Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_P15
         (402 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   4.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   6.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   6.0  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.0  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 389 QVTPLGPPGTPRPHRSA 339
           Q  P GPP  P P  S+
Sbjct: 69  QTAPHGPPYAPHPSLSS 85


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 399 SRPTSDTSGPTGHTATSP 346
           S P+SDTS    H+  SP
Sbjct: 66  SSPSSDTSQDLQHSYQSP 83


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 5/14 (35%), Positives = 13/14 (92%)
 Frame = -2

Query: 227 RNHLPIVRSLPSRH 186
           R +LP+++++PS++
Sbjct: 443 RKYLPVLKNMPSQY 456


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -1

Query: 159 VSSPTAGGGSPPK 121
           + +P +GGG+P K
Sbjct: 777 IGAPASGGGTPGK 789


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,731
Number of Sequences: 336
Number of extensions: 1558
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8646818
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)