Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_P02
(728 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 30 0.39
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 29 0.51
SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces pomb... 28 1.2
SPBC3D6.06c |||ribose-phosphate pyrophosphokinase |Schizosacchar... 27 2.7
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 27 3.6
SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1 |Schiz... 27 3.6
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 3.6
SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces ... 26 6.3
SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination ... 25 8.4
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 25 8.4
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 29.9 bits (64), Expect = 0.39
Identities = 45/190 (23%), Positives = 82/190 (43%), Gaps = 11/190 (5%)
Frame = +3
Query: 138 NMTSNEPNTETQEVLKN---EIKSLKEQCIDTCNVINNIPQ-VASTSNEDEAAERSLSYV 305
N T + T+ + L + E KSLK + N +++ + V S++ E A SL++
Sbjct: 380 NRTIHSQLTDAESKLSSFEQENKSLKGSIDEYQNNLSSKDKMVKQVSSQLEEARSSLAHA 439
Query: 306 EGVKTEIQNANAII---LKDEHLLTSHFFYDVKEKTAQIEELTAFTRGLVHDFDNEIRNL 476
G EI + +KD + + + +++E +A L+ D E+ NL
Sbjct: 440 TGKLAEINSERDFQNKKIKDFEKIEQDLRACLNSSSNELKEKSA----LIDKKDQELNNL 495
Query: 477 REQIRVAQEAKKMPXXXXXXXXXXXXXXXXE--RFFMMKGELHGLINSLYPD--SSDAII 644
REQI+ E KK+ E + + + +L+ L L + +S+ +
Sbjct: 496 REQIK---EQKKVSESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLS 552
Query: 645 NFLGTLMAER 674
+ L TL AE+
Sbjct: 553 SQLSTLAAEK 562
Score = 27.5 bits (58), Expect = 2.1
Identities = 23/111 (20%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Frame = +3
Query: 162 TETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSL-SYVEGVKTEIQNAN 338
TE ++ +NE SL + +D N + ++ + + +ED RSL V ++ E + +
Sbjct: 1607 TEELQLAENERLSLTTRMLDLQNQVKDLSNIKDSLSEDLRTLRSLEDSVASLQKECKIKS 1666
Query: 339 AIILKDEHLLTSHFFYDVKEKTAQIEELTAFTRGLVHDFDNEIRNLREQIR 491
+ + +LTS V+ + A++E+ + + + D+ +L +++
Sbjct: 1667 NTVESLQDVLTS-----VQARNAELEDEVSRSVDKIRRRDDRCEHLSGKLK 1712
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 29.5 bits (63), Expect = 0.51
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +3
Query: 315 KTEIQNANAIILKDEHLLTSHFFYDVKEKTAQIEELTAFTRGLVHDFDNEIRNLREQIRV 494
K EI N +A+ K EHL E +++E + ++ + NE+ R++I+
Sbjct: 110 KAEIYNRDALNTKQEHLDIKKRLEKSDETVCKLKEENENLQDMLRNVGNELVESRDEIKE 169
Query: 495 AQEAKKM 515
E +K+
Sbjct: 170 LIEKQKV 176
>SPAC2C4.17c |||MS ion channel protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 840
Score = 28.3 bits (60), Expect = 1.2
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -2
Query: 196 FISFFRTSWVSVLGSFDVMLIARRRPFSTVHRYLMKXNI 80
FISF TS+ ++L +F L++ FST + LM I
Sbjct: 461 FISFLDTSFATILAAFGTTLLSLSFVFSTSAQELMSSII 499
>SPBC3D6.06c |||ribose-phosphate pyrophosphokinase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 341
Score = 27.1 bits (57), Expect = 2.7
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = +3
Query: 192 IKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVKTEIQNANAIILKDEH 362
I+ +K CID V N PQ + S + + + ++ E ++ I N +I + +H
Sbjct: 281 IERVKLSCIDKLIVTNTAPQTITPSGCFDIIDVAPTFAEAIR-RIHNGESISILYDH 336
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 26.6 bits (56), Expect = 3.6
Identities = 12/40 (30%), Positives = 24/40 (60%)
Frame = +3
Query: 393 KEKTAQIEELTAFTRGLVHDFDNEIRNLREQIRVAQEAKK 512
K K+ ++EEL + R + ++I NLR+Q++ + +K
Sbjct: 19 KRKSKKMEELLSKQREECKELQSKITNLRKQLKEGNKKQK 58
>SPAC821.11 |pro1||gamma-glutamyl phosphate reductase Pro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 451
Score = 26.6 bits (56), Expect = 3.6
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 198 SLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVKTEIQNANAIILKDEHLL 368
SL+E + N N I Q S + D+A ++ + + K+E+ ANA +K LL
Sbjct: 2 SLEENVKEAKNAFN-ILQTLSVEDRDDALDKIVEELRIKKSEVLAANAEDMKAAKLL 57
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 3.6
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Frame = +3
Query: 153 EPNTETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYV----EGVKT 320
E + + +N +K + C +I+ S + + EAA+R + Y+ + V T
Sbjct: 104 ETSPHVYAIAENAYYQMKSYHENQCIIISG----ESGAGKTEAAKRIMQYITHVSKSVGT 159
Query: 321 EIQNANAIILKDEHLLTS 374
EI+ + IIL LL S
Sbjct: 160 EIERVSEIILATNPLLES 177
>SPBPB2B2.06c |||phosphoprotein phosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 601
Score = 25.8 bits (54), Expect = 6.3
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = -1
Query: 269 IRSGSNLRNVVNNIASIN 216
+ GSNLRN+ N+A++N
Sbjct: 479 LNGGSNLRNINENLAALN 496
>SPBC28F2.07 |sfr1|dds20, mug13|Swi five-dependent recombination
repair protein Sfr1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 25.4 bits (53), Expect = 8.4
Identities = 32/120 (26%), Positives = 54/120 (45%), Gaps = 3/120 (2%)
Frame = +3
Query: 165 ETQEVLKNEIKSLKEQCIDTCNVINNI-PQVASTS-NEDEAAERSLSYVEGVKTEIQNAN 338
E + +L KS Q N+ P +A T+ N DE S E V + ++
Sbjct: 98 EAKNILLKPFKSPLRQTASPQVADTNLKPSLAVTNLNSDETNTSS----EPVTSPLRTTP 153
Query: 339 AIILKDEHLLTSHFFYDVKEKT-AQIEELTAFTRGLVHDFDNEIRNLREQIRVAQEAKKM 515
I + + L S + K+ +I +L +R L + E+RNL+EQ+ A+ A+K+
Sbjct: 154 NSIKRQKRLFKSPISNCLNPKSDPEITQL--LSRRL--KLEKEVRNLQEQLITAETARKV 209
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 25.4 bits (53), Expect = 8.4
Identities = 18/73 (24%), Positives = 30/73 (41%)
Frame = +3
Query: 162 TETQEVLKNEIKSLKEQCIDTCNVINNIPQVASTSNEDEAAERSLSYVEGVKTEIQNANA 341
TE E+++ +K + I + + I +S N EA+E L V E+
Sbjct: 599 TEAAEIMRKRRNKVKPKGIKSEVASDKITD-SSPGNMSEASESELEEVFKNPKELSKKKT 657
Query: 342 IILKDEHLLTSHF 380
KD+ SH+
Sbjct: 658 TDFKDKEYYMSHY 670
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,713,678
Number of Sequences: 5004
Number of extensions: 50543
Number of successful extensions: 146
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 146
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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