Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_P11
(425 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical pr... 57 5e-09
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 48 2e-06
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 48 2e-06
U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical pr... 44 3e-05
U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical pr... 31 0.26
AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical ... 31 0.35
Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical pr... 30 0.80
Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical p... 30 0.80
U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical pr... 30 0.80
AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effe... 30 0.80
Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical pr... 29 1.4
U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical pr... 28 3.2
AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical... 27 4.3
Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical pr... 27 5.6
Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical pr... 27 5.6
U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical pr... 27 5.6
U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical pr... 27 5.6
AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical ... 26 9.8
>Z78543-1|CAB01753.2| 1170|Caenorhabditis elegans Hypothetical protein
F29G6.1 protein.
Length = 1170
Score = 57.2 bits (132), Expect = 5e-09
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Frame = +2
Query: 119 CGKIYSPVCGSDGKTYENPCEF---YCEKDKTHSN-MTIVKNTACEVGIPCY--CTLEYA 280
C +SPVC S G T++N C F C ++T + +TI K C C C EY+
Sbjct: 818 CPSDFSPVCDSKGSTHQNICHFGVKRCIAERTFGDVLTIDKFEVCNEVKECNNACPKEYS 877
Query: 281 PVCGSNGKTYANKCSLE 331
PVC SNG+ N+C L+
Sbjct: 878 PVCASNGQNIVNECELD 894
Score = 52.8 bits (121), Expect = 1e-07
Identities = 24/74 (32%), Positives = 33/74 (44%)
Frame = +2
Query: 101 PPPLCICGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYA 280
PPP C C + PVCG+D TY N C C + + T C+ C
Sbjct: 15 PPPDCDCPSVIRPVCGTDNVTYNNLCFLRCVQRTNEDLLFFYNGTCCD---KKECEKVGT 71
Query: 281 PVCGSNGKTYANKC 322
P+C + G+T+ N C
Sbjct: 72 PICDNFGETHINDC 85
Score = 45.6 bits (103), Expect = 1e-05
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +2
Query: 119 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSN 298
C Y P+CG++G T+ N C +K+ S + ++ + C +++PVC S
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSL--QKEICESANSTIEVAYTGMCCDTNCPSDFSPVCDSK 829
Query: 299 GKTYANKC 322
G T+ N C
Sbjct: 830 GSTHQNIC 837
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +2
Query: 119 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGIPCYCTLE------YA 280
C K YSPVC S+G+ N CE + +N+T + C C +E ++
Sbjct: 872 CPKEYSPVCASNGQNIVNECELDKIRCLVENNVTTGDKLVKDYDGEC-CRIENCDISVFS 930
Query: 281 PVCGSNGKTYANKCSLE 331
PVC + G T+AN C ++
Sbjct: 931 PVCDTEGVTHANMCLMD 947
Score = 45.2 bits (102), Expect = 2e-05
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Frame = +2
Query: 110 LCICGKIYSPVCGSDGKTYENPCEFY---CEKDKTHSNMTIVKNTACEVGIPCYCTLEYA 280
L C K PVC S G+T+++ C F+ C DK H+ T + P CT E +
Sbjct: 1070 LASCPKTGQPVCDSRGRTHDSLCHFHNSKCIFDKIHTQNTTLTLDYQGKCCPAGCTDELS 1129
Query: 281 PVCGSNGKTYANKC 322
+C + Y N C
Sbjct: 1130 VICDQHENIYRNSC 1143
Score = 40.3 bits (90), Expect = 6e-04
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Frame = +2
Query: 119 CGKIYSPVCGSDGKTYENPC---EFYCEKDKTHS-NMTIVKNTACEVGIPC--YCT-LEY 277
C K+ +P+C + G+T+ N C +F C K+ ++T + C C CT E+
Sbjct: 66 CEKVGTPICDNFGETHINDCHFAQFQCIMKKSMGLSLTKLHMGRCS-SKDCNHNCTNTEF 124
Query: 278 APVCGSNGKTYANKC 322
PVC +NG Y N C
Sbjct: 125 DPVCDTNGSVYRNLC 139
Score = 36.7 bits (81), Expect = 0.007
