Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_P13
(640 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46935-5|CAL36508.1| 709|Caenorhabditis elegans Hypothetical pr... 127 8e-30
Z46935-3|CAE48508.1| 794|Caenorhabditis elegans Hypothetical pr... 127 8e-30
Z46935-2|CAA87052.1| 792|Caenorhabditis elegans Hypothetical pr... 127 8e-30
Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL032632-8|CAA21592.2| 420|Caenorhabditis elegans Hypothetical ... 29 2.8
Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical pr... 28 4.9
U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of c... 28 6.5
U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of c... 28 6.5
AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding p... 28 6.5
AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich ... 28 6.5
>Z46935-5|CAL36508.1| 709|Caenorhabditis elegans Hypothetical
protein M106.4c protein.
Length = 709
Score = 127 bits (306), Expect = 8e-30
Identities = 62/103 (60%), Positives = 73/103 (70%)
Frame = +2
Query: 332 PEDKRKIIGDVFIRIAEQAVHDLNLQEDQVLLGQGTLRPDLIESASALCSTNAATIKTHH 511
PE KRKIIG+ FIR+ + + DLN+ D+ L QGTLRPDLIESASAL S +A TIKTHH
Sbjct: 323 PEMKRKIIGNTFIRVKDVIMKDLNINHDEYFLAQGTLRPDLIESASALASGHADTIKTHH 382
Query: 512 NDTEXXXXXXXXXXXXEPLKDFHKDEVRALGAELGLPPAMVER 640
NDT EPLKDFHKDEVR LG +LGLP ++V+R
Sbjct: 383 NDTFLVRELRKLGKVVEPLKDFHKDEVRELGKDLGLPESIVQR 425
>Z46935-3|CAE48508.1| 794|Caenorhabditis elegans Hypothetical
protein M106.4b protein.
Length = 794
Score = 127 bits (306), Expect = 8e-30
Identities = 62/103 (60%), Positives = 73/103 (70%)
Frame = +2
Query: 332 PEDKRKIIGDVFIRIAEQAVHDLNLQEDQVLLGQGTLRPDLIESASALCSTNAATIKTHH 511
PE KRKIIG+ FIR+ + + DLN+ D+ L QGTLRPDLIESASAL S +A TIKTHH
Sbjct: 408 PEMKRKIIGNTFIRVKDVIMKDLNINHDEYFLAQGTLRPDLIESASALASGHADTIKTHH 467
Query: 512 NDTEXXXXXXXXXXXXEPLKDFHKDEVRALGAELGLPPAMVER 640
NDT EPLKDFHKDEVR LG +LGLP ++V+R
Sbjct: 468 NDTFLVRELRKLGKVVEPLKDFHKDEVRELGKDLGLPESIVQR 510
>Z46935-2|CAA87052.1| 792|Caenorhabditis elegans Hypothetical
protein M106.4a protein.
Length = 792
Score = 127 bits (306), Expect = 8e-30
Identities = 62/103 (60%), Positives = 73/103 (70%)
Frame = +2
Query: 332 PEDKRKIIGDVFIRIAEQAVHDLNLQEDQVLLGQGTLRPDLIESASALCSTNAATIKTHH 511
PE KRKIIG+ FIR+ + + DLN+ D+ L QGTLRPDLIESASAL S +A TIKTHH
Sbjct: 406 PEMKRKIIGNTFIRVKDVIMKDLNINHDEYFLAQGTLRPDLIESASALASGHADTIKTHH 465
Query: 512 NDTEXXXXXXXXXXXXEPLKDFHKDEVRALGAELGLPPAMVER 640
NDT EPLKDFHKDEVR LG +LGLP ++V+R
Sbjct: 466 NDTFLVRELRKLGKVVEPLKDFHKDEVRELGKDLGLPESIVQR 508
>Z78065-3|CAB01517.2| 406|Caenorhabditis elegans Hypothetical
protein T09E8.4 protein.
Length = 406
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
Frame = -2
Query: 63 CSP-GSIV*TPPPRWSSIVPLV 1
C P GSIV PPPRW I+ LV
Sbjct: 259 CQPWGSIVDLPPPRWIQILELV 280
>AL032632-8|CAA21592.2| 420|Caenorhabditis elegans Hypothetical
protein Y11D7A.13 protein.
Length = 420
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 359 DVFIRIAEQAVHDLNLQEDQVLLGQGTLRPDLI 457
D+F +I+E +HD+ + + LL LR DLI
Sbjct: 281 DLFNKISEMEIHDMEMTLTKFLLENRELRTDLI 313
>Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical
protein ZK669.2 protein.
Length = 264
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -3
Query: 341 CLQAKSR--GRVEACDVPARPRPPQDRSRVWQCCQPRM 234
C+Q K++ V+ C V RPRP D + + +C Q ++
Sbjct: 164 CMQGKNKFSSAVDDCIVNFRPRPDLDENFMARCAQSQL 201
>U61957-5|AAB03417.3| 559|Caenorhabditis elegans Suppressor of clr
protein 2, isoforma protein.
Length = 559
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +1
Query: 76 GLTRRMRRITQTALREDQVIALHIDMGS 159
G+ + R+T+ L+E+++++L +DMGS
Sbjct: 346 GIFSKATRLTKLNLKENELVSLPLDMGS 373
>U61957-4|AAM81129.1| 558|Caenorhabditis elegans Suppressor of clr
protein 2, isoformb protein.
Length = 558
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +1
Query: 76 GLTRRMRRITQTALREDQVIALHIDMGS 159
G+ + R+T+ L+E+++++L +DMGS
Sbjct: 345 GIFSKATRLTKLNLKENELVSLPLDMGS 372
>AF068919-1|AAC39129.1| 559|Caenorhabditis elegans Ras-binding
protein SUR-8 protein.
Length = 559
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +1
Query: 76 GLTRRMRRITQTALREDQVIALHIDMGS 159
G+ + R+T+ L+E+++++L +DMGS
Sbjct: 346 GIFSKATRLTKLNLKENELVSLPLDMGS 373
>AF054827-1|AAC25697.1| 559|Caenorhabditis elegans leucine-rich
repeat protein SOC-2 protein.
Length = 559
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +1
Query: 76 GLTRRMRRITQTALREDQVIALHIDMGS 159
G+ + R+T+ L+E+++++L +DMGS
Sbjct: 346 GIFSKATRLTKLNLKENELVSLPLDMGS 373
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,580,207
Number of Sequences: 27780
Number of extensions: 291661
Number of successful extensions: 678
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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