Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_P06
         (321 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY014957-1|AAK00511.1| 3031|Homo sapiens PI-3-kinase-related kin...    28   7.2  
AF395444-1|AAM73708.1| 3521|Homo sapiens PI-3-kinase ATX protein.      28   7.2  
AB061371-1|BAB70696.1| 3657|Homo sapiens phosphatidylinositol 3-...    28   7.2  
D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein.               27   9.5  
BC090929-1|AAH90929.1|  707|Homo sapiens LOC641298 protein protein.    27   9.5  
BC065223-1|AAH65223.1| 1136|Homo sapiens histocompatibility (min...    27   9.5  
BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein.        27   9.5  
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.              27   9.5  
AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibilit...    27   9.5  
AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein.        27   9.5  

>AY014957-1|AAK00511.1| 3031|Homo sapiens PI-3-kinase-related kinase
           SMG-1 protein.
          Length = 3031

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 281 HFDSLMHFPVLRFRTFGTLQKHCGTSH 201
           H D  +HFP +++    TL  HC T H
Sbjct: 20  HSDLAVHFPAIQYAVLYTLYSHC-TRH 45


>AF395444-1|AAM73708.1| 3521|Homo sapiens PI-3-kinase ATX protein.
          Length = 3521

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 281 HFDSLMHFPVLRFRTFGTLQKHCGTSH 201
           H D  +HFP +++    TL  HC T H
Sbjct: 510 HSDLAVHFPAIQYAVLYTLYSHC-TRH 535


>AB061371-1|BAB70696.1| 3657|Homo sapiens phosphatidylinositol
           3-kinase-related protein kinase protein.
          Length = 3657

 Score = 27.9 bits (59), Expect = 7.2
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 281 HFDSLMHFPVLRFRTFGTLQKHCGTSH 201
           H D  +HFP +++    TL  HC T H
Sbjct: 646 HSDLAVHFPAIQYAVLYTLYSHC-TRH 671


>D86976-1|BAA13212.1| 1165|Homo sapiens KIAA0223 protein.
          Length = 1165

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 230 TLQKHCGTSHSPDGGSISWTVGLSH 156
           +L +H   +  P  G+ SWT+G SH
Sbjct: 96  SLSRHASAAGFPLSGAASWTLGRSH 120


>BC090929-1|AAH90929.1|  707|Homo sapiens LOC641298 protein protein.
          Length = 707

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 281 HFDSLMHFPVLRFRTFGTLQKHCGTSH 201
           H D  +HFP +++    TL  HC T H
Sbjct: 82  HSDLAVHFPAIQYAVLYTLYPHC-TRH 107


>BC065223-1|AAH65223.1| 1136|Homo sapiens histocompatibility (minor)
           HA-1 protein.
          Length = 1136

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 230 TLQKHCGTSHSPDGGSISWTVGLSH 156
           +L +H   +  P  G+ SWT+G SH
Sbjct: 67  SLSRHASAAGFPLSGAASWTLGRSH 91


>BC035564-1|AAH35564.1| 1131|Homo sapiens HMHA1 protein protein.
          Length = 1131

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 230 TLQKHCGTSHSPDGGSISWTVGLSH 156
           +L +H   +  P  G+ SWT+G SH
Sbjct: 62  SLSRHASAAGFPLSGAASWTLGRSH 86


>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
          Length = 2448

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 16/64 (25%), Positives = 27/64 (42%)
 Frame = +1

Query: 91  PIRKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNVRNLKTGKCIK 270
           P+  CP    +  Y     +P+C + +  ++    G   V  C C      +  TGKC++
Sbjct: 700 PMTTCPKSM-TYHYHVSTCQPTCRSLSEGDITCSVGFIPVDGCICPKGTFLD-DTGKCVQ 757

Query: 271 LSKC 282
            S C
Sbjct: 758 ASNC 761


>AF308066-1|AAN04658.1| 1136|Homo sapiens minor histocompatibility
           antigen HA-1 protein.
          Length = 1136

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 230 TLQKHCGTSHSPDGGSISWTVGLSH 156
           +L +H   +  P  G+ SWT+G SH
Sbjct: 67  SLSRHASAAGFPLSGAASWTLGRSH 91


>AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein.
          Length = 1373

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 16/64 (25%), Positives = 27/64 (42%)
 Frame = +1

Query: 91  PIRKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNVRNLKTGKCIK 270
           P+  CP    +  Y     +P+C + +  ++    G   V  C C      +  TGKC++
Sbjct: 702 PMTTCPKSM-TYHYHVSTCQPTCRSLSEGDITCSVGFIPVDGCICPKGTFLD-DTGKCVQ 759

Query: 271 LSKC 282
            S C
Sbjct: 760 ASNC 763


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,330,160
Number of Sequences: 237096
Number of extensions: 992881
Number of successful extensions: 2736
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2736
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1569468906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)