BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_P15
(402 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0371 + 7858170-7859624 39 0.002
08_02_1326 - 26158279-26159712 37 0.005
03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484 36 0.009
02_05_1032 + 33637108-33638421 36 0.016
06_01_0272 + 2016836-2017963 35 0.021
06_01_0610 - 4415080-4415461,4415872-4416851 33 0.085
07_03_1590 + 27960241-27961104 31 0.34
09_04_0165 + 15274448-15277336 31 0.45
09_02_0435 - 9384225-9384412,9385084-9385133,9385209-9385274,938... 30 0.79
06_01_0185 - 1437693-1437834,1437969-1438078,1438214-1438264,143... 29 1.0
06_03_1209 + 28434676-28435242 29 1.4
09_04_0416 - 17399059-17399777,17400560-17400704 29 1.8
02_05_0460 - 29224525-29224620,29225525-29226625 29 1.8
11_06_0239 + 21637451-21638098,21638172-21638714 28 2.4
11_06_0156 + 20748472-20748951 28 2.4
01_05_0511 - 22831889-22832523,22833743-22833835,22834018-228342... 28 2.4
12_01_0389 + 3067808-3069121 28 3.2
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 28 3.2
06_01_0731 + 5380500-5380631,5380717-5380767,5381844-5381889,538... 28 3.2
02_05_1005 - 33445738-33446274 28 3.2
01_06_0249 + 27868897-27871599 28 3.2
03_05_0736 - 27254502-27255497 27 4.2
12_02_0872 + 23884715-23885770 27 5.6
10_08_0933 + 21661209-21662813 27 5.6
01_07_0357 + 43032552-43033034,43034054-43034383,43035210-430353... 27 5.6
01_06_1415 + 37171380-37171923,37172476-37172666,37173628-37173678 27 5.6
01_02_0103 + 11153389-11153856 27 5.6
08_02_0471 - 17563245-17563488,17563564-17563655,17563941-175640... 27 7.3
06_01_0151 + 1131268-1131867 27 7.3
04_03_0173 + 12248973-12249809 27 7.3
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 27 7.3
01_05_0663 - 24119355-24120101 27 7.3
10_08_0666 - 19691985-19692216,19692327-19692404,19692508-196928... 26 9.7
05_07_0286 - 28988294-28988383,28988486-28989007,28989117-289897... 26 9.7
01_04_0051 + 15430980-15431591 26 9.7
01_01_0119 + 1102872-1104170,1105419-1105516,1105849-1106206 26 9.7
>03_02_0371 + 7858170-7859624
Length = 484
Score = 38.7 bits (86), Expect = 0.002
Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 1/103 (0%)
Frame = +2
Query: 26 LRVNFDATRALLEAARRKAPNLRFVFASTVGVFGGEPPPAVGELTVT-APHSSYGAAKAM 202
+R N ALLEAAR P V+AS+ V+G E T P S Y A K
Sbjct: 217 VRANVGGFVALLEAARMANPQPAIVWASSSSVYGLNSHVPFSEHDRTDRPASLYAATKKA 276
Query: 203 SELLVNDYARRGWADARAVRLPTVSVRGGAPNLAVTSFASGIV 331
E + + Y A+R TV G P++A F I+
Sbjct: 277 GEEIAHAYNHIYGLSLTALRFFTVYGPWGRPDMAYFFFTRDIL 319
>08_02_1326 - 26158279-26159712
Length = 477
Score = 37.1 bits (82), Expect = 0.005
Identities = 30/95 (31%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +2
Query: 65 AARRKAPNLRFVFASTVGVFG-GEPPPAVGELTVTAPHSSYGAAKAMSELLVNDYARRGW 241
AA+ P V+AS+ V+G P E P S Y A K E + + Y
Sbjct: 235 AAKHADPQPAIVWASSSSVYGLNTDAPFSEEHRTDRPASLYAATKKAGEAIAHAYNHIYG 294
Query: 242 ADARAVRLPTVSVRGGAPNLAVTSFASGIVR-EPL 343
+R TV G P++A SFA IV EP+
Sbjct: 295 LSITGLRFFTVYGPWGRPDMAYFSFARSIVAGEPI 329
>03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484
Length = 663
