BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_P09
(356 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory recept... 29 0.014
AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory recept... 29 0.014
AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory recept... 29 0.014
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 22 1.6
DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory pro... 21 3.8
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 20 6.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 6.6
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 6.6
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 6.6
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 6.6
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 20 6.6
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 20 8.7
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 20 8.7
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 20 8.7
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 20 8.7
>AM292351-1|CAL23163.2| 394|Tribolium castaneum gustatory receptor
candidate 30 protein.
Length = 394
Score = 29.1 bits (62), Expect = 0.014
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 3 IMVKLINIFKSTHLCFYTSGFQSKYLFRRMCSSEP 107
I K +N+ ++ L FY SG S YL+ ++ P
Sbjct: 93 IFAKGLNVIEANRLFFYCSGLASGYLYLKLAMKWP 127
>AM292350-1|CAL23162.2| 429|Tribolium castaneum gustatory receptor
candidate 29 protein.
Length = 429
Score = 29.1 bits (62), Expect = 0.014
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 3 IMVKLINIFKSTHLCFYTSGFQSKYLFRRMCSSEP 107
I K +N+ ++ L FY SG S YL+ ++ P
Sbjct: 93 IFAKGLNVIEANRLFFYCSGLASGYLYLKLAMKWP 127
>AM292328-1|CAL23140.2| 429|Tribolium castaneum gustatory receptor
candidate 7 protein.
Length = 429
Score = 29.1 bits (62), Expect = 0.014
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 3 IMVKLINIFKSTHLCFYTSGFQSKYLFRRMCSSEP 107
I K +N+ ++ L FY SG S YL+ ++ P
Sbjct: 93 IFAKGLNVIEANRLFFYCSGLASGYLYLKLAMKWP 127
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 22.2 bits (45), Expect = 1.6
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2
Query: 101 RTKFKNNKCEED 136
R KF+N+ C+ED
Sbjct: 201 RPKFENSSCDED 212
>DQ855497-1|ABH88184.1| 127|Tribolium castaneum chemosensory
protein 11 protein.
Length = 127
Score = 21.0 bits (42), Expect = 3.8
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 47 LLYFRIPVQIFIPANVQFRTKFKNNKCEE 133
LL+F I + + N ++ TK+ N +E
Sbjct: 7 LLFFVIAIASSLAENSKYTTKYDNVDLDE 35
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 20.2 bits (40), Expect = 6.6
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = +2
Query: 206 DWSYKTRC 229
DW YK +C
Sbjct: 1248 DWKYKVKC 1255
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 6.6
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = +3
Query: 12 KLINIFKSTHLCFYTS 59
+L ++F+S+ +CF+ S
Sbjct: 143 QLGSLFRSSRMCFFKS 158
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 6.6
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = +3
Query: 12 KLINIFKSTHLCFYTS 59
+L ++F+S+ +CF+ S
Sbjct: 143 QLGSLFRSSRMCFFKS 158
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.2 bits (40), Expect = 6.6
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = +3
Query: 12 KLINIFKSTHLCFYTS 59
+L ++F+S+ +CF+ S
Sbjct: 143 QLGSLFRSSRMCFFKS 158
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.2 bits (40), Expect = 6.6
Identities = 6/16 (37%), Positives = 13/16 (81%)
Frame = +3
Query: 12 KLINIFKSTHLCFYTS 59
+L ++F+S+ +CF+ S
Sbjct: 143 QLGSLFRSSRMCFFKS 158
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 20.2 bits (40), Expect = 6.6
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +3
Query: 279 ITVKAVTASLNYSYNNEKYLLNLI 350
IT+ LNY++ + Y L ++
Sbjct: 38 ITINIRKNGLNYNFTKKCYFLRMV 61
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 19.8 bits (39), Expect = 8.7
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3
Query: 309 NYSYNNEKY 335
NY++NNE Y
Sbjct: 38 NYTHNNEMY 46
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 19.8 bits (39), Expect = 8.7
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3
Query: 309 NYSYNNEKY 335
NY++NNE Y
Sbjct: 38 NYTHNNEMY 46
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 19.8 bits (39), Expect = 8.7
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2
Query: 77 FIPANVQFRTKFK 115
F+ ANV +T+FK
Sbjct: 190 FVAANVILKTRFK 202
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 19.8 bits (39), Expect = 8.7
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3
Query: 309 NYSYNNEKY 335
NY++NNE Y
Sbjct: 38 NYTHNNEMY 46
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,748
Number of Sequences: 336
Number of extensions: 1706
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7193380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
- SilkBase 1999-2023 -