Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_P09
(356 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 100 6e-22
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 63 6e-11
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 56 7e-09
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 56 7e-09
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 52 9e-08
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 52 1e-07
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 52 1e-07
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 48 2e-06
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 48 2e-06
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 41 2e-04
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 41 2e-04
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 41 2e-04
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 38 0.003
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 38 0.003
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 38 0.003
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 38 0.003
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 34 0.025
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 34 0.025
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 33 0.044
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 33 0.044
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 31 0.18
Z75954-7|CAB00106.2| 492|Caenorhabditis elegans Hypothetical pr... 30 0.41
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 30 0.55
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 30 0.55
Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical pr... 28 1.7
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 28 2.2
U42439-4|AAA83508.1| 582|Caenorhabditis elegans Hypothetical pr... 28 2.2
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 27 3.9
AL023847-3|CAA19549.2| 309|Caenorhabditis elegans Hypothetical ... 27 3.9
Z82286-8|CAB05308.2| 487|Caenorhabditis elegans Hypothetical pr... 26 6.7
AF036703-4|AAB88555.1| 261|Caenorhabditis elegans Hypothetical ... 26 6.7
Z81527-5|CAB04273.2| 350|Caenorhabditis elegans Hypothetical pr... 26 8.9
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 26 8.9
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 99.5 bits (237), Expect = 6e-22
Identities = 53/75 (70%), Positives = 59/75 (78%)
Frame = +3
Query: 132 KIRNFSIVAHVDHGKSTLADRLLELTGVIKPGADHAQVLDQLQVERERGITVKAVTASLN 311
KIRNF IVAHVDHGKSTLADRLLE+ G + PG Q+LD+LQVERERGITVKA TA+L
Sbjct: 41 KIRNFGIVAHVDHGKSTLADRLLEMCGAVPPG--QKQMLDKLQVERERGITVKAQTAALR 98
Query: 312 YSYNNEKYLLNLIDT 356
+ YLLNLIDT
Sbjct: 99 H----RGYLLNLIDT 109
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 62.9 bits (146), Expect = 6e-11
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Frame = +3
Query: 78 LFRRMCSSEPSSKTINVKKIRNFSIVAHVDHGKSTLADRLLELTGVIKPGADHAQ----V 245
L R C S P K+RN ++AHVD GK+T+ +RLL L G I A H V
Sbjct: 7 LLSRRCYSTPPPPPAP-SKLRNIGVIAHVDAGKTTVTERLLYLAGAIHV-AGHVDKGNTV 64
Query: 246 LDQLQVERERGITVKAVTASLNYSYNNEKYLLNLIDT 356
D L +ERERGITV++ +L++ + + +NLIDT
Sbjct: 65 TDFLDIERERGITVQSAAVNLDW----KGHRINLIDT 97
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 56.0 bits (129), Expect = 7e-09
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +3
Query: 129 KKIRNFSIVAHVDHGKSTLADRLLELTGVIKPG-ADHAQVLDQLQVERERGITVKAVTAS 305
+ IRN S++AHVDHGKSTL D L+ G+I A + D + E+ER IT+K+ S
Sbjct: 17 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAIS 76
Query: 306 L 308
L
Sbjct: 77 L 77
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 56.0 bits (129), Expect = 7e-09
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Frame = +3
Query: 129 KKIRNFSIVAHVDHGKSTLADRLLELTGVIKPG-ADHAQVLDQLQVERERGITVKAVTAS 305
+ IRN S++AHVDHGKSTL D L+ G+I A + D + E+ER IT+K+ S
Sbjct: 17 RNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTAIS 76
Query: 306 L 308
L
Sbjct: 77 L 77
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 52.4 bits (120), Expect = 9e-08