Score = 36.3 bits (80), Expect = 0.009
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Frame = +2
Query: 35 NFDATRALLEAARRKAPNLRFVFASTVGVFGGEPPPAV---GELTVTAPHSSYGAAKAMS 205
N T LLEA + RF+ ST V+G AV E + P + Y A KA +
Sbjct: 107 NIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDAVVGNHEASQLLPTNPYSATKAGA 166
Query: 206 ELLVNDYARRGWADARAVRLPTVSVRG 286
E+LV Y R+ LP ++ RG
Sbjct: 167 EMLVMAY-------GRSYGLPVITTRG 186
>02_05_1032 + 33637108-33638421
Length = 437
Score = 35.5 bits (78), Expect = 0.016
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +2
Query: 56 LLEAARRKAPNLRFVFASTVGVFG-GEPPPAVGELTVTAPHSSYGAAKAMSELLVNDYAR 232
LLEA + P V+AS+ V+G + P P S Y A K E + + Y
Sbjct: 205 LLEACKDADPQPAIVWASSSSVYGLNDKVPFTESDRTDQPASLYAATKKAGEEITHTYNH 264
Query: 233 RGWADARAVRLPTVSVRGGAPNLAVTSFASGIVR 334
+R TV G P++A SF I++
Sbjct: 265 IYGLSITGLRFFTVYGPWGRPDMAYFSFTRNILQ 298
>06_01_0272 + 2016836-2017963
Length = 375
Score = 35.1 bits (77), Expect = 0.021
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +2
Query: 56 LLEAARRKAPNLRFVFASTVGVFGGEPPPAVGELTVTAPHSSYGAAKAMSELLVNDY 226
LLEA R + +R+ A + +FG PPP E + P S Y AAK + +Y
Sbjct: 146 LLEAVRLASKRIRYYQAGSSEMFGSTPPPQ-SESSPFHPRSPYAAAKVAAHWYTVNY 201
>06_01_0610 - 4415080-4415461,4415872-4416851
Length = 453
Score = 33.1 bits (72), Expect = 0.085
Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +2
Query: 26 LRVNFDATRALLEAARRKAPNLRFVFASTVGVFG-GEPPPAVGELTVTAPHSSYGAAKAM 202
+R N +LLE+ + P V+AS+ V+G + P P S Y A K
Sbjct: 207 VRSNVAGLVSLLESCKDADPQPAVVWASSSSVYGLNDAVPFSEAHRTDKPASLYAATKKA 266
Query: 203 SELLVNDYARRGWADARAVRLPTVSVRGGAPNLAVTSFASGIVR 334
E + + Y +R TV G P++A F I++
Sbjct: 267 GEAITHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRNILQ 310
>07_03_1590 + 27960241-27961104
Length = 287
Score = 31.1 bits (67), Expect = 0.34
Identities = 28/89 (31%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Frame = +2
Query: 11 DFDLGLRVNFDATRA-LLEAARRKAPNLRFVFASTVGVFGGEPPPAVGELTVTAPHSSYG 187
DFD + VN A+ A + AAR AP V T G P PAV ++T +
Sbjct: 126 DFDAMMAVNARASLAGIKHAARVMAPRRAGVILCTASAVGVLPLPAVATHSITKA-TIIA 184
Query: 188 AAKAMSELLVNDYARRGWADARAVRLPTV 274
+A +E L R AVR P +
Sbjct: 185 IVRAAAEPLARHGLRVNAISPGAVRTPVL 213
>09_04_0165 + 15274448-15277336
Length = 962
Score = 30.7 bits (66), Expect = 0.45
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 209 LLVNDYARRGWADARAVRLPTVSVRGGAPNL 301
+++N Y R+GW + A L + RGG P+L
Sbjct: 861 IMINIYGRKGWIEGVANVLAELKSRGGEPDL 891
>09_02_0435 -
9384225-9384412,9385084-9385133,9385209-9385274,
9385360-9385451,9385893-9385975,9386181-9386259,
9386888-9387115,9387196-9387297,9387719-9387854,
9387984-9388033,9389391-9389618
Length = 433
Score = 29.9 bits (64), Expect = 0.79
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 92 RFVFASTVGVFGG-EPPPAVGELTVTAPHSSYGAAKAMSELLVND 223
+ VF+S+ V+G + P E +T PH+ YG K ++E + D
Sbjct: 138 KLVFSSSAAVYGSPKNSPCTEEFPLT-PHNPYGRTKLIAEEICRD 181
>06_01_0185 -
1437693-1437834,1437969-1438078,1438214-1438264,
1438877-1439122,1439244-1439315,1439614-1439648,
1439755-1439845,1440546-1440610,1440733-1440813,
