ELQ
Sbjct: 208 KALEQMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQ 258
>BC008053-1|AAH08053.1| 467|Homo sapiens DNA methyltransferase 1
associated protein 1 protein.
Length = 467
Score = 91.5 bits (217), Expect = 1e-18
Identities = 48/111 (43%), Positives = 65/111 (58%)
Frame = +3
Query: 120 RRHDRKLHKKKITTQQRPIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKT 299
RR +RK KKK+ ++ + E +GIKFP+ + GV LRSQRMKLP VGQ+K
Sbjct: 282 RRTERKAPKKKLPQKKEAEKPA---VPETAGIKFPDFKSAGVTLRSQRMKLPSSVGQKKI 338
Query: 300 KAIEQELRIMNIDVAPTPTEAICKHFNELRXXXXXXXXXXXXXXXCEFELQ 452
KA+EQ L + ++++PTPTE + FNELR CE+ELQ
Sbjct: 339 KALEQMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQ 389
>BC002855-1|AAH02855.1| 467|Homo sapiens DNA methyltransferase 1
associated protein 1 protein.
Length = 467
Score = 91.5 bits (217), Expect = 1e-18
Identities = 48/111 (43%), Positives = 65/111 (58%)
Frame = +3
Query: 120 RRHDRKLHKKKITTQQRPIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKT 299
RR +RK KKK+ ++ + E +GIKFP+ + GV LRSQRMKLP VGQ+K
Sbjct: 282 RRTERKAPKKKLPQKKEAEKPA---VPETAGIKFPDFKSAGVTLRSQRMKLPSSVGQKKI 338
Query: 300 KAIEQELRIMNIDVAPTPTEAICKHFNELRXXXXXXXXXXXXXXXCEFELQ 452
KA+EQ L + ++++PTPTE + FNELR CE+ELQ
Sbjct: 339 KALEQMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQ 389
>AL137200-1|CAB69910.1| 467|Homo sapiens hypothetical protein
protein.
Length = 467
Score = 91.5 bits (217), Expect = 1e-18
Identities = 48/111 (43%), Positives = 65/111 (58%)
Frame = +3
Query: 120 RRHDRKLHKKKITTQQRPIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKT 299
RR +RK KKK+ ++ + E +GIKFP+ + GV LRSQRMKLP VGQ+K
Sbjct: 282 RRTERKAPKKKLPQKKEAEKPA---VPETAGIKFPDFKSAGVTLRSQRMKLPSSVGQKKI 338
Query: 300 KAIEQELRIMNIDVAPTPTEAICKHFNELRXXXXXXXXXXXXXXXCEFELQ 452
KA+EQ L + ++++PTPTE + FNELR CE+ELQ
Sbjct: 339 KALEQMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQ 389
>AL035417-5|CAI23197.1| 467|Homo sapiens DNA methyltransferase 1
associated protein 1 protein.
Length = 467
Score = 91.5 bits (217), Expect = 1e-18
Identities = 48/111 (43%), Positives = 65/111 (58%)
Frame = +3
Query: 120 RRHDRKLHKKKITTQQRPIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKT 299
RR +RK KKK+ ++ + E +GIKFP+ + GV LRSQRMKLP VGQ+K
Sbjct: 282 RRTERKAPKKKLPQKKEAEKPA---VPETAGIKFPDFKSAGVTLRSQRMKLPSSVGQKKI 338
Query: 300 KAIEQELRIMNIDVAPTPTEAICKHFNELRXXXXXXXXXXXXXXXCEFELQ 452
KA+EQ L + ++++PTPTE + FNELR CE+ELQ
Sbjct: 339 KALEQMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQ 389
>AK021605-1|BAB13854.1| 467|Homo sapiens protein ( Homo sapiens
cDNA FLJ11543 fis, clone HEMBA1002816. ).
Length = 467
Score = 91.5 bits (217), Expect = 1e-18
Identities = 48/111 (43%), Positives = 65/111 (58%)
Frame = +3
Query: 120 RRHDRKLHKKKITTQQRPIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKT 299
RR +RK KKK+ ++ + E +GIKFP+ + GV LRSQRMKLP VGQ+K
Sbjct: 282 RRTERKAPKKKLPQKKEAEKPA---VPETAGIKFPDFKSAGVTLRSQRMKLPSSVGQKKI 338
Query: 300 KAIEQELRIMNIDVAPTPTEAICKHFNELRXXXXXXXXXXXXXXXCEFELQ 452
KA+EQ L + ++++PTPTE + FNELR CE+ELQ
Sbjct: 339 KALEQMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQ 389
>AF265228-1|AAF87079.1| 467|Homo sapiens DNMT1 associated protein-1
protein.
Length = 467
Score = 91.5 bits (217), Expect = 1e-18
Identities = 48/111 (43%), Positives = 65/111 (58%)
Frame = +3
Query: 120 RRHDRKLHKKKITTQQRPIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKT 299
RR +RK KKK+ ++ + E +GIKFP+ + GV LRSQRMKLP VGQ+K
Sbjct: 282 RRTERKAPKKKLPQKKEAEKPA---VPETAGIKFPDFKSAGVTLRSQRMKLPSSVGQKKI 338
Query: 300 KAIEQELRIMNIDVAPTPTEAICKHFNELRXXXXXXXXXXXXXXXCEFELQ 452
KA+EQ L + ++++PTPTE + FNELR CE+ELQ
Sbjct: 339 KALEQMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQ 389
>AB037846-1|BAA92663.1| 495|Homo sapiens KIAA1425 protein protein.
