Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_P17
         (526 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    22   4.4  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    22   4.4  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    22   4.4  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    22   4.4  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   7.7  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   7.7  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   7.7  

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 144 NYKMNHNAKPHNNKL 100
           NYK N+N   +N KL
Sbjct: 94  NYKYNYNNNNYNKKL 108


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 144 NYKMNHNAKPHNNKL 100
           NYK N+N   +N KL
Sbjct: 94  NYKYNYNNNNYNKKL 108


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 144 NYKMNHNAKPHNNKL 100
           NYK N+N   +N KL
Sbjct: 94  NYKYNYNNNNYNKKL 108


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 144 NYKMNHNAKPHNNKL 100
           NYK N+N   +N KL
Sbjct: 94  NYKYNYNNNNYNKKL 108


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 144 NYKMNHNAKPHNNKLTN 94
           NYK N+N   +NN   N
Sbjct: 93  NYKYNYNNNNYNNNNYN 109


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 144 NYKMNHNAKPHNNKLTN 94
           NYK N+N   +NN   N
Sbjct: 93  NYKYNYNNNNYNNNNYN 109


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 144 NYKMNHNAKPHNNKLTN 94
           NYK N+N   +NN   N
Sbjct: 328 NYKYNYNNNNYNNNNYN 344


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,196
Number of Sequences: 438
Number of extensions: 2707
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)