Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_P09
(356 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 103 5e-23
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 100 7e-22
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 68 3e-12
01_06_0662 + 30987187-30987277,30987825-30990214 63 5e-11
04_01_0103 + 1082077-1082167,1083037-1085477 62 2e-10
02_04_0017 + 18937774-18937864,18938505-18940945 62 2e-10
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 60 7e-10
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 58 2e-09
02_04_0148 - 20198407-20201424 53 6e-08
03_05_0511 + 25056018-25059107 52 2e-07
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 51 2e-07
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 51 3e-07
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 41 2e-04
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 41 2e-04
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 40 4e-04
02_04_0462 + 23131433-23132836 38 0.003
03_01_0548 + 4099386-4099847,4100435-4101316 36 0.007
03_01_0547 + 4093196-4093657,4094267-4095148 36 0.007
03_01_0544 + 4082528-4082989,4083585-4084466 36 0.007
03_01_0543 + 4076981-4077442,4078145-4079026 36 0.007
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 35 0.022
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 31 0.20
12_02_0867 - 23828084-23828845,23828931-23829067,23829148-238293... 30 0.47
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 30 0.47
08_01_0509 + 4433837-4434437,4434564-4434636,4435408-4437367,443... 30 0.61
07_03_0218 + 15305474-15306082,15306127-15306327,15306442-15306552 29 1.1
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 28 2.5
02_04_0175 + 20642877-20643618,20643844-20643955,20644052-206441... 27 4.3
12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045 26 7.6
01_06_0785 - 31985455-31988463 26 7.6
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 103 bits (246), Expect = 5e-23
Identities = 56/87 (64%), Positives = 65/87 (74%), Gaps = 11/87 (12%)
Frame = +3
Query: 129 KKIRNFSIVAHVDHGKSTLADRLLELTGVIKPGADHAQVLDQLQVERERGITVKAVTASL 308
+++RNFSI+AHVDHGKSTLADRLLELTG IK G Q LD+LQVERERGITVKA TA++
Sbjct: 55 ERVRNFSIIAHVDHGKSTLADRLLELTGTIKKGHGQPQYLDKLQVERERGITVKAQTATM 114
Query: 309 NYSY-NNE----------KYLLNLIDT 356
Y + NN+ YLLNLIDT
Sbjct: 115 FYRHANNQLPASDQPDAPSYLLNLIDT 141
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 99.5 bits (237), Expect = 7e-22
Identities = 46/79 (58%), Positives = 57/79 (72%)
Frame = +3
Query: 120 INVKKIRNFSIVAHVDHGKSTLADRLLELTGVIKPGADHAQVLDQLQVERERGITVKAVT 299
+ V IRNFSI+AH+DHGKSTLAD+LLELTG ++ Q LD + +ERERGIT+K
Sbjct: 72 VPVSNIRNFSIIAHIDHGKSTLADKLLELTGTVQKREMKQQFLDNMDLERERGITIKLQA 131
Query: 300 ASLNYSYNNEKYLLNLIDT 356
A + Y N+E Y LNLIDT
Sbjct: 132 ARMRYIMNDEPYCLNLIDT 150
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 67.7 bits (158), Expect = 3e-12
Identities = 33/79 (41%), Positives = 51/79 (64%)
Frame = +3
Query: 120 INVKKIRNFSIVAHVDHGKSTLADRLLELTGVIKPGADHAQVLDQLQVERERGITVKAVT 299
++ +IRN +++AHVDHGK+TL DRLL G P H + +D + +ERERGIT+ +
Sbjct: 59 LDPSRIRNVAVIAHVDHGKTTLMDRLLRQCGADIP---HERAMDSISLERERGITIASKV 115
Query: 300 ASLNYSYNNEKYLLNLIDT 356
S+++ N LN++DT
Sbjct: 116 TSVSWKENE----LNMVDT 130
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 63.3 bits (147), Expect = 5e-11
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 13/87 (14%)
Frame = +3
Query: 135 IRNFSIVAHVDHGKSTLADRLLELTGVI-KPGADHAQVLDQLQVERERGITVKAVTASLN 311
IRN S+VAHVDHGKSTL D L+ G+I + A ++ D E ERGIT+K+ SL
Sbjct: 19 IRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAERGITIKSTGISLY 78
Query: 312 YSYNNE------------KYLLNLIDT 356
Y ++E +YL+NLID+