Length = 495
Score = 91.5 bits (217), Expect = 1e-18
Identities = 48/111 (43%), Positives = 65/111 (58%)
Frame = +3
Query: 120 RRHDRKLHKKKITTQQRPIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKT 299
RR +RK KKK+ ++ + E +GIKFP+ + GV LRSQRMKLP VGQ+K
Sbjct: 310 RRTERKAPKKKLPQKKEAEKPA---VPETAGIKFPDFKSAGVTLRSQRMKLPSSVGQKKI 366
Query: 300 KAIEQELRIMNIDVAPTPTEAICKHFNELRXXXXXXXXXXXXXXXCEFELQ 452
KA+EQ L + ++++PTPTE + FNELR CE+ELQ
Sbjct: 367 KALEQMLLELGVELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQ 417
>AF442769-1|AAL35361.1| 368|Homo sapiens achaete-scute associated
protein protein.
Length = 368
Score = 29.9 bits (64), Expect = 4.3
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 4/93 (4%)
Frame = +3
Query: 42 NSPXXXXXXXXXEGPSTPSAAAANIARRHDRKLHKKKIT--TQQRPIRTVENVTVEWSGI 215
++P GPS A A + H ++ + + RP R + V +W
Sbjct: 111 SAPSPVAGARSRAGPSRNPALLAMLPVSHAPRVRASSMGPGVEPRPARLAKRVAHDWLRP 170
Query: 216 KFPEARGT--GVWLRSQRMKLPPGVGQRKTKAI 308
P R G W+ + R LPPG+ + A+
Sbjct: 171 WPPPPRPQEGGAWVWAARRVLPPGILRASRTAV 203
>Z98258-2|CAM26479.1| 438|Homo sapiens novel protein (FLJ34512)
protein.
Length = 438
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 171 PIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKTKAIEQELRIMNIDV 341
P R VENV + GT VW S ++PP + K + ++ +++I +
Sbjct: 14 PSRRVENVVLRAKDWLPGAPGGTAVWATSLEAEVPPDLALNKEQQLQISKELVDIQI 70
>BC042110-1|AAH42110.1| 438|Homo sapiens coiled-coil domain
containing 78 protein.
Length = 438
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 171 PIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKTKAIEQELRIMNIDV 341
P R VENV + GT VW S ++PP + K + ++ +++I +
Sbjct: 14 PSRRVENVVLRAKDWLPGAPGGTAVWATSLEAEVPPDLALNKEQQLQISKELVDIQI 70
>BC031561-1|AAH31561.1| 187|Homo sapiens CCDC78 protein protein.
Length = 187
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 171 PIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKTKAIEQELRIMNIDV 341
P R VENV + GT VW S ++PP + K + ++ +++I +
Sbjct: 14 PSRRVENVVLRAKDWLPGAPGGTAVWATSLEAEVPPDLALNKEQQLQISKELVDIQI 70
>BC027941-1|AAH27941.1| 257|Homo sapiens CCDC78 protein protein.
Length = 257
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 171 PIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKTKAIEQELRIMNIDV 341
P R VENV + GT VW S ++PP + K + ++ +++I +
Sbjct: 14 PSRRVENVVLRAKDWLPGAPGGTAVWATSLEAEVPPDLALNKEQQLQISKELVDIQI 70
>AK091831-1|BAC03757.1| 273|Homo sapiens protein ( Homo sapiens
cDNA FLJ34512 fis, clone HLUNG2006570. ).
Length = 273
Score = 29.5 bits (63), Expect = 5.7
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 171 PIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKTKAIEQELRIMNIDV 341
P R VENV + GT VW S ++PP + K + ++ +++I +
Sbjct: 14 PSRRVENVVLRAKDWLPGAPGGTAVWATSLEAEVPPDLALNKEQQLQISKELVDIQI 70
>AF000996-1|AAC51843.1| 1079|Homo sapiens ubiquitous TPR motif, Y
isoform protein.
Length = 1079
Score = 29.5 bits (63), Expect = 5.7
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +3
Query: 156 TTQQRPIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKTKAIEQELRIMNI 335
+T+QR I +V ++ SG+ G G S ++ LP R T I L M++
Sbjct: 779 STEQRSINSVTSLNSPHSGLHTVNGEGLGKSQSSTKVDLPL-ASHRSTSQI---LPSMSV 834
Query: 336 DVAPTPTEAI 365
+ P+ TE +
Sbjct: 835 SICPSSTEVL 844
>AF000995-1|AAC51842.1| 1240|Homo sapiens ubiquitous TPR motif, Y
isoform protein.
Length = 1240
Score = 29.5 bits (63), Expect = 5.7
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +3
Query: 156 TTQQRPIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKTKAIEQELRIMNI 335
+T+QR I +V ++ SG+ G G S ++ LP R T I L M++
Sbjct: 779 STEQRSINSVTSLNSPHSGLHTVNGEGLGKSQSSTKVDLPL-ASHRSTSQI---LPSMSV 834
Query: 336 DVAPTPTEAI 365
+ P+ TE +
Sbjct: 835 SICPSSTEVL 844
>AF000994-1|AAC51841.1| 1347|Homo sapiens ubiquitous TPR motif, Y
isoform protein.
Length = 1347
Score = 29.5 bits (63), Expect = 5.7
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +3
Query: 156 TTQQRPIRTVENVTVEWSGIKFPEARGTGVWLRSQRMKLPPGVGQRKTKAIEQELRIMNI 335
+T+QR I +V ++ SG+ G G S ++ LP R T I L M++
Sbjct: 779 STEQRSINSVTSLNSPHSGLHTVNGEGLGKSQSSTKVDLPL-ASHRSTSQI---LPSMSV 834
Query: 336 DVAPTPTEAI 365
+ P+ TE +
Sbjct: 835 SICPSSTEVL 844
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,800,746
Number of Sequences: 237096
Number of extensions: 1294811
Number of successful extensions: 2807
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2807
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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