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Frame = +2
Query: 137 PVCGSDGKTYENPCEFYCEK----DKTHS-NMTIVKNTACEVGIPCYCTLEYAPVCGSNG 301
PVC S G + N CEF + K H ++ +N + CT + P+C S+
Sbjct: 543 PVCDSAGNLHGNLCEFTYSRCIAASKGHQIHIATEENCISKEACQMPCTDDKHPICASDF 602
Query: 302 KTYANKCSLECTQKIIPS 355
TY N C QK + S
Sbjct: 603 STYENLCQFR-KQKCLDS 619
Score = 35.1 bits (77), Expect = 0.021
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +2
Query: 119 CGKIYSPVCGSDGKTYENPCE---FYCEKDKTH-SNMTIVKNTACEVG----IPCYCTLE 274
C K + PVC + +T++N C+ F C+ +K S + I + AC I C +
Sbjct: 257 CDKSWDPVCDTRNRTHKNVCQFKFFACKINKIDGSVIDIAHSGACRARKSTCITCPKDEK 316
Query: 275 YAPVCGSNGKTYANKCS 325
P+C + T+ CS
Sbjct: 317 KIPICDNRNMTHPTLCS 333
Score = 34.7 bits (76), Expect = 0.028
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 263 CTLEYAPVCGSNGKTYANKCSLE 331
C Y P+CG+NG T+ N CSL+
Sbjct: 772 CDNSYDPLCGTNGVTFTNACSLQ 794
Score = 34.3 bits (75), Expect = 0.037
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 257 CYCTLEYAPVCGSNGKTYANKCSLECTQK 343
C C PVCG++ TY N C L C Q+
Sbjct: 19 CDCPSVIRPVCGTDNVTYNNLCFLRCVQR 47
Score = 32.7 bits (71), Expect = 0.11
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 137 PVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACE-VGIPCYCTLEYAP 283
P+C SD TYEN C+F +K + K E + PC E +P
Sbjct: 596 PICASDFSTYENLCQFRKQKCLDSELEVLFKGKCSECLDSPCALPAENSP 645
Score = 30.7 bits (66), Expect = 0.46
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +2
Query: 140 VCGSDGKTYENPCEFYCEK--DKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSNGKTYA 313
VC S+G+T+ N C + + +T S T+ E C PVC S G+T+
Sbjct: 1030 VCDSEGQTHMNHCVYQQRRCMAQTISQKTLNIVHTGECCALASCPKTGQPVCDSRGRTHD 1089
Query: 314 NKC 322
+ C
Sbjct: 1090 SLC 1092
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 48.4 bits (110), Expect = 2e-06
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 23/94 (24%)
Frame = +2
Query: 119 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGI--------------- 253
C + PVC ++G+T++N CE + +T S + + C +G+
Sbjct: 397 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSCKKPQVCVV 456
Query: 254 -----PCY---CTLEYAPVCGSNGKTYANKCSLE 331
C CT E+ VCGS+GKTY+N+C L+
Sbjct: 457 VDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQ 490
Score = 44.8 bits (101), Expect = 3e-05
Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +2
Query: 107 PLCICGKI---YSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVG--IPCYCTL 271
P C+C + VCGSDGKTY N C N+ + N+ACE C
Sbjct: 461 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDF 520
Query: 272 EYAPVCGSNGKTYANKCSLECTQKIIPSLKME 367
A V G N K KC +C PS +ME
Sbjct: 521 YSACVVGENEKAEC-KCPDDC-----PSYEME 546
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Frame = +2
Query: 134 SPVCGSDGKTYENPCEFYCEKDKTHSNMTI--------------VKNTACEVGI----PC 259
SPVC S G Y++ C ++ +N+T+ C++G+ C
Sbjct: 258 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC 317
Query: 260 ----YCTLEYAPVCGSNGKTYANKCSLE 331
CT+ A VCG++GKTY N+C L+
Sbjct: 318 KCSEQCTMNSAHVCGTDGKTYLNECFLK 345
Score = 35.5 bits (78), Expect = 0.016
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 140 VCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTAC-EVGIPC 259
VCG+DGKTY N C K ++ + K C E G PC
Sbjct: 330 VCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPC 370
Score = 31.5 bits (68), Expect = 0.26
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 24/101 (23%)
Frame = +2
Query: 140 VCGSDGKTYENPCEFYCEKDKTHSNMTIVK----------NTACEVGIPC---YCTLEY- 277
VCG+DG TY + C + +K H + ++ + C G C C Y
Sbjct: 551 VCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYN 608
Query: 278 --------APVCGSNGKTYANKCSLECT--QKIIPSLKMEP 370
A +CG NG Y + C L+ QK P +M P