Sbjct: 79 YEMSDESLKSYKGDRDGNEYLINLIDS 105
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 61.7 bits (143), Expect = 2e-10
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 13/87 (14%)
Frame = +3
Query: 135 IRNFSIVAHVDHGKSTLADRLLELTGVI-KPGADHAQVLDQLQVERERGITVKAVTASLN 311
IRN S++AHVDHGKSTL D L+ G+I + A ++ D E ERGIT+K+ SL
Sbjct: 19 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLF 78
Query: 312 YSYNNE------------KYLLNLIDT 356
Y ++E +YL+NLID+
Sbjct: 79 YEMSDESLKLYKGERDGNEYLINLIDS 105
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 61.7 bits (143), Expect = 2e-10
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 13/87 (14%)
Frame = +3
Query: 135 IRNFSIVAHVDHGKSTLADRLLELTGVI-KPGADHAQVLDQLQVERERGITVKAVTASLN 311
IRN S++AHVDHGKSTL D L+ G+I + A ++ D E ERGIT+K+ SL
Sbjct: 19 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAERGITIKSTGISLF 78
Query: 312 YSYNNE------------KYLLNLIDT 356
Y ++E +YL+NLID+
Sbjct: 79 YEMSDESLKLYKGERDGNEYLINLIDS 105
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 59.7 bits (138), Expect = 7e-10
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 13/87 (14%)
Frame = +3
Query: 135 IRNFSIVAHVDHGKSTLADRLLELTGVI-KPGADHAQVLDQLQVERERGITVKAVTASLN 311
IRN S++AHVDHGKSTL D L+ G+I + A ++ D E ERGIT+K+ SL
Sbjct: 19 IRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAERGITIKSTGISLY 78
Query: 312 Y--------SYNNEK----YLLNLIDT 356
Y S+ ++ YL+NLID+
Sbjct: 79 YEMTDAALRSFEGKRDGNSYLINLIDS 105
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 58.4 bits (135), Expect = 2e-09
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +3
Query: 129 KKIRNFSIVAHVDHGKSTLADRLLELTGVIKPG-ADHAQVLDQLQVERERGITVKAVTAS 305
+ +RN +IVAHVDHGK+TL D +L V + +++D +ERERGIT+ + S
Sbjct: 117 RDVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVVQERIMDSNDLERERGITILSKNTS 176
Query: 306 LNYSYNNEKYLLNLIDT 356
+ Y +N+IDT
Sbjct: 177 ITYKGTK----INIIDT 189
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 53.2 bits (122), Expect = 6e-08
Identities = 28/77 (36%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Frame = +3
Query: 90 MCSSEPSSKTINVKKIRNFSIVAHVDHGKSTLADRLLELTG----VIKPGADHAQVLDQL 257
M ++ +++ +++RN I+AHVDHGK++LAD L+ G V + A A+V+D L
Sbjct: 1 MAAAAAAAEGRGPRRVRNTCILAHVDHGKTSLADHLIAAYGSERRVSERMAGSARVMDHL 60
Query: 258 QVERERGITVKAVTASL 308
+ E+ R IT+K+ + +L
Sbjct: 61 EEEQRRAITMKSASIAL 77
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 51.6 bits (118), Expect = 2e-07
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Frame = +3
Query: 129 KKIRNFSIVAHVDHGKSTLADRLLEL--TGVIKPG-ADHAQVLDQLQVERERGITVKAVT 299
+++RN I+AHVDHGK+TLAD L+ G++ P A + +D L E+ R IT+K+
Sbjct: 8 RRVRNTCILAHVDHGKTTLADHLVASCGDGLVHPRLAGRLRFMDYLDEEQRRAITMKSAA 67
Query: 300 ASLNYSYNNEKYLLNLIDT 356
L++ + +NLID+
Sbjct: 68 VVLHHG----GHRVNLIDS 82
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 51.2 bits (117), Expect = 2e-07
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Frame = +3
Query: 123 NVKKIRNFSIVAHVDHGKSTLADRLLELTGVI----KPGADHAQVLDQLQVERERGITVK 290
N +RN ++V H+ HGK+ D L+E T + G H + D E+ER +++K
Sbjct: 144 NPALVRNVALVGHLQHGKTVFMDMLVEQTHEVDTFDSEGERHVRFTDTRVDEQERRVSIK 203
Query: 291 AVTASLNYSYNNEK-YLLNLIDT 356
AV SL N K YL N++DT
Sbjct: 204 AVPMSLVLEGGNGKSYLCNIMDT 226
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 50.8 bits (116), Expect = 3e-07
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 6/105 (5%)
Frame = +3
Query: 60 GFQSKYLFRRMCSSEPSSKTINVKKIRNFSIVAHVDHGKSTLADRLLELTGVIKP----- 224
G S R E + ++ ++RN I AH+D GK+TL +R+L TG I
Sbjct: 43 GMSSASALRARDEKEVARWRESMDRMRNIGISAHIDSGKTTLTERVLYYTGRIHEIHEVR 102
Query: 225 GADHAQV-LDQLQVERERGITVKAVTASLNYSYNNEKYLLNLIDT 356