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Frame = +3
Query: 66 QSKYLFRRMCSSE-PSSKTIN----VKKIRNFSIVAHVDHGKSTLADRLLELTG------ 212
Q + RR S+E PSS + +++IRN I AH+D GK+T+ +R+L G
Sbjct: 16 QLNNVLRRFASNEAPSSVVVPGVRPIERIRNIGISAHIDSGKTTVTERILYYAGRIDSMH 75
Query: 213 VIKPGADHAQVLDQLQVERERGITVKAVTASLNYSYNNEKYLLNLIDT 356
++ D +D + +ER+RGIT+++ +++ N +N+IDT
Sbjct: 76 EVRGKDDVGATMDFMDLERQRGITIQSAATYVDWHGTN----INIIDT 119
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 52.0 bits (119), Expect = 1e-07
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +3
Query: 108 SSKTINVKKIRNFSIVAHVDHGKSTLADRLLELTGVIKPG-ADHAQVLDQLQVERERGIT 284
++ T + IRN +VAHVDHGK++ AD L+ VI A + +D + E+ RGIT
Sbjct: 11 AAATKPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGIT 70
Query: 285 VKAVTASLNYSYNNEKYLLNLIDT 356
+K+ SL E L+NLID+
Sbjct: 71 MKSSGISLLC----EPLLINLIDS 90
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 52.0 bits (119), Expect = 1e-07
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +3
Query: 108 SSKTINVKKIRNFSIVAHVDHGKSTLADRLLELTGVIKPG-ADHAQVLDQLQVERERGIT 284
++ T + IRN +VAHVDHGK++ AD L+ VI A + +D + E+ RGIT
Sbjct: 11 AAATKPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMAGKLRYMDSREDEQTRGIT 70
Query: 285 VKAVTASLNYSYNNEKYLLNLIDT 356
+K+ SL E L+NLID+
Sbjct: 71 MKSSGISLLC----EPLLINLIDS 90
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 48.0 bits (109), Expect = 2e-06
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +3
Query: 135 IRNFSIVAHVDHGKSTLADRLLELT--GVIKPGADHAQVLDQLQVERERGITVKAVTASL 308
+RN +I H+ HGK+T D L+E T + A+ D L +E++RG ++K+ S+
Sbjct: 132 MRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQPVSI 191
Query: 309 NYSYNNEK-YLLNLIDT 356
+ K YLLN+IDT
Sbjct: 192 VAQDSRSKSYLLNIIDT 208
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 48.0 bits (109), Expect = 2e-06
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Frame = +3
Query: 135 IRNFSIVAHVDHGKSTLADRLLELT--GVIKPGADHAQVLDQLQVERERGITVKAVTASL 308
+RN +I H+ HGK+T D L+E T + A+ D L +E++RG ++K+ S+
Sbjct: 7 MRNVAIAGHLHHGKTTFLDCLMEQTHPEFYRAEDADARFTDILFIEKQRGCSIKSQPVSI 66
Query: 309 NYSYNNEK-YLLNLIDT 356
+ K YLLN+IDT
Sbjct: 67 VAQDSRSKSYLLNIIDT 83
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 41.1 bits (92), Expect = 2e-04
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 IMVKLINIFKSTHLCFYTSGFQSKYLFRRMCSSEPSSKTI--NVKKIRNFSIVAHVDHGK 176
++ + + +FK+ LC Q L + + P K + K N + HVDHGK
Sbjct: 5 LLSRNVGVFKTVTLC--EQKMQQVSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGK 62
Query: 177 STLADRLLELTGVIKPGADHAQV--LDQLQVERERGITVKA 293
+TL + ++ K GA + + +D E+ RGIT+ A
Sbjct: 63 TTLTSAITKILATSK-GAKYRKYEDIDNAPEEKARGITINA 102
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 41.1 bits (92), Expect = 2e-04
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 IMVKLINIFKSTHLCFYTSGFQSKYLFRRMCSSEPSSKTI--NVKKIRNFSIVAHVDHGK 176
++ + + +FK+ LC Q L + + P K + K N + HVDHGK
Sbjct: 6 LLSRNVGVFKTVTLC--EQKMQQVSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGK 63
Query: 177 STLADRLLELTGVIKPGADHAQV--LDQLQVERERGITVKA 293
+TL + ++ K GA + + +D E+ RGIT+ A
Sbjct: 64 TTLTSAITKILATSK-GAKYRKYEDIDNAPEEKARGITINA 103
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 41.1 bits (92), Expect = 2e-04
Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Frame = +3
Query: 3 IMVKLINIFKSTHLCFYTSGFQSKYLFRRMCSSEPSSKTI--NVKKIRNFSIVAHVDHGK 176
++ + + +FK+ LC Q L + + P K + K N + HVDHGK
Sbjct: 6 LLSRNVGVFKTVTLC--EQKMQQVSLMQARHLAVPGGKAVFKRDKPHLNVGTIGHVDHGK 63
Query: 177 STLADRLLELTGVIKPGADHAQV--LDQLQVERERGITVKA 293
+TL + ++ K GA + + +D E+ RGIT+ A
Sbjct: 64 TTLTSAITKILATSK-GAKYRKYEDIDNAPEEKARGITINA 103
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 37.5 bits (83), Expect = 0.003
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVI----------------KPGADHAQVLDQLQVERE 272
N ++ HVD GKST L+ G I K +A VLD+L+ ERE
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 273 RGITVKAVTASLNYSYNNEKYLLNLID 353
