Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_A09
(455 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-14|CAD21666.1| 486|Caenorhabditis elegans Hypothetical... 58 4e-09
U23449-2|AAC24297.2| 375|Caenorhabditis elegans Hypothetical pr... 29 1.2
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 28 3.7
AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical ... 28 3.7
AC024763-10|AAK93862.2| 598|Caenorhabditis elegans Hypothetical... 28 3.7
Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical pr... 27 4.9
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical p... 27 6.5
AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein. 27 6.5
U97407-9|AAL02457.2| 1768|Caenorhabditis elegans Hypothetical pr... 27 8.6
EF495354-1|ABP48104.1| 162|Caenorhabditis elegans LON-8 protein. 27 8.6
AL132898-13|CAB60948.2| 152|Caenorhabditis elegans Hypothetical... 27 8.6
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne... 27 8.6
>AL132876-14|CAD21666.1| 486|Caenorhabditis elegans Hypothetical
protein Y105E8A.17 protein.
Length = 486
Score = 57.6 bits (133), Expect = 4e-09
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +3
Query: 84 PSTPSAAAANIARRHDRK-LHKKKITTQQRPIRTVEN-VTVEWSGIKFPEARGTGVWLRS 257
P++PSA A RK + K + T N + + + ++F E + +G R
Sbjct: 259 PASPSAGGIGGAASAKRKNAFRTKAGSISTTATTFFNPLDISVTALRFSEFKSSGAHFRC 318
Query: 258 QRMKLPPGVGQRKTKAIEQELRIMNIDVAPTPTEAICKHFNELRXXXXXXXXXXXXXXXC 437
Q MKLP +GQ+K K IE L +++ P +E I K +N+ R
Sbjct: 319 QEMKLPTNIGQKKLKNIEVVLEKCKMEMNPVASEPIMKTYNDFRSQIMLAQELKSAMQTA 378
Query: 438 EFELQA 455
EFEL++
Sbjct: 379 EFELES 384
>U23449-2|AAC24297.2| 375|Caenorhabditis elegans Hypothetical
protein K06A1.2 protein.
Length = 375
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -1
Query: 239 STSCLRELYTGPFYCHIFNSAYWPLLCSNFFLMQFSIM 126
ST CL P YC + N A W + S+FF++ + ++
Sbjct: 158 STVCLWHKDHEPGYCRL-NGAIWQFMLSHFFILVYHML 194
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 27.9 bits (59), Expect = 3.7
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +2
Query: 182 C*KCDSRMVRYKVPGGKRYWCLASLTEDEATTWC 283
C KC +Y PG +Y L + D+ WC
Sbjct: 26 CQKCQKNEAKYGKPGTCQYCKLNAAFHDQKCVWC 59
>AC026301-5|AAK68894.1| 745|Caenorhabditis elegans Hypothetical
protein Y54F10BM.3 protein.
Length = 745
Score = 27.9 bits (59), Expect = 3.7
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -2
Query: 436 HELRAFFKSNANARSERSSLKCLHIASVGVGATSIFMMRNSCSIALVFL-WPTP 278
H ++ FFK+ + + R S+ + + S+ + SIF + + L F+ WPTP
Sbjct: 102 HRIQQFFKAEHHESTWRDSICSMKLWSILLVTISIFGICHVEPYELSFVDWPTP 155
>AC024763-10|AAK93862.2| 598|Caenorhabditis elegans Hypothetical
protein Y39A3CL.1 protein.
Length = 598
Score = 27.9 bits (59), Expect = 3.7
Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Frame = +3
Query: 84 PSTPSAAAANIARRHDRKLHKKKITTQQRPIRTVEN--VTVEWSGIKFPEARGTGVW-LR 254
PS IA D K K + T+ I+ V + + + G+ + V+ LR
Sbjct: 349 PSAIGTPRFVIAEITDAKARKLQALTEAGDIKFVAEPAIVINFRGVLYVPRLPKSVFRLR 408
Query: 255 SQRMKLPPGVGQRKTKAIEQELRIMNIDV--APTPTEAICKH 374
S M +PPG T E I IDV T EA+ H
Sbjct: 409 SSDMPIPPGTRIFITAHYENRWIIDKIDVDRRDTSVEALVCH 450
>Z75527-8|CAA99778.2| 316|Caenorhabditis elegans Hypothetical
protein C15C8.6 protein.
