Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_A01
(342 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_05_0129 + 18431820-18432224 31 0.18
01_01_0056 + 422141-422379,422524-422620,422697-422774,422871-42... 29 0.95
06_02_0163 - 12488622-12488717,12488744-12488844,12490765-12490924 27 3.9
04_04_1376 + 33058306-33059763,33059851-33059991,33060594-330606... 27 3.9
11_05_0059 - 18724619-18725053 26 6.7
10_08_0359 - 17167829-17169595,17169976-17169996 26 6.7
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278... 26 6.7
10_07_0175 - 13817381-13817782,13817878-13818131,13818308-13818335 26 6.7
10_07_0167 + 13756200-13756227,13756401-13756561,13756754-13757317 26 6.7
09_04_0184 - 15393441-15393642,15393789-15393940,15394047-153942... 26 6.7
08_02_1130 + 24517319-24518149,24519374-24519868,24519954-245201... 26 6.7
07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893 26 6.7
07_01_1106 - 10187609-10190041,10190292-10191932 26 6.7
11_01_0498 - 3828516-3829058 26 8.9
04_01_0483 + 6343599-6343778,6343886-6344011,6344096-6344173,634... 26 8.9
03_05_1164 - 30863063-30863095,30863308-30864777 26 8.9
02_04_0056 + 19313422-19313967,19314035-19314168,19314263-193143... 26 8.9
01_06_1354 - 36599904-36600643,36600851-36601352 26 8.9
01_03_0311 + 14905995-14906393,14906982-14907009,14907893-149079... 26 8.9
>01_05_0129 + 18431820-18432224
Length = 134
Score = 31.5 bits (68), Expect = 0.18
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 139 RRRSRPEICPPFPIYHQPTLLVVVSNICSRT 231
RRR RP PP P H P V+V+ +RT
Sbjct: 4 RRRQRPSSSPPLPPEHSPLPSVIVATARART 34
>01_01_0056 +
422141-422379,422524-422620,422697-422774,422871-422930,
423019-423123,423743-423856,424145-424186,424380-424496,
424568-424755,425502-425785,425869-425990,426118-426160,
426265-426356,427331-427379,427623-427693,427793-427912,
428586-428674,429266-429311,429926-429973
Length = 667
Score = 29.1 bits (62), Expect = 0.95
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -1
Query: 153 SRTPSRINHGRCYETGSLYQQQTI 82
SRTPS ++H +E+G QQTI
Sbjct: 16 SRTPSALHHNGAFESGEPSMQQTI 39
>06_02_0163 - 12488622-12488717,12488744-12488844,12490765-12490924
Length = 118
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 300 CRPDYSHSC*RNQCERRSLMHRSCP*TYIRDHHQQC 193
C P +S N+C R S+ + P ++ D H QC
Sbjct: 6 CAPAIENS--PNKCNRGSIYQHAIPPWFLTDPHHQC 39
>04_04_1376 +
33058306-33059763,33059851-33059991,33060594-33060644,
33061094-33061171,33061245-33061388,33061871-33062002
Length = 667
Score = 27.1 bits (57), Expect = 3.9
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +3
Query: 60 HIPGIGDKLSVAGKVNLFHNNDHDLSAKAFATRNMPTISHLPSTN--TVGGGLEYMFKDK 233
+I G+ + S + H ND A ++ N ++LPS N V L+ +
Sbjct: 223 NIEGVNGQCSAGASTSFSHRNDSIFHNIASSSHNPSPSTNLPSPNCLLVPSTLDEQL-PR 281
Query: 234 IGASASAAHTDFFNKN--DYNLGGKLNLFKTPSTSL 335
GA+ + + ++ + + N GG F+ P TSL
Sbjct: 282 YGATTAGLSSSSYDPSGGNNNSGGSQRSFR-PRTSL 316
>11_05_0059 - 18724619-18725053
Length = 144
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 191 QHCWWWSRIYVQGQDR 238
+HC WWSR +G DR
Sbjct: 27 RHCCWWSRGRSRGGDR 42
>10_08_0359 - 17167829-17169595,17169976-17169996
Length = 595
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1
Query: 168 WAYFWSRTPSRINHGRCYETG 106
W YF TP G+CYE G
Sbjct: 359 WGYFPDNTPEPHIPGKCYEGG 379
>10_07_0176 -
13826764-13827064,13827271-13827377,13827474-13827836,
13827912-13828079,13828153-13828374,13828784-13829023,
13829640-13829719,13829853-13830018,13830720-13830783,
13830861-13830962,13831085-13831227,13831370-13831474,
13831551-13831706,13832125-13832241,13832315-13832392,
13832466-13832550,13833334-13833455,13833546-13833611,
13835190-13835284,13835427-13835523,13835873-13835983,
13836083-13836164,13836292-13836353,13836620-13836685,
13838002-13838232
Length = 1142
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +3
Query: 111 FHNNDHDLSAKAFATRNMPTISHLPSTNTVGGGLEYMFKDKIG 239
F NND + A N P ++ + N G +EY+F DK G
Sbjct: 375 FINNDLHMY---HAESNTPALARTSNLNEELGQVEYIFSDKTG 414
