BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_P13
(640 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10860-1|AAA60331.1| 693|Homo sapiens guanosine 5'-monophosphat... 132 8e-31
BC012178-1|AAH12178.1| 693|Homo sapiens guanine monphosphate sy... 132 8e-31
AK223399-1|BAD97119.1| 693|Homo sapiens guanine monophosphate s... 132 8e-31
AF297747-1|AAG53900.1| 551|Homo sapiens MLL/GMPS fusion protein... 94 4e-19
M77810-1|AAA35869.1| 474|Homo sapiens transcription factor GATA... 31 2.6
AK123974-1|BAC85739.1| 322|Homo sapiens protein ( Homo sapiens ... 30 8.0
>U10860-1|AAA60331.1| 693|Homo sapiens guanosine 5'-monophosphate
synthetase protein.
Length = 693
Score = 132 bits (320), Expect = 8e-31
Identities = 79/187 (42%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Frame = +2
Query: 89 VCAALLK--LLSARIKLSHYTLIWVHA*DESLSKRCLRELGVDSTS*RFT-SFAVGSTAI 259
VC ALL L ++ H ++ + + L++LG+ SF G+T +
Sbjct: 251 VCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAHSFYNGTTTL 310
Query: 260 RENGPAGVAGGRVRHTPLLCHAISPEDKRKIIGDVFIRIAEQAVHDLNLQEDQVLLGQGT 439
+ R+ T L SPE+KRKIIGD F++IA + + ++NL+ ++V L QGT
Sbjct: 311 PISDEDRTPRKRISKT--LNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGT 368
Query: 440 LRPDLIESASALCSTNAATIKTHHNDTEXXXXXXXXXXXXEPLKDFHKDEVRALGAELGL 619
LRPDLIESAS + S A IKTHHNDTE EPLKDFHKDEVR LG ELGL
Sbjct: 369 LRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVRILGRELGL 428
Query: 620 PPAMVER 640
P +V R
Sbjct: 429 PEELVSR 435
>BC012178-1|AAH12178.1| 693|Homo sapiens guanine monphosphate
synthetase protein.
Length = 693
Score = 132 bits (320), Expect = 8e-31
Identities = 79/187 (42%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Frame = +2
Query: 89 VCAALLK--LLSARIKLSHYTLIWVHA*DESLSKRCLRELGVDSTS*RFT-SFAVGSTAI 259
VC ALL L ++ H ++ + + L++LG+ SF G+T +
Sbjct: 251 VCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAHSFYNGTTTL 310
Query: 260 RENGPAGVAGGRVRHTPLLCHAISPEDKRKIIGDVFIRIAEQAVHDLNLQEDQVLLGQGT 439
+ R+ T L SPE+KRKIIGD F++IA + + ++NL+ ++V L QGT
Sbjct: 311 PISDEDRTPRKRISKT--LNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGT 368
Query: 440 LRPDLIESASALCSTNAATIKTHHNDTEXXXXXXXXXXXXEPLKDFHKDEVRALGAELGL 619
LRPDLIESAS + S A IKTHHNDTE EPLKDFHKDEVR LG ELGL
Sbjct: 369 LRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVRILGRELGL 428
Query: 620 PPAMVER 640
P +V R
Sbjct: 429 PEELVSR 435
>AK223399-1|BAD97119.1| 693|Homo sapiens guanine monophosphate
synthetase variant protein.
Length = 693
Score = 132 bits (320), Expect = 8e-31
Identities = 79/187 (42%), Positives = 104/187 (55%), Gaps = 3/187 (1%)
Frame = +2
Query: 89 VCAALLK--LLSARIKLSHYTLIWVHA*DESLSKRCLRELGVDSTS*RFT-SFAVGSTAI 259
VC ALL L ++ H ++ + + L++LG+ SF G+T +
Sbjct: 251 VCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAHSFYNGTTTL 310
Query: 260 RENGPAGVAGGRVRHTPLLCHAISPEDKRKIIGDVFIRIAEQAVHDLNLQEDQVLLGQGT 439
+ R+ T L SPE+KRKIIGD F++IA + + ++NL+ ++V L QGT
Sbjct: 311 PISDEDRTPRKRISKT--LNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGT 368
Query: 440 LRPDLIESASALCSTNAATIKTHHNDTEXXXXXXXXXXXXEPLKDFHKDEVRALGAELGL 619
LRPDLIESAS + S A IKTHHNDTE EPLKDFHKDEVR LG ELGL
Sbjct: 369 LRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVRILGRELGL 428
Query: 620 PPAMVER 640
P +V R
Sbjct: 429 PEELVSR 435
>AF297747-1|AAG53900.1| 551|Homo sapiens MLL/GMPS fusion protein
protein.
Length = 551
Score = 93.9 bits (223), Expect = 4e-19
Identities = 58/148 (39%), Positives = 82/148 (55%), Gaps = 3/148 (2%)
Frame = +2
Query: 89 VCAALLK--LLSARIKLSHYTLIWVHA*DESLSKRCLRELGVDSTS*RFT-SFAVGSTAI 259
VC ALL L ++ H ++ + + L++LG+ SF G+T +
Sbjct: 384 VCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAHSFYNGTTTL 443
Query: 260 RENGPAGVAGGRVRHTPLLCHAISPEDKRKIIGDVFIRIAEQAVHDLNLQEDQVLLGQGT 439
+ R+ T L SPE+KRKIIGD F++IA + + ++NL+ ++V L QGT
Sbjct: 444 PISDEDRTPRKRISKT--LNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGT 501
Query: 440 LRPDLIESASALCSTNAATIKTHHNDTE 523
LRPDLIESAS + S A IKTHHNDTE
Sbjct: 502 LRPDLIESASLVASGKAELIKTHHNDTE 529
>M77810-1|AAA35869.1| 474|Homo sapiens transcription factor GATA-2
protein.
Length = 474
Score = 31.5 bits (68), Expect = 2.6
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Frame = +3
Query: 78 VDSTYAPHYSNCSPRGSSYRTTH*Y---GFMRKTKV*VRGVYVNWASTPRR--NASHHSR 242
+DS P+Y+N + RG SY H G M + + + + W + +A+HH
Sbjct: 52 LDSQGNPYYANPAQRGVSYSPAHARLTGGQMCRPHL-LHSPGLPWLDGGKAALSAAHHKT 110
Query: 243 LAALPYARTVLRGSRAGG 296
P+++T L S AGG
Sbjct: 111 WTVSPFSKTPLHPSAAGG 128
>AK123974-1|BAC85739.1| 322|Homo sapiens protein ( Homo sapiens
cDNA FLJ41980 fis, clone SMINT2007391. ).
Length = 322
Score = 29.9 bits (64), Expect = 8.0
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 253 CHTRERSCGGRGRAGTSHASTLPRD 327
C T ++S GG+G AG +HA + R+
Sbjct: 164 CRTSQQSLGGKGGAGRTHAPSAARE 188
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,177,500
Number of Sequences: 237096
Number of extensions: 2131012
Number of successful extensions: 4613
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4597
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -