SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_P09
         (356 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    29   0.014
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    29   0.014
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    29   0.014
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    22   1.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   6.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   6.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   6.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   6.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    20   6.6  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    20   8.7  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    20   8.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    20   8.7  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           20   8.7  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 29.1 bits (62), Expect = 0.014
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 3   IMVKLINIFKSTHLCFYTSGFQSKYLFRRMCSSEP 107
           I  K +N+ ++  L FY SG  S YL+ ++    P
Sbjct: 93  IFAKGLNVIEANRLFFYCSGLASGYLYLKLAMKWP 127


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 29.1 bits (62), Expect = 0.014
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 3   IMVKLINIFKSTHLCFYTSGFQSKYLFRRMCSSEP 107
           I  K +N+ ++  L FY SG  S YL+ ++    P
Sbjct: 93  IFAKGLNVIEANRLFFYCSGLASGYLYLKLAMKWP 127


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 29.1 bits (62), Expect = 0.014
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 3   IMVKLINIFKSTHLCFYTSGFQSKYLFRRMCSSEP 107
           I  K +N+ ++  L FY SG  S YL+ ++    P
Sbjct: 93  IFAKGLNVIEANRLFFYCSGLASGYLYLKLAMKWP 127


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.2 bits (45), Expect = 1.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 101 RTKFKNNKCEED 136
           R KF+N+ C+ED
Sbjct: 201 RPKFENSSCDED 212


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 47  LLYFRIPVQIFIPANVQFRTKFKNNKCEE 133
           LL+F I +   +  N ++ TK+ N   +E
Sbjct: 7   LLFFVIAIASSLAENSKYTTKYDNVDLDE 35


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 5/8 (62%), Positives = 6/8 (75%)
 Frame = +2

Query: 206  DWSYKTRC 229
            DW YK +C
Sbjct: 1248 DWKYKVKC 1255


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 12  KLINIFKSTHLCFYTS 59
           +L ++F+S+ +CF+ S
Sbjct: 143 QLGSLFRSSRMCFFKS 158


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 12  KLINIFKSTHLCFYTS 59
           +L ++F+S+ +CF+ S
Sbjct: 143 QLGSLFRSSRMCFFKS 158


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 12  KLINIFKSTHLCFYTS 59
           +L ++F+S+ +CF+ S
Sbjct: 143 QLGSLFRSSRMCFFKS 158


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = +3

Query: 12  KLINIFKSTHLCFYTS 59
           +L ++F+S+ +CF+ S
Sbjct: 143 QLGSLFRSSRMCFFKS 158


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 279 ITVKAVTASLNYSYNNEKYLLNLI 350
           IT+      LNY++  + Y L ++
Sbjct: 38  ITINIRKNGLNYNFTKKCYFLRMV 61


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 309 NYSYNNEKY 335
           NY++NNE Y
Sbjct: 38  NYTHNNEMY 46


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 309 NYSYNNEKY 335
           NY++NNE Y
Sbjct: 38  NYTHNNEMY 46


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 77  FIPANVQFRTKFK 115
           F+ ANV  +T+FK
Sbjct: 190 FVAANVILKTRFK 202


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 309 NYSYNNEKY 335
           NY++NNE Y
Sbjct: 38  NYTHNNEMY 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,748
Number of Sequences: 336
Number of extensions: 1706
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)

- SilkBase 1999-2023 -