Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_P18
         (424 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92972-7|CAB07486.1|  402|Caenorhabditis elegans Hypothetical pr...    27   4.2  
AC006625-7|AAK68274.1|  346|Caenorhabditis elegans Hypothetical ...    27   4.2  
U80029-15|AAB37594.2|  642|Caenorhabditis elegans Hypothetical p...    27   7.3  
Z80216-1|CAB02287.2|  338|Caenorhabditis elegans Hypothetical pr...    26   9.7  
U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical pr...    26   9.7  
U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical pr...    26   9.7  

>Z92972-7|CAB07486.1|  402|Caenorhabditis elegans Hypothetical
           protein T19C9.8 protein.
          Length = 402

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 13/48 (27%), Positives = 26/48 (54%)
 Frame = -1

Query: 343 DMYFLIXITRAASLEVKNMVVSSSFQYFFNSENTSLRSSTIYLRTIRG 200
           +MY +  ++   +   +    S S +Y+F+SENT+ +   I +  I+G
Sbjct: 336 NMYNITNLSPTGNYTFEITSYSMSVEYYFDSENTTSKGIYIDVELIKG 383


>AC006625-7|AAK68274.1|  346|Caenorhabditis elegans Hypothetical
           protein C55B7.3 protein.
          Length = 346

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 14/54 (25%), Positives = 30/54 (55%)
 Frame = +3

Query: 102 LNHKAQSQAPPVVGAIFGLGRAGSIHLSNIIHNPRIVLKYIVDDRSEVFSELKK 263
           L +   S+ P VV    G+GR GS+ +   I + +++   I+DD  ++  ++++
Sbjct: 244 LENARPSKGPIVVHCSAGIGRTGSVVMLEYIMD-QLLAGQIIDDGEKILVKIRE 296


>U80029-15|AAB37594.2|  642|Caenorhabditis elegans Hypothetical
           protein T20D4.3 protein.
          Length = 642

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +3

Query: 168 GSIHLSNIIHNPRIVLKYIVDDRSEVFS-ELKKYWKLDDTTIFLTSKDA 311
           G +++   +H P  VLK  V  R  V S  ++ YWK D+ +  LT+  A
Sbjct: 375 GKLYIEITLHRPIKVLKTDVKGRKSVESFSIEVYWK-DEPSYPLTTTTA 422


>Z80216-1|CAB02287.2|  338|Caenorhabditis elegans Hypothetical
           protein F10G8.1 protein.
          Length = 338

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 14/52 (26%), Positives = 28/52 (53%)
 Frame = +3

Query: 102 LNHKAQSQAPPVVGAIFGLGRAGSIHLSNIIHNPRIVLKYIVDDRSEVFSEL 257
           L +   S+ P VV    G+GR GS+ +   I + +++   I+DD  ++  ++
Sbjct: 236 LENARPSKGPIVVHCSAGIGRTGSVVMLEYIMD-QLLAGQIIDDGEKILVKI 286


>U58749-5|AAU05597.1| 1551|Caenorhabditis elegans Hypothetical
           protein B0496.3a protein.
          Length = 1551

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 305 GCSACYXDKEVHVVFIGSPTWTHHEIVVNSIANNKDVXC 421
           G S  + DK +   F GSP +   EI+  +     +V C
Sbjct: 218 GLSNYFADKNLLTTFCGSPLYASPEIINGTPYKGPEVDC 256


>U58749-4|AAU05598.1| 1592|Caenorhabditis elegans Hypothetical
           protein B0496.3b protein.
          Length = 1592

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = +2

Query: 305 GCSACYXDKEVHVVFIGSPTWTHHEIVVNSIANNKDVXC 421
           G S  + DK +   F GSP +   EI+  +     +V C
Sbjct: 218 GLSNYFADKNLLTTFCGSPLYASPEIINGTPYKGPEVDC 256


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,139,222
Number of Sequences: 27780
Number of extensions: 198768
Number of successful extensions: 570
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)