G D +D + +ERE+GIT++ +A+ ++N Y +N+IDT
Sbjct: 103 GRDGVGAKMDSMDLEREKGITIQ--SAATYCTWNG--YQVNIIDT 143
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 41.1 bits (92), Expect = 2e-04
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVI----------------KPGADHAQVLDQLQVERE 272
N +IV HVD GKSTL+ RLL L G I K +A +D+ ERE
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERE 308
Query: 273 RGITVKAVTASLNYSYNNEKYLLNLIDT 356
RG+T+ A L +KY + L+D+
Sbjct: 309 RGVTMTVAVAYL----ETKKYRVVLLDS 332
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 41.1 bits (92), Expect = 2e-04
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVI----------------KPGADHAQVLDQLQVERE 272
N +IV HVD GKSTL+ RLL L G I K +A +D+ ERE
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERE 308
Query: 273 RGITVKAVTASLNYSYNNEKYLLNLIDT 356
RG+T+ A L +KY + L+D+
Sbjct: 309 RGVTMTVAVAYL----ETKKYRVVLLDS 332
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 40.3 bits (90), Expect = 4e-04
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +3
Query: 150 IVAHVDHGKSTLADRLLELTG---VIKPGADHAQVLDQLQVERERGITVKAVTASLNYSY 320
I+AH+D GK+T +R+L TG I + +D ++ E+ERGIT+ + + ++
Sbjct: 109 IMAHIDAGKTTTTERVLYYTGRNYKIGEFQEGTVTMDWMEQEQERGITITSPPTTAFWN- 167
Query: 321 NNEKYLLNLIDT 356
K+ +N+IDT
Sbjct: 168 ---KHRINIIDT 176
>02_04_0462 + 23131433-23132836
Length = 467
Score = 37.5 bits (83), Expect = 0.003
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRL-LELTGVIKPGADHAQVLDQLQVERERGITVKAVTASLNYS 317
N + HVDHGK+TL L + L V +D ER RGIT+ TA++ Y
Sbjct: 72 NIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARGITIN--TATVEYE 129
Query: 318 YNNEKY 335
Y
Sbjct: 130 TETRHY 135
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 36.3 bits (80), Expect = 0.007
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 16/87 (18%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVI---------KPGAD-------HAQVLDQLQVERE 272
N ++ HVD GKST L+ G I K A+ +A VLD+L+ ERE
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Query: 273 RGITVKAVTASLNYSYNNEKYLLNLID 353
RGIT+ + + KY +ID
Sbjct: 69 RGITIDIAL----WKFETTKYYCTVID 91
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 36.3 bits (80), Expect = 0.007
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 16/87 (18%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVI---------KPGAD-------HAQVLDQLQVERE 272
N ++ HVD GKST L+ G I K A+ +A VLD+L+ ERE
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Query: 273 RGITVKAVTASLNYSYNNEKYLLNLID 353
RGIT+ + + KY +ID
Sbjct: 69 RGITIDIAL----WKFETTKYYCTVID 91
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 36.3 bits (80), Expect = 0.007
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 16/87 (18%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVI---------KPGAD-------HAQVLDQLQVERE 272
N ++ HVD GKST L+ G I K A+ +A VLD+L+ ERE
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Query: 273 RGITVKAVTASLNYSYNNEKYLLNLID 353
RGIT+ + + KY +ID
Sbjct: 69 RGITIDIAL----WKFETTKYYCTVID 91
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 36.3 bits (80), Expect = 0.007
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 16/87 (18%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVI---------KPGAD-------HAQVLDQLQVERE 272
N ++ HVD GKST L+ G I K A+ +A VLD+L+ ERE
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Query: 273 RGITVKAVTASLNYSYNNEKYLLNLID 353
RGIT+ + + KY +ID
Sbjct: 69 RGITIDIAL----WKFETTKYYCTVID 91
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 34.7 bits (76), Expect = 0.022
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLE-LTGVIKPGADHAQVLDQLQVERERGITVKAVTASLNYS 317
N + HVDHGK+TL + + L K A +D+ E+ RGIT+ TA + Y
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARGITI--ATAHVEYE 126
