Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_P15
(402 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 28 0.47
SPBC27.08c |sua1|SPBC28F2.01c|sulfate adenylyltransferase |Schiz... 28 0.47
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 28 0.62
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 27 1.1
SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase Srk1|Schizo... 27 1.4
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 26 1.9
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 26 1.9
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 2.5
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 25 4.4
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 4.4
SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 25 4.4
SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces p... 25 4.4
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 25 5.8
SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces... 24 7.7
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 24 7.7
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 28.3 bits (60), Expect = 0.47
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 173 HSSYGAAKAMSELLVNDYARRGWADARAVRLPTVSVRGGAPNLAVTSFASGIVREPLNGE 352
H S A+ +S LL + + A + TV V G PN+ +S + +V NG
Sbjct: 241 HQSASASSTISNLLKS--LKSYSAKKKLKSSLTVGVIG-YPNVGKSSVINALVNRSANGR 297
Query: 353 VAVCPVG 373
A CP G
Sbjct: 298 SAPCPAG 304
>SPBC27.08c |sua1|SPBC28F2.01c|sulfate adenylyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 28.3 bits (60), Expect = 0.47
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -3
Query: 370 HRAHRDLTVQRLAHYAARERRHCQVG 293
HRAHR+LTV+ + AR H VG
Sbjct: 199 HRAHRELTVRAAKQHGARVLIHPVVG 224
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 27.9 bits (59), Expect = 0.62
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +2
Query: 38 FDATRALLEAARRKAPNLRFVFASTVGVFGGEPPPAVGELTVTAPHSSYGAAKAMSELLV 217
F+A + +++A+ +A + G P L+ A +SS A +S +
Sbjct: 178 FEAWKRMMKASSGEAGAGNVITPGVTSTTGA--PSGKASLSRAASNSSTSARAGIS--VD 233
Query: 218 NDYARRGWADARAVRLPTVSVRGGAP 295
+ + +R A A A +P+VS GG P
Sbjct: 234 SLFGKRSAAQAMATVVPSVSTPGGTP 259
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 27.1 bits (57), Expect = 1.1
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -1
Query: 204 LIAFAAPYELCGAVTVSSPTAGGGSPPKTPTVLANTNLK 88
L + A Y VT+SSPTA GGS + V+ K
Sbjct: 287 LDSVAQKYAARNGVTLSSPTAEGGSSSGSAAVIDEETFK 325
>SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase
Srk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 580
Score = 26.6 bits (56), Expect = 1.4
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = -3
Query: 190 GTIRTMWCSHSELADGRRGFAAENTDRAREYKPQVRRLTSGCL 62
G + +W SH++ G G+ A R Y V GC+
Sbjct: 310 GLSKVVWDSHTQTPCGTMGYTAPEIVRDERYSKGVDMWALGCV 352
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 26.2 bits (55), Expect = 1.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 305 VTSFASGIVREPLNGEVAVCPVGPE 379
V + ++ EP+ GE +CP PE
Sbjct: 220 VNDKTAAVIVEPVQGEGGICPAKPE 244
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 26.2 bits (55), Expect = 1.9
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
Frame = -1
Query: 369 TGHTATSPFSGSRTMPLANDV-TARLGAPPRTLTVGXXXXXXXXXXXXX*SFTNSSLIAF 193
T T+ F+ R +P N + T+ R T+ S+TN S
Sbjct: 126 TDSTSILSFNTIRLIPSTNVINTSHYKGFNRYPTISSTVKVGKRAATASFSYTNVSSSVI 185
Query: 192 AAPYELCGAVTVSSPTAGGGSP 127
A Y + +SSP+ +P
Sbjct: 186 ATAYTSASSTILSSPSVEQSTP 207
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.8 bits (54), Expect = 2.5
Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
Frame = -1
Query: 399 SRPTSDTSGPTGHTATSPFSGSRTMPLANDVTARLGAPPR----TLTVGXXXXXXXXXXX 232
S+P+ ++ + ++ +P S S + ++ V + +P TLT
Sbjct: 185 SQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTS 244
Query: 231 XX*SFTNSSLIAFAAPYELCGAVTVSSPTAGGGSPPKTPTVLANT 97
S T+SSL + ++ + + SS + S +PT ++T
Sbjct: 245 SSSSSTSSSLSSSSSSSTASSSSSSSSIISSSSSSSSSPTSTSST 289
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 25.0 bits (52), Expect = 4.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -2
Query: 392 PQVTPLGPPGTPRPHRSAA 336
P +TP+ P TP P +S+A
Sbjct: 1035 PNLTPVNVPPTPPPRKSSA 1053
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 25.0 bits (52), Expect = 4.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2
Query: 371 PPGTPRPHRSAARALCRSRTTSLP 300
PP P+P R AAR S S P
Sbjct: 224 PPAPPKPRRLAARTSSNSSGVSSP 247
>SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 923
Score = 25.0 bits (52), Expect = 4.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +2
Query: 152 ELTVTAPHSSYGAAKAMSELLVNDYARRGWADARAVRLPTVSVRGGAPNLAVTS 313
E V +P S YGA M N W++A A + G +P+ TS
Sbjct: 281 EYEVDSPMSQYGAIPFMQAHKPNSDVAVFWSNAAATWIDVEKESGPSPHSQSTS 334
>SPAC19E9.03 |pas1|SPAC57A10.01|cyclin Pas1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.0 bits (52), Expect = 4.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1
Query: 156 SSPTAGGGSPPKTPTVL 106
S+P + G +PP TP+VL
Sbjct: 237 STPVSVGSTPPSTPSVL 253
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 24.6 bits (51), Expect = 5.8
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 4/67 (5%)
Frame = -2
Query: 362 TPRPHRSAARALCRSRTTSLPGWARRRARSLWAGAQRERLPSLDARNHLPIVRSLPSRHH 183
T + RS A + RSR+TS RR+ + R R H P R+ SRHH
Sbjct: 112 TEKDSRSIAHSTSRSRSTSPANRHRRKEKERTRSNHRHG----SHRRHEP-YRTHLSRHH 166
Query: 182 ----TNY 174
TNY
Sbjct: 167 RHSTTNY 173
>SPAC821.07c |moc3||transcription factor Moc3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 497
Score = 24.2 bits (50), Expect = 7.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 97 KPQVRRLTSGCLEQRPRRVE 38
KP RR +GCL R RR++
Sbjct: 26 KPTKRRTKTGCLTCRRRRIK 45
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 24.2 bits (50), Expect = 7.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -1
Query: 360 TATSPFSGSRTMPLANDVTARLGAPP 283
T T+PF+G++ MP +R PP
Sbjct: 335 TTTTPFAGNQVMPTPQVQGSRPPPPP 360
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,370,766
Number of Sequences: 5004
Number of extensions: 23109
Number of successful extensions: 89
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 89
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 136158338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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