Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_A05
(373 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1343 - 25905475-25905678,25907025-25907167,25907273-259073... 62 1e-10
08_02_1539 - 27690412-27690588,27690694-27690834,27691493-276915... 30 0.67
05_04_0229 + 19235663-19236166 29 1.2
05_01_0534 - 4601844-4602297,4602689-4602847,4602947-4603514,460... 29 1.5
04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202 29 1.5
03_02_0035 + 5176365-5176501,5176676-5176775,5176852-5176887,517... 29 1.5
12_02_1199 + 26928685-26929671 28 2.0
03_05_0859 - 28329837-28329919,28330062-28330131,28330498-283305... 28 2.7
03_05_0027 + 19987982-19988254 28 2.7
02_01_0151 + 1067067-1067222,1067586-1067690,1067904-1067990,106... 28 2.7
03_02_0456 - 8634618-8635062,8635155-8635322,8635414-8635698,863... 27 3.6
02_03_0119 - 15457691-15458687,15458768-15458934,15459019-15459123 27 3.6
08_02_0603 + 19208177-19210033,19210581-19210618,19210937-192110... 27 4.7
03_02_1016 + 13228113-13228964 27 4.7
02_04_0035 + 19078267-19078479,19078588-19078674,19079792-190798... 27 4.7
09_04_0389 + 17239182-17239316,17240246-17240878 27 6.2
02_05_0203 + 26717246-26717354,26718797-26719575 27 6.2
12_01_0153 - 1172080-1172450,1172493-1172592,1173777-1174691 26 8.2
07_01_0593 + 4417753-4417759,4418240-4419698,4419819-4421301,442... 26 8.2
06_01_0691 - 5040280-5040801,5041439-5041529,5042368-5042568,504... 26 8.2
04_04_1573 - 34533973-34535595 26 8.2
03_05_0292 + 22846273-22846377,22847161-22847823 26 8.2
03_02_0752 - 10922456-10922644,10922719-10922796,10922888-109230... 26 8.2
03_02_0687 + 10413338-10413430,10413538-10413934,10414040-104141... 26 8.2
>07_03_1343 -
25905475-25905678,25907025-25907167,25907273-25907366,
25907526-25907687,25907884-25907952,25908631-25908843,
25909054-25909113,25909294-25909382,25909745-25910063
Length = 450
Score = 62.5 bits (145), Expect = 1e-10
Identities = 26/63 (41%), Positives = 39/63 (61%)
Frame = +1
Query: 181 TRMKNIEMIELGRHRIRPWYFAPYPQELVNLSCIYICEFCLTYRKSNKCPERHLD*MQVK 360
T++KNI IELGR+ I WYF+P+P E + ++ CEFCL + K + +RH+ +K
Sbjct: 174 TKVKNIAKIELGRYEIDTWYFSPFPPEYNDSPKLFFCEFCLNFMKRKEQLQRHMKKCDLK 233
Query: 361 TSP 369
P
Sbjct: 234 HPP 236
>08_02_1539 -
27690412-27690588,27690694-27690834,27691493-27691588,
27691694-27691786,27691909-27692103,27692340-27692438,
27692527-27692753,27692841-27692973
Length = 386
Score = 29.9 bits (64), Expect = 0.67
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +2
Query: 101 SLAARPRQRLGPASRAACSRTGTTR 175
SLAA P Q PA RAA SR+ T R
Sbjct: 6 SLAALPSQLASPARRAALSRSATAR 30
>05_04_0229 + 19235663-19236166
Length = 167
Score = 29.1 bits (62), Expect = 1.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 55 AELSVPPGEGTESENIASGAATPTARPRQSGSMLAHGHDALVTRMKNI 198
AE+++ E +A GA TP ARPR + D LV ++ I
Sbjct: 88 AEVALVEAEAVALAEVADGAVTPFARPRWDKFVRQFFMDRLVLDLRGI 135
>05_01_0534 -
4601844-4602297,4602689-4602847,4602947-4603514,
4604853-4605246
Length = 524
Score = 28.7 bits (61), Expect = 1.5
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 55 AELSVPPGEGTESE-NIASGAATPTARPRQSGSMLAHGHDALVTR--MKNIEMIELGRHR 225
A+ S P T+S +AS A + P Q S +++G + + N+E+++ RHR
Sbjct: 61 AQPSSVPVRKTDSRCTVASSARSAAGVPHQKRSSVSNGWGPRERQNSLSNMELLDSARHR 120
Query: 226 IRPWYFAPYP 255
+ P P
Sbjct: 121 VGDHVVLPLP 130
>04_04_1547 - 34306836-34308713,34308938-34309048,34310056-34310202
Length = 711
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 268 NLSCIYICEFCLTYRKSNKCPERHLD*MQVKTSPR 372
N C+Y LT +K N+C RH D + +PR