Length = 316
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Frame = -1
Query: 230 CLRELYTGPFYC--HIFNSAYWPLLCS 156
C+ L + PF H+F +AYWPL+ S
Sbjct: 247 CMSFLSSVPFLSLSHVFLTAYWPLMTS 273
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 27.5 bits (58), Expect = 4.9
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +3
Query: 78 EGPSTPSAAAANIARRHDRKLHKKKITTQQRPI 176
+G S+PS + + DRK+HK+K+ T++R +
Sbjct: 757 QGSSSPSEPSTS----RDRKMHKRKLDTRRRKL 785
>Z27080-5|CAA81605.1| 1247|Caenorhabditis elegans Hypothetical
protein F55H2.6 protein.
Length = 1247
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 93 PSAAAANIARRHDRKLHKKKITTQQRPIRT 182
PS AAN+A++ ++K KK++T+ + T
Sbjct: 828 PSPIAANVAKKANKKNGKKRVTSAWSSLTT 857
>Z22176-14|CAA80143.1| 1247|Caenorhabditis elegans Hypothetical
protein F55H2.6 protein.
Length = 1247
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 93 PSAAAANIARRHDRKLHKKKITTQQRPIRT 182
PS AAN+A++ ++K KK++T+ + T
Sbjct: 828 PSPIAANVAKKANKKNGKKRVTSAWSSLTT 857
>AF101078-1|AAC72406.1| 1247|Caenorhabditis elegans CLU-1 protein.
Length = 1247
Score = 27.1 bits (57), Expect = 6.5
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +3
Query: 93 PSAAAANIARRHDRKLHKKKITTQQRPIRT 182
PS AAN+A++ ++K KK++T+ + T
Sbjct: 828 PSPIAANVAKKANKKNGKKRVTSAWSSLTT 857
>U97407-9|AAL02457.2| 1768|Caenorhabditis elegans Hypothetical
protein C34G6.1 protein.
Length = 1768
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 343 ATSIFMMRNSCSIALVFLWPTPGGSFILCERSQTPV 236
A +++ + N+C A LWP FI CER TPV
Sbjct: 504 AQALYTIANTCVCATKLLWPYL-LEFICCER-YTPV 537
>EF495354-1|ABP48104.1| 162|Caenorhabditis elegans LON-8 protein.
Length = 162
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -2
Query: 325 MRNSCSIALVFLWPTPGGSFILCERSQTPVPLASGNFIPDHSTVTFSTVRIGLCCVVI 152
MRNS A++ + S++L +RSQ V G I D+ T GL C V+
Sbjct: 1 MRNSRFCAILAVISAISVSYVLAQRSQQSVIADLGKLIVDNCPPMLCT---GLDCAVV 55
>AL132898-13|CAB60948.2| 152|Caenorhabditis elegans Hypothetical
protein Y59A8B.20 protein.
Length = 152
Score = 26.6 bits (56), Expect = 8.6
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -2
Query: 325 MRNSCSIALVFLWPTPGGSFILCERSQTPVPLASGNFIPDHSTVTFSTVRIGLCCVVI 152
MRNS A++ + S++L +RSQ V G I D+ T GL C V+
Sbjct: 1 MRNSRFCAILAVISAISVSYVLAQRSQQSVIADLGKLIVDNCPPMLCT---GLDCAVV 55
>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
neurexin-like protein 1 protein.
Length = 1655
Score = 26.6 bits (56), Expect = 8.6
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 322 RNSCSIALVFLWPTPGGSFILCERSQTPVP 233
R S SI L+ ++P GSFIL + ++P+P
Sbjct: 1087 RRSPSIFLMLIFPD--GSFILAPKYESPIP 1114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,951,251
Number of Sequences: 27780
Number of extensions: 197910
Number of successful extensions: 500
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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