Sbjct: 609 CPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMPP 649
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Frame = +2
Query: 185 YCEKDKTH-SNMTIVKNTACEVGIPCY---CTLEYA------PVCGSNGKTYANKCSL 328
+C KT + + + AC G C+ CT P+CGS+G Y N+C L
Sbjct: 651 HCHSSKTSFPDFKVRRPCACYFGATCHNWACTCPTCNLSSNYPICGSDGIVYNNQCHL 708
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +2
Query: 107 PLCICGKIYSPVCGSDGKTYENPC 178
P C Y P+CGSDG Y N C
Sbjct: 684 PTCNLSSNY-PICGSDGIVYNNQC 706
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 140 VCGSDGKTYENPCE 181
VCGSDG TY N CE
Sbjct: 880 VCGSDGTTYSNLCE 893
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 284 VCGSNGKTYANKCSLE 331
VCGS+G TY+N C L+
Sbjct: 880 VCGSDGTTYSNLCELK 895
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = +2
Query: 170 NPCE-FYCEKDK----THSNMTIVKNTACEVGIPCYC-TLEYAPVCGSNGKTYANKCSL 328
NPCE C + N ++ C P Y ++E +PVC S+G Y + C L
Sbjct: 216 NPCEDLRCGPGEDCVVNQINGILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHL 274
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 48.4 bits (110), Expect = 2e-06
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 23/94 (24%)
Frame = +2
Query: 119 CGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGI--------------- 253
C + PVC ++G+T++N CE + +T S + + C +G+
Sbjct: 405 CEDVMRPVCATNGETFDNECEMKKKSCETKSMIKVKHQGTCGIGVCATFDSCKKPQVCVV 464
Query: 254 -----PCY---CTLEYAPVCGSNGKTYANKCSLE 331
C CT E+ VCGS+GKTY+N+C L+
Sbjct: 465 VDGKPKCVCPSCTDEFKEVCGSDGKTYSNECRLQ 498
Score = 44.8 bits (101), Expect = 3e-05
Identities = 32/92 (34%), Positives = 39/92 (42%), Gaps = 5/92 (5%)
Frame = +2
Query: 107 PLCICGKI---YSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVG--IPCYCTL 271
P C+C + VCGSDGKTY N C N+ + N+ACE C
Sbjct: 469 PKCVCPSCTDEFKEVCGSDGKTYSNECRLQNAACMAQKNIFVKYNSACEACKLKKEKCDF 528
Query: 272 EYAPVCGSNGKTYANKCSLECTQKIIPSLKME 367
A V G N K KC +C PS +ME
Sbjct: 529 YSACVVGENEKAEC-KCPDDC-----PSYEME 554
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 22/88 (25%)
Frame = +2
Query: 134 SPVCGSDGKTYENPCEFYCEKDKTHSNMTI--------------VKNTACEVGI----PC 259
SPVC S G Y++ C ++ +N+T+ C++G+ C
Sbjct: 266 SPVCSSHGVDYQSSCHLRHHACESKTNITVKFFGRCDPCHGHKCPNGQTCQLGVDRRPEC 325
Query: 260 ----YCTLEYAPVCGSNGKTYANKCSLE 331
CT+ A VCG++GKTY N+C L+
Sbjct: 326 KCSEQCTMNSAHVCGTDGKTYLNECFLK 353
Score = 35.5 bits (78), Expect = 0.016
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 140 VCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTAC-EVGIPC 259
VCG+DGKTY N C K ++ + K C E G PC
Sbjct: 338 VCGTDGKTYLNECFLKLAACKEQKDILVWKRGNCDEAGSPC 378
Score = 31.5 bits (68), Expect = 0.26
Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 24/101 (23%)
Frame = +2
Query: 140 VCGSDGKTYENPCEFYCEKDKTHSNMTIVK----------NTACEVGIPC---YCTLEY- 277
VCG+DG TY + C + +K H + ++ + C G C C Y
Sbjct: 559 VCGTDGVTYSSEC--HMKKSACHQSKFVMTAFEGKCDECLHVQCRYGEECRSGVCVCSYN 616
Query: 278 --------APVCGSNGKTYANKCSLECT--QKIIPSLKMEP 370
A +CG NG Y + C L+ QK P +M P
Sbjct: 617 CPANPPLSARICGENGVLYPSLCHLQLASCQKGAPISEMPP 657
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2
Query: 140 VCGSDGKTYENPCE 181
VCGSDG TY N CE
Sbjct: 819 VCGSDGTTYSNLCE 832
Score = 28.3 bits (60), Expect = 2.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 284 VCGSNGKTYANKCSLE 331
VCGS+G TY+N C L+
Sbjct: 819 VCGSDGTTYSNLCELK 834
Score = 27.9 bits (59), Expect = 3.2
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = +2
Query: 170 NPCE-FYCEKDK----THSNMTIVKNTACEVGIPCYC-TLEYAPVCGSNGKTYANKCSL 328
NPCE C + N ++ C P Y ++E +PVC S+G Y + C L
Sbjct: 224 NPCEDLRCGPGEDCVVNQINGILLAKCVCPTQCPNYGDSVESSPVCSSHGVDYQSSCHL 282
>U40954-1|ABA00179.1| 251|Caenorhabditis elegans Hypothetical
protein ZK813.6 protein.