Sbjct: 34 NTDCVYFLASPLTCKKGNECDFRHSD--NARMNPR 66
>03_02_0035 +
5176365-5176501,5176676-5176775,5176852-5176887,
5177081-5177131,5177323-5177446,5177955-5178080,
5178292-5178449
Length = 243
Score = 28.7 bits (61), Expect = 1.5
Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = -3
Query: 119 VAAPLAIFSLSVP---SPGGTDSSASFSTELAFL 27
+A PL+I+ LS+P PGGT+ S SF A L
Sbjct: 190 LAVPLSIYVLSLPLPYIPGGTNLSTSFLVGAAIL 223
>12_02_1199 + 26928685-26929671
Length = 328
Score = 28.3 bits (60), Expect = 2.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -3
Query: 158 ASMLPDWRGRAVGVAAPLAIFSLSVPSPGGTDSSASFSTELAFLF 24
A+ LPD RGR GV +P+ + + P P DS ++ ++
Sbjct: 161 AAELPDLRGR--GVVSPIREAAAATPRPSSADSDVGSEVSVSSIW 203
>03_05_0859 -
28329837-28329919,28330062-28330131,28330498-28330549,
28330671-28330798,28331283-28331483,28332183-28332317,
28333116-28333275,28333824-28334019,28334070-28334252,
28334382-28334507,28335090-28335214,28335389-28335541,
28337267-28337472
Length = 605
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 134 GRAVGVAAPLAIFSLSVPSPGGTDSSASFSTELAF 30
G AV VAA + FSL + + GG S+ LAF
Sbjct: 147 GSAVAVAAGIVDFSLGIDTIGGVRVPGSYCGVLAF 181
>03_05_0027 + 19987982-19988254
Length = 90
Score = 27.9 bits (59), Expect = 2.7
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -2
Query: 150 AARLAGP-SRWRGRAASDILTFSTFTRWHR 64
AAR+ G WRGR SD++ TR HR
Sbjct: 54 AARVEGDWDLWRGRRCSDLVADGDSTRLHR 83
>02_01_0151 +
1067067-1067222,1067586-1067690,1067904-1067990,
1068071-1068121,1068265-1068291,1068292-1068385,
1068610-1068845
Length = 251
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 55 AELSVPPGEGTESENIASGAATPTARPRQSGSMLAHGHDALVTRMKNIE 201
A S P G+ + A T ++ G+ AH HD V ++NIE
Sbjct: 7 ASTSTPEGDSGQHAAAAPPRMTTVSKHYFGGASSAHNHDLRVDIIENIE 55
>03_02_0456 -
8634618-8635062,8635155-8635322,8635414-8635698,
8635793-8636178
Length = 427
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +1
Query: 133 PRQSGSMLAHGHDALVTRMKNIEMIELGRHRIRPW 237
PR +GS L HG V + E IE RH P+
Sbjct: 67 PRDNGSRLRHGRLEFVGEVFGPESIEFDRHGRGPY 101
>02_03_0119 - 15457691-15458687,15458768-15458934,15459019-15459123
Length = 422
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +1
Query: 4 LQKKMNRKRKANSVENEAELSVPPGEGTESENIASGAATPTARPRQSGSMLA 159
L+ + R++++ AE S PP G I A+P RP S + ++
Sbjct: 177 LRARRAREKQSQRGTARAEASTPPSRGRVRSRIQFKPASPLGRPSVSANRVS 228
>08_02_0603 +
19208177-19210033,19210581-19210618,19210937-19211059,
19211471-19211852
Length = 799
Score = 27.1 bits (57), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 176 SASCPCASMLPDWRGRAVGVAAPLAIFSLSVPSPGGTDSSASFSTELA 33
+A P AS++PD VAA A S S SPG ++SF + A
Sbjct: 49 TAQPPAASVVPDLYHALAAVAAAAASASASA-SPGDPHPASSFLCDAA 95
>03_02_1016 + 13228113-13228964
Length = 283
Score = 27.1 bits (57), Expect = 4.7
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +1
Query: 76 GEGTESENIASGAATPTARPRQSGSM--LAHGHDALV 180
G+ + +SG P R R + M L HGHDAL+
Sbjct: 224 GKHAAARRCSSGNHQPVPRARSTTGMDSLGHGHDALM 260
>02_04_0035 +
19078267-19078479,19078588-19078674,19079792-19079863,
19080338-19080526,19080599-19080718,19081348-19081430,
19081518-19081773,19081878-19082199,19086355-19086548,
19087135-19087227,19089327-19089497,19089580-19089699,
19090303-19090373,19090608-19090675,19091097-19091191
Length = 717
Score = 27.1 bits (57), Expect = 4.7
Identities = 12/42 (28%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = -3
Query: 278 QDKLTNSCGYGAKYHGLILCLPNSIISIF-FIRVTSASCPCA 156
++ L++ C HG +C+ +S++S+F F+R+ +A C+
Sbjct: 277 KNTLSSCCFNVILIHGSDICILHSVLSVFAFLRLAAAIWMCS 318