1441020-1441137,1441535-1441627,1441865-1441997,
1442471-1442503,1443264-1443343,1443444-1443549,
1443621-1443795,1443884-1443980,1444819-1445251,
1445329-1445459,1446052-1446341,1446429-1447002
Length = 1051
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +2
Query: 227 ARRGWADARAVRLPTVSVRGGAPNLAVTSFASGIVREPLN 346
+RR W A A+ + V AP+ A++ F+ G V EP N
Sbjct: 322 SRRRWRHAAAISSFSAFVAENAPSCALSGFSFGGVCEPCN 361
>06_03_1209 + 28434676-28435242
Length = 188
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -2
Query: 401 TRDPQVTPLGPPGTPRPHRSAARALCRSRTTSLPGWARRRARSLWAGAQRERLP 240
T P P PP PRP +AA A S ++++ W+ R+ + R P
Sbjct: 70 TNFPLAAPSAPP--PRPPAAAAAAATSSHSSTVESWSGGAPRAAASALARSAAP 121
>09_04_0416 - 17399059-17399777,17400560-17400704
Length = 287
Score = 28.7 bits (61), Expect = 1.8
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = -2
Query: 380 PLGPPGTPRPHRSAARALCRSRTTSLP---GWARRRA-RSLW 267
PL P +P HRSA CR R++ P GW R+R R W
Sbjct: 230 PLRPAPSPPRHRSAR---CRRRSSCHPALYGWKRKRGEREKW 268
>02_05_0460 - 29224525-29224620,29225525-29226625
Length = 398
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -2
Query: 377 LGPPGTPRPHRSA-ARALCRSRTTSLPGWARRRARSLWAGAQRERL 243
L PP P H A A A+ + ++ PG +++R R+ + Q+ER+
Sbjct: 288 LRPPPLPSSHPHAHAAAVVAASASAPPGPSKKRFRTKFTAEQKERM 333
>11_06_0239 + 21637451-21638098,21638172-21638714
Length = 396
Score = 28.3 bits (60), Expect = 2.4
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +2
Query: 134 PPPAVGELTVTAPHSSYGAAKAMSELLVNDYARRGWADARAVRLPTVSVRGG-APNLAVT 310
P GE VTA + + AA + N W D A R V V GG AP L T
Sbjct: 243 PTKRKGEACVTAIYDATPAAASDERRGHNFAVTADWGDVDADRYACVVVPGGRAPELLAT 302
Query: 311 -SFASGIVRE 337
A +VRE
Sbjct: 303 RGEAVALVRE 312
>11_06_0156 + 20748472-20748951
Length = 159
Score = 28.3 bits (60), Expect = 2.4
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 362 TPRPHRSAARALCRSRTTSLPGWARRRARSLWAGA 258
T +P + L RSR + GW RR A +WA A
Sbjct: 120 TRQPSSPSRGCLRRSRGRAYAGWWRRPADPVWAAA 154
>01_05_0511 -
22831889-22832523,22833743-22833835,22834018-22834215,
22834365-22834494,22834596-22834714,22835244-22835487,
22835607-22835807
Length = 539
Score = 28.3 bits (60), Expect = 2.4
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = -2
Query: 353 PHRSAARALCRSRTTSLPGWARRRARSLWAGAQRERLPSLDARNHLPIVRSLPSRH 186
P + RA R +L W R R R L + R PSL R H + L SR+
Sbjct: 437 PEKGEGRATDGGRGPAL-SWGRSRPRLLLRQIRTARCPSLPGRFHAAELALLRSRY 491
>12_01_0389 + 3067808-3069121
Length = 437
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 362 TPRPHRSAARALCRSRTTSLPGWARRRARSLWAGAQRERLP-SLDA 228
+P R+A RAL + G R RA ++ AGA RE + LDA
Sbjct: 263 SPGAARAAVRALANACRARASGACRNRALAVDAGAAREAIELELDA 308
>07_03_1424 -
26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 27.9 bits (59), Expect = 3.2
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = -2
Query: 398 RDPQVTPLGPPGTPRPHRSAARALCRSRTTSLPGWARR 285
R VTP GTPR AA + R RT+S+ +RR
Sbjct: 70 RSAPVTPKSLAGTPRAAACAAGSGVRDRTSSIGTSSRR 107
>06_01_0731 +
5380500-5380631,5380717-5380767,5381844-5381889,
5383356-5383495
Length = 122
Score = 27.9 bits (59), Expect = 3.2
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 44 ATRALLEAARRKAPNLRFVFASTVGVFGGEPPPAVGELTVTAPHSSYGAAKAMSELLVND 223
A ++L A P L +F+ T +FG P +LTVT SY AA + S V+
Sbjct: 50 AITSVLHDATAVVPPL-LLFSGTSALFGAYALPTFAQLTVT----SYYAASSASHYAVSQ 104
Query: 224 YARR 235
R+
Sbjct: 105 ITRQ 108
>02_05_1005 - 33445738-33446274
Length = 178
Score = 27.9 bits (59), Expect = 3.2
Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +2
Query: 122 FGGE---PPPAVGELTVTAPHSSYGAAKAMSELLVNDYARRGWADARAVRLPTVSVRGGA 292
+GGE P AV A H YGA + Y + W D+ V TV+ G
Sbjct: 100 YGGEAWQPSDAVAAWAEEAQHYDYGANACAAGKECGHYKQMMWRDSTQVGCATVTCSSGE 159
Query: 293 PNLA 304
+A
Sbjct: 160 TLMA 163
>01_06_0249 + 27868897-27871599
Length = 900
Score = 27.9 bits (59), Expect = 3.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -2
Query: 224 NHLPIVRSLPSRHHTNYVVQ 165
N PIVRS+ HTN+VVQ
Sbjct: 329 NACPIVRSVSGLSHTNFVVQ 348
>03_05_0736 - 27254502-27255497
Length = 331
Score = 27.5 bits (58), Expect = 4.2
Identities = 15/30 (50%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -3
Query: 331 HYAARE-RRHCQVGRAAAHAHCGQAHSASV 245
H AA E RRH Q R A H H G A S+
Sbjct: 285 HRAAEEARRHPQRRRGARHCHLGAADPGSL 314
>12_02_0872 + 23884715-23885770
Length = 351
Score = 27.1 bits (57), Expect = 5.6
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +2
Query: 227 ARRGWADARAVRLPTV-SVRGGAPNLAVTSFASGIVREPLNGEV 355
ARRG ARA RLP SV G P + T V N V
Sbjct: 135 ARRGRGVARATRLPPCGSVAGAYPAMVATHLFGAFVMLSANAAV 178
>10_08_0933 + 21661209-21662813
Length = 534
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -2
Query: 353 PHRS--AARALCRSRTTSLPGWARRRARSLW 267
P RS R+L + + S+P WARRR+ W
Sbjct: 200 PDRSYRPTRSLFATSSLSIPAWARRRSAPGW 230
>01_07_0357 +
43032552-43033034,43034054-43034383,43035210-43035325,
43035589-43035679,43035790-43035860,43036202-43036258,
43036809-43036860,43037139-43037170,43037686-43037753,
43038148-43038353
Length = 501
Score = 27.1 bits (57), Expect = 5.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 395 DPQVTPLGPPGTPRPHRSAARALCRSRTTSLP 300
+P+ T L P PRP R + A+C + + P
Sbjct: 18 NPRPTTLAPTPNPRPRRRNSLAICSASASGDP 49
>01_06_1415 + 37171380-37171923,37172476-37172666,37173628-37173678
Length = 261
Score = 27.1 bits (57), Expect = 5.6
Identities = 13/45 (28%), Positives = 19/45 (42%)
Frame = -3
Query: 376 WAHRAHRDLTVQRLAHYAARERRHCQVGRAAAHAHCGQAHSASVC 242
W RA + ++ +A R+R A + HC H SVC
Sbjct: 148 WDTRAPQPSQIESAVRWALRKRSQ----NKAVYVHCAYGHGRSVC 188
>01_02_0103 + 11153389-11153856
Length = 155
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Frame = -3
Query: 340 RLAHYAARERRHCQV---GRAAAHAHCGQAHSASVCPA 236
++ +A +RR C V G AA CG HS+S P+
Sbjct: 7 QIKSFATAKRRSCLVLAAGAAAPAGWCGSPHSSSSSPS 44
>08_02_0471 -
17563245-17563488,17563564-17563655,17563941-17564023,
17564418-17564499,17565234-17565461,17565553-17565654,
17565818-17565953,17566080-17566129,17566465-17566572,
17568702-17568911
Length = 444
Score = 26.6 bits (56), Expect = 7.3
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 35 NFDATRALLEAARRKAPNLRFVFASTVGVFGG-EPPPAVGELTVTAPHSSYGAAKAMSEL 211
N + T LLE + VF+S+ V+G + P E +T P++ YG K + E
