Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_P10
         (352 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68315-8|CAA92674.1|  142|Caenorhabditis elegans Hypothetical pr...    77   4e-15
Z68315-10|CAD59149.1|  109|Caenorhabditis elegans Hypothetical p...    45   1e-05
Z68315-9|CAA92678.1|  106|Caenorhabditis elegans Hypothetical pr...    45   1e-05
Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical p...    26   6.6  
U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.       26   6.6  
U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.       26   6.6  

>Z68315-8|CAA92674.1|  142|Caenorhabditis elegans Hypothetical
           protein F28C6.7a protein.
          Length = 142

 Score = 77.0 bits (181), Expect = 4e-15
 Identities = 32/60 (53%), Positives = 49/60 (81%)
 Frame = -2

Query: 279 FVVYIERIQREKANGASVYVGIHPSKCVIVKLKMNKDRKTILDRRASGRLAALGKDKGKY 100
           FV++I++I REKANG++V++GIHPSK  I KLK++KDR+ +++R+A+GR    G  KGK+
Sbjct: 77  FVIHIDKITREKANGSTVHIGIHPSKVAITKLKLDKDRRALVERKAAGRSRVTGILKGKH 136


>Z68315-10|CAD59149.1|  109|Caenorhabditis elegans Hypothetical
           protein F28C6.7c protein.
          Length = 109

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 17/26 (65%), Positives = 25/26 (96%)
 Frame = -2

Query: 279 FVVYIERIQREKANGASVYVGIHPSK 202
           FV++I++I REKANG++V++GIHPSK
Sbjct: 77  FVIHIDKITREKANGSTVHIGIHPSK 102


>Z68315-9|CAA92678.1|  106|Caenorhabditis elegans Hypothetical
           protein F28C6.7b protein.
          Length = 106

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 17/26 (65%), Positives = 25/26 (96%)
 Frame = -2

Query: 279 FVVYIERIQREKANGASVYVGIHPSK 202
           FV++I++I REKANG++V++GIHPSK
Sbjct: 77  FVIHIDKITREKANGSTVHIGIHPSK 102


>Z73971-10|CAA98251.1|  838|Caenorhabditis elegans Hypothetical
           protein C50H2.3 protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = +3

Query: 114 LYQEPLACH*LCDPGLFYGLYSSLTSQSHTLKGGYRRTHWLH-WLSHAGSFRC 269
           ++ + L C  LC+    Y   S L      LK       W H W    GS +C
Sbjct: 438 IFDDELTCQWLCESQPMYKSRSCLEDFDEGLKKECNGGRWRHQWYFDKGSKKC 490


>U33934-1|AAA96507.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = +3

Query: 114 LYQEPLACH*LCDPGLFYGLYSSLTSQSHTLKGGYRRTHWLH-WLSHAGSFRC 269
           ++ + L C  LC+    Y   S L      LK       W H W    GS +C
Sbjct: 438 IFDDELTCQWLCESQPMYKSRSCLEDFDEGLKKECNGGRWRHQWYFDKGSKKC 490


>U33933-1|AAA96506.1|  838|Caenorhabditis elegans MEC-9L protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 6.6
 Identities = 15/53 (28%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = +3

Query: 114 LYQEPLACH*LCDPGLFYGLYSSLTSQSHTLKGGYRRTHWLH-WLSHAGSFRC 269
           ++ + L C  LC+    Y   S L      LK       W H W    GS +C
Sbjct: 438 IFDDELTCQWLCESQPMYKSRSCLEDFDEGLKKECNGGRWRHQWYFDKGSKKC 490


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,843,423
Number of Sequences: 27780
Number of extensions: 128360
Number of successful extensions: 320
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 320
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 472561672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)