Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_P18
         (424 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442769-1|AAL35361.1|  368|Homo sapiens achaete-scute associate...    30   3.7  
AK222642-1|BAD96362.1|  185|Homo sapiens hypothetical protein DK...    29   4.9  

>AF442769-1|AAL35361.1|  368|Homo sapiens achaete-scute associated
           protein protein.
          Length = 368

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 178 WMEPARPRPKIAPTTGGAWLWA 113
           W+ P  P P+  P  GGAW+WA
Sbjct: 167 WLRPWPPPPR--PQEGGAWVWA 186


>AK222642-1|BAD96362.1|  185|Homo sapiens hypothetical protein
           DKFZp564D0478 variant protein.
          Length = 185

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +3

Query: 219 YIVDDRSEVFSELKKYWKLDDTTIFLTSKDA 311
           Y V + +  F E  KYWKLD   ++ +  +A
Sbjct: 67  YFVSEDNMAFGEPAKYWKLDPAQVYASGPNA 97


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,657,169
Number of Sequences: 237096
Number of extensions: 1306136
Number of successful extensions: 6666
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6666
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)