Query: 318 YNNEKY 335
Y
Sbjct: 127 TAKRHY 132
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 31.5 bits (68), Expect = 0.20
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 147 SIVAHVDHGKSTLADRLLELTGVIKPGADHAQVLDQLQVERERGITV 287
+I+ HVDHGK++L D L + + K Q + VE G ++
Sbjct: 201 TIMGHVDHGKTSLLDSLRQTSVAAKEAGGITQHIGAFVVEMPSGASI 247
>12_02_0867 -
23828084-23828845,23828931-23829067,23829148-23829354,
23830226-23831027
Length = 635
Score = 30.3 bits (65), Expect = 0.47
Identities = 23/89 (25%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 96 SSEPSSKTINVKKIRNFSIVAHVDHGKSTLADR--LLELTGVIKPGADHAQVLDQLQVER 269
SS+PS T + ++R FS + STL+++ L L G +K + Q L ++E
Sbjct: 260 SSKPSKSTDLLARLRIFSTGVSIGIISSTLSNKNELDALKGTVKRMENLIQDLHD-ELEM 318
Query: 270 ERGITVKAVTASLNYSYNNEKYLLNLIDT 356
G+TVK + ++ ++++ ++ D+
Sbjct: 319 REGLTVKELPNEMSVKIDDDESKAHVTDS 347
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 30.3 bits (65), Expect = 0.47
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = +3
Query: 96 SSEPSSKTINVKKIRNFSIVAHVDHGKSTLADRLLELTGVIKPGADHAQVLDQLQVE 266
+ E S N IRN ++A HGK+ + D L+ G+ + L L E
Sbjct: 210 AEELHSIMCNKNNIRNVLVIADAGHGKTAILDSLVATAGITSQEVTESNSLISLYYE 266
>08_01_0509 +
4433837-4434437,4434564-4434636,4435408-4437367,
4437721-4437990,4438168-4438605,4438772-4439043,
4439126-4439274,4439339-4439470,4439554-4439880,
4439963-4440357,4440551-4440861,4441304-4441394,
4441806-4441847
Length = 1686
Score = 29.9 bits (64), Expect = 0.61
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Frame = +3
Query: 36 THLCFYTSGFQSKYLFRRMCSSEPS------SKTINVKKIRNFSIVAHVDHGKSTLADRL 197
T L F G SK+ RR+C+ + S ++N+ +R+ +I HV +G S
Sbjct: 464 TTLDFAEHGHISKFRVRRLCAKNHNEEKVNKSASLNLSHVRSLTIFQHV-NGTSLFVFPT 522
Query: 198 LELTGVIKPG--ADHAQVLDQL 257
L + + K G +H + +D+L
Sbjct: 523 LRVLDLSKSGLTENHLESIDKL 544
>07_03_0218 + 15305474-15306082,15306127-15306327,15306442-15306552
Length = 306
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -3
Query: 183 KCSCRDQHVPQY*NFESSSHLLFLNLVRNCTFAGINI 73
K + RD HVPQ+ + ++SS LL N ++ A + I
Sbjct: 194 KRNARDSHVPQFAHCKNSSSLLLFNFDKSKVLAPLPI 230
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 27.9 bits (59), Expect = 2.5
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 147 SIVAHVDHGKSTLADRLLELTGVIKPGADHAQVLDQLQV 263
+I+ HVDHGK+TL D + + V Q + QV
Sbjct: 431 TIMGHVDHGKTTLLDYIRKSKVVASEAGGITQGIGAYQV 469
>02_04_0175 +
20642877-20643618,20643844-20643955,20644052-20644174,
20644258-20644509,20644510-20644639,20644719-20644928,
20645280-20645426
Length = 571
Score = 27.1 bits (57), Expect = 4.3
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 198 LELTGVIKPGADHAQVLDQLQVERERGITVKAV 296
L+ VI G DH + +D+ Q E+E + V+A+
Sbjct: 232 LDCLRVIATGIDHPRTVDRGQAEKEFKVEVEAI 264
>12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045
Length = 1294
Score = 26.2 bits (55), Expect = 7.6
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 96 SSEPSSKTINVKKIRNFSIVAHVDHGKSTLADRLLE 203
S++ S ++ I S++ H GK+TLA R+ E
Sbjct: 226 STDASGNLMSTNHIPILSLIGHGGMGKTTLAQRVCE 261
>01_06_0785 - 31985455-31988463
Length = 1002
Score = 26.2 bits (55), Expect = 7.6
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +3
Query: 78 LFRRMCSSEPSSKTINVKKIRNFSIVAHVDHGKSTL 185
L+R+ SS+P++ +V ++R+F + K++L
Sbjct: 149 LYRKSSSSQPTTSATSVNRLRSFDVYIGFHGRKASL 184
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,376,772
Number of Sequences: 37544
Number of extensions: 153454
Number of successful extensions: 417
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 542368620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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