Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_P23
         (625 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    26   0.29 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.52 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      23   2.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   4.8  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.3  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   6.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.4  

>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 198 PILGAKEDVAPTSPPT 151
           PIL  K  V+PT+PPT
Sbjct: 85  PILAEKVSVSPTTPPT 100


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
 Frame = +1

Query: 406 KYHNGRCHWHCQDNASSFNGTLPLRLSKRNPW----HSTICW 519
           K  NGRC   C   A  F+G     L   NPW     ST CW
Sbjct: 496 KRGNGRCDEECNTYACEFDGN-DCSLG-INPWANCTASTRCW 535


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 403 WKYHNGRCHWHCQDNASS 456
           W Y+  R H HC   + S
Sbjct: 84  WVYYESRAHIHCSVKSES 101


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = -2

Query: 249 VALAMSSPTFFGERPRGPILGAKEDVAPTSPPT 151
           + + +S+PT FG R     L    DV P +  T
Sbjct: 166 IGVQISAPTIFGARHGLETLSQLMDVYPNNDGT 198


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -2

Query: 423 SSIVIFPLCLMFFCFL 376
           S+ +IF + L+F+C L
Sbjct: 217 SAFIIFTIHLLFYCVL 232


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +3

Query: 171 LRPPWLLKSVPLVSPQKRLVMTSLK 245
           +RPP L  + P+ +PQ ++  T  K
Sbjct: 101 IRPPILHDTQPMCNPQLQVPRTFFK 125


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = -2

Query: 573  PLLKSSMMSWGALPSTVHPTDCAVP 499
            PLL+S     G +P      DC  P
Sbjct: 982  PLLRSLNRGLGLIPDNPSREDCTKP 1006


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,175
Number of Sequences: 336
Number of extensions: 3222
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)