Length = 251
Score = 44.4 bits (100), Expect = 3e-05
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +2
Query: 101 PPPLCICGKIYSPVCGSDGK---TYENPCEFYCEKDKTHSNMTIVKNTACEVGIPCYCTL 271
P C C PVC +G TY N C F C ++ + + + + C YC +
Sbjct: 21 PNSTCSCKPEIDPVCVREGPYQYTYSNKCVFQCAQENKKDLVLLYEGSCCSAR---YCNM 77
Query: 272 EYAPVCGSNGKTYANKCSLECTQKI 346
PVC S G+ Y C E Q I
Sbjct: 78 FEQPVC-SEGQMYQTVCEFEERQCI 101
Score = 44.4 bits (100), Expect = 3e-05
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 119 CGKIYSPVCGSDGKTYENPCEF---YCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVC 289
C PVC S+G+ Y+ CEF C + K N + ++ + C E+ PVC
Sbjct: 75 CNMFEQPVC-SEGQMYQTVCEFEERQCIEFKLFKNHISMDSSQEKCSCTAPCPTEWNPVC 133
Query: 290 GSNGKTYANKCS 325
G+T+AN C+
Sbjct: 134 DKKGQTHANFCT 145
Score = 32.7 bits (71), Expect = 0.11
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Frame = +2
Query: 119 CGKIYSPVCGSDGKTYENPCEFY---C-EKDKTHSNMTIVKNTACEVGIPCYCTLEYAPV 286
C ++PVC G+T+ N C F C K++ + ++ + + C + C V
Sbjct: 125 CPTEWNPVCDKKGQTHANFCTFLNSKCYHKNQLNESLEVDYSGVCCEDM-CSAGQTSLTV 183
Query: 287 CGSNGKTYANKCS 325
C S G T+ + CS
Sbjct: 184 CDSEGNTHTDICS 196
Score = 29.5 bits (63), Expect = 1.1
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 110 LCICGKIYSPVCGSDGKTYENPCEFYCEK 196
+C G+ VC S+G T+ + C FY K
Sbjct: 173 MCSAGQTSLTVCDSEGNTHTDICSFYIAK 201
>U39993-3|AAK72060.1| 728|Caenorhabditis elegans Hypothetical
protein F47E1.4 protein.
Length = 728
Score = 31.5 bits (68), Expect = 0.26
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 113 CICGKIYS-PVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACE 244
C C + PVC +DG Y +PC C + + ++ +CE
Sbjct: 528 CSCENAHLYPVCSADGTAYFSPCHAGCREATQFGSDPVIGFASCE 572
>AL032660-2|CAA21751.1| 690|Caenorhabditis elegans Hypothetical
protein Y70G10A.3 protein.
Length = 690
Score = 31.1 bits (67), Expect = 0.35
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +2
Query: 257 CYCTLEYAPVCGSN-GKTYANKCSLECT 337
C+C +E+ PVC N G Y + C CT
Sbjct: 457 CHCKMEWNPVCDRNTGHMYYSACHAGCT 484
>Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 29.9 bits (64), Expect = 0.80
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 233 TACEVGIPCYCTLEYAPVCGSNGK-TYANKCSLECTQK 343
TAC PC T E C NG +Y KC + C+Q+
Sbjct: 529 TACRHAGPCNATAENC-ACRENGVCSYMCKCDINCSQR 565
>Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 29.9 bits (64), Expect = 0.80
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 233 TACEVGIPCYCTLEYAPVCGSNGK-TYANKCSLECTQK 343
TAC PC T E C NG +Y KC + C+Q+
Sbjct: 529 TACRHAGPCNATAENC-ACRENGVCSYMCKCDINCSQR 565
>U40415-5|AAK39251.1| 655|Caenorhabditis elegans Hypothetical
protein K02G10.5 protein.
Length = 655
Score = 29.9 bits (64), Expect = 0.80
Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = +2
Query: 113 CICGKIYSPVCGSDGK-TYENPCEFYC 190
C C ++PVC D K T+ +PC C
Sbjct: 449 CHCDSFFNPVCSEDSKLTFLSPCHAGC 475
>AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effect
sterile 2 protein.
Length = 773
Score = 29.9 bits (64), Expect = 0.80
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +2
Query: 233 TACEVGIPCYCTLEYAPVCGSNGK-TYANKCSLECTQK 343
TAC PC T E C NG +Y KC + C+Q+
Sbjct: 529 TACRHAGPCNATAENC-ACRENGVCSYMCKCDINCSQR 565
>Z82288-1|CAB05322.2| 479|Caenorhabditis elegans Hypothetical
protein ZK896.1 protein.
Length = 479
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 285 TGAYSKVQ*QGMPTSHAVFFTIVILLCVLSF 193
TGA+ + Q TS+ + FTIV+ +C+ F
Sbjct: 448 TGAFVSFEFQKSATSNGILFTIVLTICMAIF 478
>U39993-2|AAK72059.1| 744|Caenorhabditis elegans Hypothetical
protein F47E1.2 protein.
Length = 744
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +2
Query: 113 CICGKIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACE 244
C ++Y PVC G Y +PC C + + + ++ T+C+
Sbjct: 538 CENARLY-PVCDQTGFAYFSPCHAGCREAMQYGSDPVLDFTSCQ 580
>Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical
protein B0250.4 protein.
Length = 480
Score = 27.9 bits (59), Expect = 3.2
Identities = 15/42 (35%), Positives = 19/42 (45%)
Frame = -1
Query: 278 HIPRYSSRGCPPRMRCFSRLSYCCVSCPFRSKIHTGSRTSYH 153
HI Y C P + SR +Y C CP R T S ++H
Sbjct: 248 HIMMYHLYICHPEQKMESRPTYFCDRCPMR--FGTESALNFH 287
>AF016687-11|ABL01528.1| 646|Caenorhabditis elegans Hypothetical
protein T21D12.7 protein.
Length = 646
Score = 27.5 bits (58), Expect = 4.3
Identities = 16/60 (26%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = -1
Query: 329 PVNICWRKFFR*SHRRGHIPRYSSRGCPPRMRCFSR----LSYCCVSCPFRSKIHTGSRT 162
PVN W + R+G R C F+ YC +CP ++H+ RT
Sbjct: 243 PVNTWWFDY-----RKGECKRAEHSNCEEHFNSFANQEQCADYCVGTCPNNLEVHSNPRT 297
>Z92811-3|CAB07274.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 228 KTPHARWASPATVPWNMPPSVALTEKLTPTNVHWNAP 338
+TP P T+P NMPPS + + P WN P
Sbjct: 848 QTPSWDHKPPPTMPANMPPS----KPVAPVTPGWNDP 880
>Z92789-9|CAB07223.1| 1083|Caenorhabditis elegans Hypothetical
protein T01G1.3 protein.
Length = 1083
Score = 27.1 bits (57), Expect = 5.6
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 228 KTPHARWASPATVPWNMPPSVALTEKLTPTNVHWNAP 338
+TP P T+P NMPPS + + P WN P
Sbjct: 848 QTPSWDHKPPPTMPANMPPS----KPVAPVTPGWNDP 880
>U58757-9|AAM75377.1| 503|Caenorhabditis elegans Hypothetical
protein C01B10.6b protein.
Length = 503
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Frame = +2
Query: 146 GSDGKTYENPC-EFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSN-----GKT 307
G +GK + + YCE K + T CE +P C + CG N G
Sbjct: 320 GDNGKCIVSQSGQQYCECKKCEFS-----GTNCETTLPDPCQSKQKRACGQNALSPYGVC 374
Query: 308 YANKCSLEC 334
Y N CS +C
Sbjct: 375 YKNICSDQC 383
>U58757-8|AAC47918.3| 506|Caenorhabditis elegans Hypothetical
protein C01B10.6a protein.
Length = 506
Score = 27.1 bits (57), Expect = 5.6
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 6/69 (8%)
Frame = +2
Query: 146 GSDGKTYENPC-EFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSN-----GKT 307
G +GK + + YCE K + T CE +P C + CG N G
Sbjct: 323 GDNGKCIVSQSGQQYCECKKCEFS-----GTNCETTLPDPCQSKQKRACGQNALSPYGVC 377
Query: 308 YANKCSLEC 334
Y N CS +C
Sbjct: 378 YKNICSDQC 386
>AL021475-1|CAA16312.1| 758|Caenorhabditis elegans Hypothetical
protein Y32F6B.1 protein.
Length = 758
Score = 26.2 bits (55), Expect = 9.8
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 CICGKI-YSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEV 247
C+C + PVC G Y +PC C N +I NT V
Sbjct: 516 CMCEQTPLYPVCDVSGSAYYSPCHAGCAMG--WKNYSIFDNTKATV 559
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,211,978
Number of Sequences: 27780
Number of extensions: 259476
Number of successful extensions: 764
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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