Sbjct: 150 NVNGTVNLLEVMSAHGCK-KLVFSSSAAVYGSPKNSPCTEEFPLT-PNNPYGKTKLVVED 207
Query: 212 LVNDYAR 232
+ D R
Sbjct: 208 ICRDIYR 214
>06_01_0151 + 1131268-1131867
Length = 199
Score = 26.6 bits (56), Expect = 7.3
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = -1
Query: 201 IAFAAPYEL---CGAVTVSSPTAGGGSPPKTPTV 109
+A++ PY++ C V VSS GG + PK+ V
Sbjct: 162 LAYSRPYDVAVECAPVDVSSGAGGGKTRPKSTMV 195
>04_03_0173 + 12248973-12249809
Length = 278
Score = 26.6 bits (56), Expect = 7.3
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 213 NSSLIAFAAPYELCGAVTVSSPTAGGGSPPKTP 115
N S++ +AP A ++ P++GGG+PP +P
Sbjct: 166 NLSVMQVSAPIV---APSLGGPSSGGGTPPSSP 195
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 26.6 bits (56), Expect = 7.3
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = -2
Query: 401 TRDPQVTPLGPPGTPRPHRSAARALCRSRTTSLPGWARRRARSLWAGAQRERLPSLDARN 222
+R P V G P RS +R+ R ++ S+ R RS RE+ S+ R
Sbjct: 436 SRSPDVQGHGRSPVRAPERSESRSPPREKSISMSPQRRSARRSKSRSPLREKSVSMSPRR 495
Query: 221 HLPIVRSLP 195
+ +SLP
Sbjct: 496 SMS--KSLP 502
>01_05_0663 - 24119355-24120101
Length = 248
Score = 26.6 bits (56), Expect = 7.3
Identities = 15/52 (28%), Positives = 19/52 (36%)
Frame = -2
Query: 380 PLGPPGTPRPHRSAARALCRSRTTSLPGWARRRARSLWAGAQRERLPSLDAR 225
P P P P +AA A+ + W R LWA A + AR
Sbjct: 99 PPAPQAAPAPEVAAAAAVDGAARGDRGYWVETMMRELWAAASMDDARERGAR 150
>10_08_0666 -
19691985-19692216,19692327-19692404,19692508-19692837,
19692913-19693158,19693224-19693483,19694469-19695023
Length = 566
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -2
Query: 395 DPQVTPLGPPGTPRPHRSAARALCRSRTTSLPGWARRRAR 276
+P +TP+ P SAA AL R T W RR AR
Sbjct: 359 EPCITPIQEGAAPPREASAAEALRRDSET----WTRRVAR 394
>05_07_0286 -
28988294-28988383,28988486-28989007,28989117-28989758,
28990554-28990597,28990836-28991016
Length = 492
Score = 26.2 bits (55), Expect = 9.7
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
Frame = -2
Query: 377 LGPPGTPRPHRSAARALCRSRTTSLPGWARRRARS---LWAGAQRERLPSLDARNHL 216
L PP PRP R R +S+ W RR L + + ++ R+HL
Sbjct: 26 LKPPPPPRPSGRVLSRRARRRRSSVLAWRHRRCFGGLILQTWKKNHTISAVQQRSHL 82
>01_04_0051 + 15430980-15431591
Length = 203
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = -2
Query: 383 TPLGPPGTPRPHRSAARALCRSRTTSLPGWARRRARSLWA--GAQRERLPSLDARNHL 216
+P PP P PH +AA R ++ P W RR A GA+R R R L
Sbjct: 125 SPRTPPWLP-PHWAAAAQRPWPRGSTTPSWRCRRRMEAGARGGARRLRRRRRQGRGRL 181
>01_01_0119 + 1102872-1104170,1105419-1105516,1105849-1106206
Length = 584
Score = 26.2 bits (55), Expect = 9.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 372 PTGHTATSPFSGSRTMPLANDVTARLGAPPR 280
P+ A SPFSGS L R +PPR
Sbjct: 539 PSFAAAESPFSGSAAAALPTSKLRRHSSPPR 569
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,751,951
Number of Sequences: 37544
Number of extensions: 217406
Number of successful extensions: 1309
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1253
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 694697784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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