>10_07_0175 - 13817381-13817782,13817878-13818131,13818308-13818335
Length = 227
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 207 HHQQCWLMVNGKWWAYFWSR 148
HH++C +NGK+ F SR
Sbjct: 32 HHEECAKQINGKYHTNFTSR 51
>10_07_0167 + 13756200-13756227,13756401-13756561,13756754-13757317
Length = 250
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 207 HHQQCWLMVNGKWWAYFWSR 148
HH++C +NGK+ F SR
Sbjct: 33 HHEECAKQINGKYHTNFTSR 52
>09_04_0184 -
15393441-15393642,15393789-15393940,15394047-15394208,
15394372-15394585,15395017-15395297
Length = 336
Score = 26.2 bits (55), Expect = 6.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 187 DGKWEMVGIFLVANAFADKSWSLL 116
D W GI+L+ NAF W +L
Sbjct: 141 DDDWVKGGIYLIGNAFCVSIWYIL 164
>08_02_1130 +
24517319-24518149,24519374-24519868,24519954-24520179,
24520267-24520291,24520925-24521234,24521328-24521888
Length = 815
Score = 26.2 bits (55), Expect = 6.7
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 207 HHQQCWLMVNGKWWAYFWSR 148
HH++C +NGK+ F SR
Sbjct: 564 HHEECAKQINGKYHTNFTSR 583
>07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893
Length = 342
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 175 PIYHQPTLLVVVSNICSRTRSVHQRAPLTLISL 273
P H+P VV + C+RT +V A L L S+
Sbjct: 123 PATHKPLAEVVAAAACARTPAVFSDAELILSSI 155
>07_01_1106 - 10187609-10190041,10190292-10191932
Length = 1357
Score = 26.2 bits (55), Expect = 6.7
Identities = 7/21 (33%), Positives = 11/21 (52%)
Frame = -1
Query: 174 KWWAYFWSRTPSRINHGRCYE 112
+WW Y W T + RC++
Sbjct: 533 RWWKYNWVHTQCNLKSYRCHQ 553
>11_01_0498 - 3828516-3829058
Length = 180
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 200 WWWSRIYVQGQDRCISERRS 259
WWW R + D C RRS
Sbjct: 77 WWWRRRWWWRDDGCAGARRS 96
>04_01_0483 +
6343599-6343778,6343886-6344011,6344096-6344173,
6344859-6344984,6345253-6345354,6345425-6345571,
6345861-6345984,6346992-6347152
Length = 347
Score = 25.8 bits (54), Expect = 8.9
Identities = 7/16 (43%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = +2
Query: 185 INQHCWWWSR-IYVQG 229
+ CWWWSR ++++G
Sbjct: 300 LEMDCWWWSRQLWLEG 315
>03_05_1164 - 30863063-30863095,30863308-30864777
Length = 500
Score = 25.8 bits (54), Expect = 8.9
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 104 EPVS*QRP*FIREGVRDQKYAHHFPFTINQHCWW 205
EP + P F EG ++ HH FT H +W
Sbjct: 232 EPWHLKEPVF-PEGKTPSEFRHHVKFTSTSHAFW 264
>02_04_0056 +
19313422-19313967,19314035-19314168,19314263-19314398,
19314870-19314923,19314995-19315135,19315220-19315546,
19315647-19315916,19316080-19316226,19316890-19317045,
19317223-19317290,19318210-19318309,19318696-19318985,
19319074-19319274,19319840-19319902,19320263-19320356,
19320964-19321035,19321979-19322077,19322254-19322376
Length = 1006
Score = 25.8 bits (54), Expect = 8.9
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = -3
Query: 163 IFLVANAF-ADKSWSLL*NRFTLPATDNLSPIPGI*VFVRVAPWR 32
I L A A AD+ W L P +NL I + F+RV PWR
Sbjct: 616 ISLAAAALTADRRWCLT----GTPIQNNLEDIYSLFRFLRVEPWR 656
>01_06_1354 - 36599904-36600643,36600851-36601352
Length = 413
Score = 25.8 bits (54), Expect = 8.9
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 159 FWSRTPSRINHGRCYETGSLYQQQTIYLQFQEYE 58
F + P++ HG C G L + + +F E+E
Sbjct: 340 FAAEVPNKCGHGCCSSHGQLRKNSLLGPEFNEFE 373
>01_03_0311 +
14905995-14906393,14906982-14907009,14907893-14907930,
14908741-14908878,14909180-14909356,14909497-14909550,
14909713-14909813,14910445-14910739
Length = 409
Score = 25.8 bits (54), Expect = 8.9
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = -1
Query: 195 CWLMVNGKWWAYF 157
CW +G WW Y+
Sbjct: 311 CWTGTSGDWWVYY 323
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,346,873
Number of Sequences: 37544
Number of extensions: 215596
Number of successful extensions: 588
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 588
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 482105440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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