>09_04_0389 + 17239182-17239316,17240246-17240878
Length = 255
Score = 26.6 bits (56), Expect = 6.2
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 29 GRLILSRMRQNYLCHLVKVLKVRISLAARPRQRLGPA 139
GR++L R + +L +++ K R+ + +R GPA
Sbjct: 157 GRVLLGRRQTRHLVEVLESAKTRVPVLTAAPRRSGPA 193
>02_05_0203 + 26717246-26717354,26718797-26719575
Length = 295
Score = 26.6 bits (56), Expect = 6.2
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +1
Query: 4 LQKKMNRKRKANSVENEAEL---SVPPGEGTESENIASGAAT 120
L K++N R A E E SVPP + ++EN A T
Sbjct: 127 LGKRINHDRTATVTRKEMETRPKSVPPNQSNQAENAAWSVET 168
>12_01_0153 - 1172080-1172450,1172493-1172592,1173777-1174691
Length = 461
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 140 WRGRAVGVAAPLAIFSLSVPSPGGTDSSASFSTELAFL 27
WR G+ P A FS +V TD++A+ + EL+F+
Sbjct: 33 WRPADTGLPVPAADFSAAVLESAVTDTTAA-AKELSFV 69
>07_01_0593 +
4417753-4417759,4418240-4419698,4419819-4421301,
4421378-4421419,4421420-4421584,4421669-4421864,
4421955-4422066,4422154-4422301,4422417-4422614,
4422710-4422866,4422882-4422988,4423084-4423245,
4423314-4423562,4423676-4423810
Length = 1539
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +2
Query: 38 ILSRMRQNYLCHLVKVLKVRISLAAR--PRQRLGPASRAACSRTGTTR 175
+L +M Q LV KV++ P +GPASR R TTR
Sbjct: 588 LLMKMEQRRHTKLVMKKKVQVMRGENLNPSATMGPASRRKVMRATTTR 635
>06_01_0691 -
5040280-5040801,5041439-5041529,5042368-5042568,
5042649-5046148
Length = 1437
Score = 26.2 bits (55), Expect = 8.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -3
Query: 143 DWRGRAVGVAAPLAIFSLSVPSPGGTDSSASFSTELAFLFRFI 15
DWR R G+A + + P D + ELAF+ R +
Sbjct: 119 DWRARVAGLADRVLALAPGAPVGDVLDGARPAPDELAFVVRAV 161
>04_04_1573 - 34533973-34535595
Length = 540
Score = 26.2 bits (55), Expect = 8.2
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 8/55 (14%)
Frame = -1
Query: 340 GVSPDTCYFSYMSSRIHIYKCKIS*PIPVDTVRSTMA--------LSYACLILSF 200
GV+PD C FS++ +H+Y + P +V M+ + YA L+ SF
Sbjct: 120 GVAPDRCAFSFL---LHVYSSHLHLPSAAHSVLVWMSRLGLPPTPIDYADLVFSF 171
>03_05_0292 + 22846273-22846377,22847161-22847823
Length = 255
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +1
Query: 88 ESENIASGAATPTARPRQSGSMLAHGHDALVTRMKNI 198
E +A GA TP ARPR + D LV ++ I
Sbjct: 202 EFAEVADGAVTPFARPRWDEFVCQFFADQLVPDLRGI 238
>03_02_0752 -
10922456-10922644,10922719-10922796,10922888-10923016,
10923105-10923152,10923243-10923333,10923517-10923648,
10923869-10924086,10925121-10925271,10925360-10926009,
10926715-10926786,10926938-10926985,10927105-10927242,
10927750-10927756,10928064-10928212
Length = 699
Score = 26.2 bits (55), Expect = 8.2
Identities = 12/51 (23%), Positives = 25/51 (49%)
Frame = +1
Query: 19 NRKRKANSVENEAELSVPPGEGTESENIASGAATPTARPRQSGSMLAHGHD 171
+R + NS + ++ PPG+ +E+EN++ T R+ + +D
Sbjct: 195 SRSKITNSEYADKSVTPPPGDASETENVSPDMPLRTLGRRKISKHASKSND 245
>03_02_0687 +
10413338-10413430,10413538-10413934,10414040-10414168,
10414370-10414517,10414647-10415925
Length = 681
Score = 26.2 bits (55), Expect = 8.2
Identities = 14/34 (41%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -2
Query: 228 YPMPA*FYHFYILHTSNQRVVPVRE-HAARLAGP 130
+PM YHFY+L T PVR+ H L P
Sbjct: 580 HPMHIHGYHFYVLATGFGNYDPVRDAHKFNLVDP 613
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,078,104
Number of Sequences: 37544
Number of extensions: 228797
Number of successful extensions: 812
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 588739508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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