Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_O19
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical pr... 91 6e-19
Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical pr... 87 1e-17
AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical... 85 4e-17
AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical... 85 4e-17
Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical pr... 80 1e-15
AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine syn... 71 6e-13
Z73422-3|CAA97766.1| 523|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC024832-7|AAL27257.1| 389|Caenorhabditis elegans Hypothetical ... 29 3.4
AC024832-6|AAL27256.1| 459|Caenorhabditis elegans Hypothetical ... 29 3.4
U41510-4|AAL11105.1| 371|Caenorhabditis elegans Hypothetical pr... 28 5.9
U41510-3|AAM69076.1| 411|Caenorhabditis elegans Hypothetical pr... 28 5.9
>Z82259-3|CAB05127.1| 368|Caenorhabditis elegans Hypothetical
protein C28D4.3 protein.
Length = 368
Score = 91.1 bits (216), Expect = 6e-19
Identities = 41/77 (53%), Positives = 50/77 (64%)
Frame = +2
Query: 248 LSKTLLGRYNDLPLPADKIIATYIWIDGTGEHLRCKDRTLNFIPCMPKNLPVWNFDGSST 427
L + + + LP K ATY+WIDGTGEHLR K RT+N P P+WN+DGSST
Sbjct: 12 LGQATIDHFMGLPAHPTKCQATYVWIDGTGEHLRAKTRTINTKPQYLSEYPIWNYDGSST 71
Query: 428 GQADGHNSDTFLVPRAI 478
GQADG NSD +L P A+
Sbjct: 72 GQADGLNSDRYLRPVAV 88
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 471 VQFYKDPFRRGNHILVMCDTY*YNMETTESNHRIRCPEGYDRCTD 605
V + DPF G ++LVMCDT + M+ T +NHR C E + +D
Sbjct: 86 VAVFPDPFLGGLNVLVMCDTLDHEMKPTATNHRQMCAELMKKVSD 130
>Z80223-3|CAB02317.1| 369|Caenorhabditis elegans Hypothetical
protein F26D10.10 protein.
Length = 369
Score = 86.6 bits (205), Expect = 1e-17
Identities = 39/77 (50%), Positives = 48/77 (62%)
Frame = +2
Query: 248 LSKTLLGRYNDLPLPADKIIATYIWIDGTGEHLRCKDRTLNFIPCMPKNLPVWNFDGSST 427
L + + + LP K ATY+WIDGTGE LR K RT N P P+WN+DGSST
Sbjct: 12 LGQATIDHFMGLPAHPSKCQATYVWIDGTGEQLRAKTRTFNLKPQYLSEYPIWNYDGSST 71
Query: 428 GQADGHNSDTFLVPRAI 478
GQA+G NSD +L P A+
Sbjct: 72 GQAEGLNSDRYLRPVAV 88
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 471 VQFYKDPFRRGNHILVMCDTY*YNMETTESNHRIRC 578
V + DPF +G+++LVMC+T M+ T +NHR C
Sbjct: 86 VAVFPDPFLQGHNVLVMCETLDETMKPTATNHRQNC 121
>AL110479-26|CAB54376.1| 385|Caenorhabditis elegans Hypothetical
protein Y105C5B.28b protein.
Length = 385
Score = 85.0 bits (201), Expect = 4e-17
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = +2
Query: 308 ATYIWIDGTGEHLRCKDRTLNFIPCMPKNLPVWNFDGSSTGQADGHNSDTFLVPRAI 478
A YIWIDG+GE++R K RT +F P P+ LP+WNFDGSSTGQA+G +SD +L P AI
Sbjct: 30 ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYLKPVAI 86
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +3
Query: 471 VQFYKDPFRRGNHILVMCDTY*YNMETTESNHRIRCPEGYDRCTD 605
V Y DPFR+G + LVMC+TY + T +N+R RC E ++ D
Sbjct: 84 VAIYPDPFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAAD 128
>AL110479-25|CAB60321.1| 388|Caenorhabditis elegans Hypothetical
protein Y105C5B.28a protein.
Length = 388
Score = 85.0 bits (201), Expect = 4e-17
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = +2
Query: 308 ATYIWIDGTGEHLRCKDRTLNFIPCMPKNLPVWNFDGSSTGQADGHNSDTFLVPRAI 478
A YIWIDG+GE++R K RT +F P P+ LP+WNFDGSSTGQA+G +SD +L P AI
Sbjct: 33 ALYIWIDGSGENIRAKTRTFDFEPTDPEKLPIWNFDGSSTGQAEGADSDVYLKPVAI 89
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = +3
Query: 471 VQFYKDPFRRGNHILVMCDTY*YNMETTESNHRIRCPEGYDRCTD 605
V Y DPFR+G + LVMC+TY + T +N+R RC E ++ D
Sbjct: 87 VAIYPDPFRQGKNKLVMCETYDNKKKPTATNYRQRCKEVMEKAAD 131
>Z29560-1|CAA82655.1| 367|Caenorhabditis elegans Hypothetical
protein K03H1.1 protein.