RGIT+ + + KY + +ID
Sbjct: 69 RGITIDIAL----WKFETAKYYITIID 91
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 37.5 bits (83), Expect = 0.003
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVI----------------KPGADHAQVLDQLQVERE 272
N ++ HVD GKST L+ G I K +A VLD+L+ ERE
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 273 RGITVKAVTASLNYSYNNEKYLLNLID 353
RGIT+ + + KY + +ID
Sbjct: 69 RGITIDIAL----WKFETAKYYITIID 91
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 37.5 bits (83), Expect = 0.003
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVI----------------KPGADHAQVLDQLQVERE 272
N ++ HVD GKST L+ G I K +A VLD+L+ ERE
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 273 RGITVKAVTASLNYSYNNEKYLLNLID 353
RGIT+ + + KY + +ID
Sbjct: 69 RGITIDIAL----WKFETAKYYITIID 91
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 37.5 bits (83), Expect = 0.003
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVI----------------KPGADHAQVLDQLQVERE 272
N ++ HVD GKST L+ G I K +A VLD+L+ ERE
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Query: 273 RGITVKAVTASLNYSYNNEKYLLNLID 353
RGIT+ + + KY + +ID
Sbjct: 69 RGITIDIAL----WKFETAKYYITIID 91
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 34.3 bits (75), Expect = 0.025
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 16/80 (20%)
Frame = +3
Query: 129 KKIRNFSIVAHVDHGKSTLADRLLELTGVI----------------KPGADHAQVLDQLQ 260
K + N +V HVD GKSTL LL V+ K +A VLD+ +
Sbjct: 168 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 227
Query: 261 VERERGITVKAVTASLNYSY 320
ERERG+T+ S S+
Sbjct: 228 EERERGVTMDIGRTSFETSH 247
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 34.3 bits (75), Expect = 0.025
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 16/80 (20%)
Frame = +3
Query: 129 KKIRNFSIVAHVDHGKSTLADRLLELTGVI----------------KPGADHAQVLDQLQ 260
K + N +V HVD GKSTL LL V+ K +A VLD+ +
Sbjct: 186 KDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETE 245
Query: 261 VERERGITVKAVTASLNYSY 320
ERERG+T+ S S+
Sbjct: 246 EERERGVTMDIGRTSFETSH 265
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 33.5 bits (73), Expect = 0.044
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVIKPGADHAQV--LDQLQVERERGITVKAVTASLNY 314
N + H+DHGK+TL + + K A H + +D+ + E++RGIT+ A + Y
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAK-KGFAKHIKFDEIDKGKEEKKRGITIN--VAHIGY 103
Query: 315 SYNNEKY 335
+Y
Sbjct: 104 ESPLRRY 110
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 33.5 bits (73), Expect = 0.044
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVIKPGADHAQV--LDQLQVERERGITVKAVTASLNY 314
N + H+DHGK+TL + + K A H + +D+ + E++RGIT+ A + Y
Sbjct: 47 NVGTIGHIDHGKTTLTSAITRVQAK-KGFAKHIKFDEIDKGKEEKKRGITIN--VAHIGY 103
Query: 315 SYNNEKY 335
+Y
Sbjct: 104 ESPLRRY 110
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 31.5 bits (68), Expect = 0.18
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 141 NFSIVAHVDHGKSTLADRLLELTGVI 218
N V HVD GKST+ +L+ LTG++
Sbjct: 111 NMVFVGHVDAGKSTIGGQLMFLTGMV 136
>Z75954-7|CAB00106.2| 492|Caenorhabditis elegans Hypothetical
protein F58H1.3a protein.
Length = 492
Score = 30.3 bits (65), Expect = 0.41
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 27 FKSTHLCFYTSGFQSKYLFRRMCSSEPSSKTINVKKIRNF 146
F+ CF S +L+R +C+S PSS + KI+NF
Sbjct: 254 FRMIIRCFQNLNQSSLHLYRGICTSRPSSSVFD--KIKNF 291
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 29.9 bits (64), Expect = 0.55
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 99 SEPSSKTINVKKIRNFSIVAHVDHGKSTLADRLLEL 206
+ P S + +V + N I+ HVD GK+TL R+ EL
Sbjct: 2 TSPPSTSSSVGPL-NLGILGHVDSGKTTLTRRIAEL 36
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 29.9 bits (64), Expect = 0.55
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 99 SEPSSKTINVKKIRNFSIVAHVDHGKSTLADRLLEL 206
+ P S + +V + N I+ HVD GK+TL R+ EL
Sbjct: 2 TSPPSTSSSVGPL-NLGILGHVDSGKTTLTRRIAEL 36
>Z73425-7|CAA97790.1| 1059|Caenorhabditis elegans Hypothetical protein
F12F6.5 protein.
