Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_P10
         (352 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   0.91 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   3.7  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   4.8  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   4.8  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   4.8  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 0.91
 Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = +2

Query: 179 IFNFTITHFEGWI---PTYTLAPLAFSRWILSM*TTNFLRY 292
           +F+F +T F  WI     Y ++ ++ + + L   +T  L+Y
Sbjct: 38  VFSFAVTFFSAWICALVNYNVSEISENFYYLPAMSTGPLKY 78


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 3.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 159  LFYGLYSSLTSQSHTLKGGYRRTHWLHW 242
            LF+GL   + +Q+  L  G  +   +HW
Sbjct: 1328 LFFGLNFLIITQAMFLVVGQLQASQIHW 1355


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 112 VFTKSR*PATSSAIQDCFTVFIHL*LHN 195
           V+ KS      S  +DC+ +F    LHN
Sbjct: 56  VYDKSIFAKLDSICEDCYMLFREPQLHN 83


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 112 VFTKSR*PATSSAIQDCFTVFIHL*LHN 195
           V+ KS      S  +DC+ +F    LHN
Sbjct: 56  VYDKSIFAKLDSICEDCYMLFREPQLHN 83


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 112 VFTKSR*PATSSAIQDCFTVFIHL*LHN 195
           V+ KS      S  +DC+ +F    LHN
Sbjct: 56  VYDKSIFAKLDSICEDCYMLFREPQLHN 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,485
Number of Sequences: 336
Number of extensions: 1387
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)