Length = 367
Score = 80.2 bits (189), Expect = 1e-15
Identities = 35/59 (59%), Positives = 45/59 (76%)
Frame = +2
Query: 299 KIIATYIWIDGTGEHLRCKDRTLNFIPCMPKNLPVWNFDGSSTGQADGHNSDTFLVPRA 475
KI ATY+WIDGTGE+LR K RT + +P ++ P+WN+DGSSTGQA G +SD +L P A
Sbjct: 29 KIQATYVWIDGTGENLRSKTRTFDKLPKRIEDYPIWNYDGSSTGQAKGRDSDRYLRPVA 87
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 471 VQFYKDPFRRGNHILVMCDTY*YNMETTESNHRIRCPE 584
V Y DPF G + LVMCDT + M+ T ++HR C E
Sbjct: 86 VAAYPDPFLGGGNKLVMCDTLDHQMQPTATSHRQACAE 123
>AC006618-2|AAK68249.1| 340|Caenorhabditis elegans Glutamine
synthetase (glutamate-ammonia ligase) protein 1 protein.
Length = 340
Score = 70.9 bits (166), Expect = 6e-13
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = +2
Query: 314 YIWIDGTGEHLRCKDRTLNFIPCMPKNLPVWNFDGSSTGQADGHNSDTFLVPRAI 478
YIWID T E++R K +T +F P P +LP+WNFDG+STGQ+ G SD ++ P A+
Sbjct: 35 YIWIDATQENMRGKTKTFDFEPKTPSDLPIWNFDGTSTGQSLGEGSDVYIRPIAL 89
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +3
Query: 471 VQFYKDPFRRGNHILVMCDTY*YNMETTESNHRIRCPEGYDRCTD 605
+ Y+DPFR G + + +C+T ++ + +N R +C + ++ D
Sbjct: 87 IALYRDPFRPGPNKIALCETLTHDNKPHPTNTRQQCVDNMEKAKD 131
>Z73422-3|CAA97766.1| 523|Caenorhabditis elegans Hypothetical
protein B0564.4 protein.
Length = 523
Score = 29.1 bits (62), Expect = 2.6
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -2
Query: 193 FYLCVSRIRHDSVHEYILHHRVTFRSVEERLIFTLLFKMCTVQFKI*H 50
F C S ++H SV + H R E R +LLF C +QFK H
Sbjct: 445 FTFCDS-VKHSSVR-VVGHDEQASRLQEHRADISLLFAFCNLQFKKNH 490
>AC024832-7|AAL27257.1| 389|Caenorhabditis elegans Hypothetical
protein Y57E12AL.1b protein.
Length = 389
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 197 NPKILSGPVLTNSPNAVLSKTLLGRYNDLPLPADKIIATYIW 322
NP ++S + T + KT G Y +PLPA I++ ++W
Sbjct: 227 NPSLIS--IFTGNSTDPSHKTDEGHYG-IPLPAQSIVSLFLW 265
>AC024832-6|AAL27256.1| 459|Caenorhabditis elegans Hypothetical
protein Y57E12AL.1a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 197 NPKILSGPVLTNSPNAVLSKTLLGRYNDLPLPADKIIATYIW 322
NP ++S + T + KT G Y +PLPA I++ ++W
Sbjct: 291 NPSLIS--IFTGNSTDPSHKTDEGHYG-IPLPAQSIVSLFLW 329
>U41510-4|AAL11105.1| 371|Caenorhabditis elegans Hypothetical
protein ZC449.3a protein.
Length = 371
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 282 KSLYRPSKVFESTALGELVNTGPDNIFGLS 193
K L+RPS V + L+N GPD+ F S
Sbjct: 87 KMLHRPSNVEMAVKQISLINNGPDDAFNKS 116
>U41510-3|AAM69076.1| 411|Caenorhabditis elegans Hypothetical
protein ZC449.3b protein.
Length = 411
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 282 KSLYRPSKVFESTALGELVNTGPDNIFGLS 193
K L+RPS V + L+N GPD+ F S
Sbjct: 127 KMLHRPSNVEMAVKQISLINNGPDDAFNKS 156
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,495,820
Number of Sequences: 27780
Number of extensions: 320581
Number of successful extensions: 671
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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