Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_P10
(352 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0323 - 2459854-2460306 83 5e-17
01_01_0263 + 2136858-2137331 81 2e-16
11_01_0317 - 2365493-2365786,2365825-2365953 81 3e-16
02_05_0671 - 30769631-30769803,30770535-30770873,30770952-307710... 28 2.4
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 28 2.4
05_07_0154 - 28059097-28060641 27 5.5
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760... 26 7.2
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113... 26 7.2
01_01_0381 - 2961422-2963917 26 7.2
07_03_1495 + 26983415-26984797 26 9.6
06_03_0713 + 23811483-23811846,23811964-23812019 26 9.6
04_04_0428 - 25149494-25149859 26 9.6
04_03_0822 - 20054832-20055179,20056794-20056847,20057561-200576... 26 9.6
>12_01_0323 - 2459854-2460306
Length = 150
Score = 83.4 bits (197), Expect = 5e-17
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = -2
Query: 351 EVQVVRGHXXXXXXXXXXXXXXXKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNK 172
EVQVVRG ++V+++ERI REK NG++V VGIHPSK V+ KLK++K
Sbjct: 54 EVQVVRG-SYKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDK 112
Query: 171 DRKTILDRRASGRLAALGKDKGKY 100
DRK ILDR+ASGR A K KGK+
Sbjct: 113 DRKAILDRKASGR--AADKAKGKF 134
>01_01_0263 + 2136858-2137331
Length = 157
Score = 81.4 bits (192), Expect = 2e-16
Identities = 44/84 (52%), Positives = 56/84 (66%)
Frame = -2
Query: 351 EVQVVRGHXXXXXXXXXXXXXXXKFVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNK 172
EVQVVRG ++V+++ERI REK NG++V VGIHPSK V+ KLK++K
Sbjct: 54 EVQVVRG-SYKGREGKVVQVYRRRWVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDK 112
Query: 171 DRKTILDRRASGRLAALGKDKGKY 100
DRK ILDR+A GR A K KGK+
Sbjct: 113 DRKAILDRKARGR--AADKAKGKF 134
>11_01_0317 - 2365493-2365786,2365825-2365953
Length = 140
Score = 80.6 bits (190), Expect = 3e-16
Identities = 38/60 (63%), Positives = 49/60 (81%)
Frame = -2
Query: 279 FVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILDRRASGRLAALGKDKGKY 100
+V+++ERI REK NG++V VGIHPSK V+ KLK++KDRK ILDR+ASGR A K KGK+
Sbjct: 64 WVIHVERITREKVNGSTVNVGIHPSKVVVTKLKLDKDRKAILDRKASGR--AADKAKGKF 121
>02_05_0671 -
30769631-30769803,30770535-30770873,30770952-30771036,
30771229-30771369,30771802-30771873,30772183-30772302,
30772606-30772677,30772758-30772895,30773249-30773320,
30773609-30773685,30773761-30773837,30773960-30774077,
30774852-30774930
Length = 520
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 114 LYQEPLACH*LCDPGLFYGLYSSLTSQSHTLKGGY 218
L +E + C CDPGL G+ S S S++ Y
Sbjct: 393 LVEELIGCLLKCDPGLSCGIVKSFISPSNSCPSHY 427
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 27.9 bits (59), Expect = 2.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 147 CDPGLFYGLYSSLTSQSHTLKGGYRRTHWLHWLSHAG 257
C G+ G+ +TS+ L+G RR H +HW H+G
Sbjct: 42 CKDGIVLGVEKLVTSKM-MLEGSNRRIHSVHW--HSG 75
>05_07_0154 - 28059097-28060641
Length = 514
Score = 26.6 bits (56), Expect = 5.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 274 SLHRKDPA*ESQWSQCVRRYP 212
+L +P+ ES W C+ RYP
Sbjct: 479 ALRNVNPSPESPWEDCIDRYP 499
>02_05_0373 +
28374298-28374380,28375126-28375303,28375975-28376065,
28376162-28376256,28376379-28376468,28376789-28376837,
28376941-28377079,28377224-28377340,28377437-28377527,
28377604-28377746,28378009-28378123,28378439-28378483,
28378565-28378645
Length = 438
Score = 26.2 bits (55), Expect = 7.2
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = +3
Query: 207 KGGYRRTHWLHWLSHAGSFRCR 272
K GY W+ +++ AGS+ R
Sbjct: 416 KSGYNTVEWVRYITRAGSYEIR 437
>02_01_0163 +
1135592-1135623,1135718-1135816,1135904-1135960,
1136053-1136116,1136174-1136392,1138562-1138945
Length = 284
Score = 26.2 bits (55), Expect = 7.2
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 158 IVLRSLFIFNFTITHFEGWIPTYTLAPLAF 247
I+L L +F +F W+P Y+ A LAF
Sbjct: 45 ILLAVLTVFERVGDNFVSWLPMYSEAKLAF 74
>01_01_0381 - 2961422-2963917
Length = 831
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = -2
Query: 213 HPSKCVIVKLKMNKDRKTILDRRASGRLAALGKDKGKY 100
HP+ ++ K+ +D+ T L+RR + + G G Y
Sbjct: 166 HPTDTLLPGAKLGRDKLTGLNRRLVSKKSMAGPSPGAY 203
>07_03_1495 + 26983415-26984797
Length = 460
Score = 25.8 bits (54), Expect = 9.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +3
Query: 162 FYGLYSSLTSQSHTLKGGYRR 224
F GL +LTSQS T+ YRR
Sbjct: 57 FGGLLKTLTSQSETVLEAYRR 77
>06_03_0713 + 23811483-23811846,23811964-23812019
Length = 139
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +3
Query: 246 SHAGSFRCRLQTSYG 290
+HAGSFRCRL G
Sbjct: 83 THAGSFRCRLHRGGG 97
>04_04_0428 - 25149494-25149859
Length = 121
Score = 25.8 bits (54), Expect = 9.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3
Query: 246 SHAGSFRCRLQTSYGTP 296
+H GSFRCRL G P
Sbjct: 32 THEGSFRCRLHRRGGMP 48
>04_03_0822 -
20054832-20055179,20056794-20056847,20057561-20057657,
20057752-20057780
Length = 175
Score = 25.8 bits (54), Expect = 9.6
Identities = 11/19 (57%), Positives = 15/19 (78%), Gaps = 2/19 (10%)
Frame = +3
Query: 246 SHAGSFRCRL--QTSYGTP 296
+HAGSF+CRL +S+G P
Sbjct: 132 THAGSFKCRLHRSSSHGHP 150
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,249,414
Number of Sequences: 37544
Number of extensions: 152319
Number of successful extensions: 363
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 518263348
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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