Length = 1059
Score = 28.3 bits (60), Expect = 1.7
Identities = 23/89 (25%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Frame = +3
Query: 69 SKYLFRRMCSSEPSSKTINVKKIRNFSIVAHVDHGKSTL------ADRLLELTGVIKPGA 230
+KY+ CS P+ +TI++K+ ++ + + ++T ++ + TGV G
Sbjct: 903 TKYVSAASCSISPAPRTIDIKERKDSRDLLYAPITRATTVPANSGSNTEMNSTGVRPIG- 961
Query: 231 DHAQVLDQLQVERERGITVKAVTASLNYS 317
+ + DQLQ+ R+ T + SLN S
Sbjct: 962 -KSSLRDQLQLMRKENSTEMKPSTSLNGS 989
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 147 SIVAHVDHGKSTLADRL 197
+I+ HVDHGK+TL D +
Sbjct: 160 TIMGHVDHGKTTLLDAM 176
>U42439-4|AAA83508.1| 582|Caenorhabditis elegans Hypothetical
protein F19C7.2 protein.
Length = 582
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 42 LCFYTSGFQSKYLFRRMCSSEPSSKTINVKKIRNFSIVAHVDHGK 176
+CF Q YL ++ S K+ KKIR+FS+ + D K
Sbjct: 273 ICFPKESNQISYLIKKFQVDFSSVKSEPFKKIRHFSLCDNFDETK 317
>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
protein Y87G2A.5 protein.
Length = 1050
Score = 27.1 bits (57), Expect = 3.9
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
Frame = +3
Query: 63 FQSKYLFRRMCSSEPSSKTINVKKIRNFSIVAHVDHGKSTLAD----RLLELTG---VIK 221
F+ +Y+ + S P+ N + HV H +T + R + G +
Sbjct: 102 FKPEYIDKLNPGSNPADSFTVCIPPPNVTGNLHVGHALATTVEDTITRFNRMHGKRTLFN 161
Query: 222 PGADHAQVLDQLQVE----RERGIT 284
PG DHA + Q+ VE RERG+T
Sbjct: 162 PGCDHAGIATQVVVEKRLKRERGLT 186
>AL023847-3|CAA19549.2| 309|Caenorhabditis elegans Hypothetical
protein Y57A10C.7 protein.
Length = 309
Score = 27.1 bits (57), Expect = 3.9
Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -3
Query: 210 QSIPIICQLKCSCRDQHVPQY*NFESSSHLLFLNLVRNCTFAGI-NIWTGI 61
Q +P + C ++H Y ++ +++ +F+ L+ C FAGI I TG+
Sbjct: 159 QKVPNCATMACFV-NKHFLMYVSYSNTAAGIFIVLMSICVFAGIRKISTGV 208
>Z82286-8|CAB05308.2| 487|Caenorhabditis elegans Hypothetical
protein W02A2.5 protein.
Length = 487
Score = 26.2 bits (55), Expect = 6.7
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 136 FEILVLWHMLITARAL*LTDYWN 204
FEI WH+ I AR + D WN
Sbjct: 423 FEIYHYWHVRILARRARMRDPWN 445
>AF036703-4|AAB88555.1| 261|Caenorhabditis elegans Hypothetical
protein T11F8.1 protein.
Length = 261
Score = 26.2 bits (55), Expect = 6.7
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = -2
Query: 157 ATILKFRIFFTFIVFELGSELHIRRNKYL 71
ATIL +F+ + VF+L E H R N YL
Sbjct: 18 ATILAVILFYEYEVFDLSDEWH-RFNLYL 45
>Z81527-5|CAB04273.2| 350|Caenorhabditis elegans Hypothetical
protein F35E12.6 protein.
Length = 350
Score = 25.8 bits (54), Expect = 8.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3
Query: 162 HVPQY*NFESSSHLLFLNLVR 100
H PQY + +S+ L FLNL R
Sbjct: 202 HAPQYAIYSTSNTLTFLNLYR 222
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 25.8 bits (54), Expect = 8.9
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +3
Query: 3 IMVKLINIFKSTHLCFYT---SGFQSKYLFRRMCSSEPSSKTINVKKIRNFSIVAH 161
++V L+N ST C Y+ SGF + Y +C+ EP + K S A+
Sbjct: 255 LLVALLNALLST--CAYSNLNSGFAAVYSLNDLCTPEPCGEAAGNGKCIQTSATAY 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,878,748
Number of Sequences: 27780
Number of extensions: 155629
Number of successful extensions: 415
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 482051610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -