Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_O14
         (410 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70756-7|CAA94794.2|  199|Caenorhabditis elegans Hypothetical pr...    29   1.3  
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr...    29   1.7  
Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical p...    29   1.7  
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ...    29   1.7  
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.      29   1.7  
Z70756-8|CAA94795.2|  212|Caenorhabditis elegans Hypothetical pr...    28   2.3  
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ...    28   3.0  
U41557-6|AAA83307.1|  589|Caenorhabditis elegans Collagen sequen...    27   5.3  
AC006834-6|AAF40004.1|  233|Caenorhabditis elegans Hypothetical ...    27   5.3  
U13644-9|AAB52680.3|  492|Caenorhabditis elegans Cell death abno...    27   7.0  
AF061513-1|AAC24362.1|  492|Caenorhabditis elegans candidate ada...    27   7.0  
AF003141-14|AAM48549.1|  362|Caenorhabditis elegans Hypothetical...    27   7.0  
AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical...    27   7.0  
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    26   9.2  
AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical...    26   9.2  
AF036701-5|AAB88367.1|  125|Caenorhabditis elegans Hypothetical ...    26   9.2  
AF003386-6|AAK82897.1|  527|Caenorhabditis elegans Hypothetical ...    26   9.2  

>Z70756-7|CAA94794.2|  199|Caenorhabditis elegans Hypothetical
           protein T06E4.8 protein.
          Length = 199

 Score = 29.1 bits (62), Expect = 1.3
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +3

Query: 168 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 284
           V A P P F+ P+  P     PI  GPAF     P   P
Sbjct: 110 VFAAPRPVFASPALAPVAPMAPILRGPAFAYAPSPVLAP 148


>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
 Frame = +3

Query: 72  VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPF-FSQPSNGPSGN--YEPIST 242
           V  +D+ P      VH  +     + GNS  +   +P+P    +P++ P+ +    P   
Sbjct: 452 VRELDYRPYEKENGVHTPNAETNSTQGNSSPISTISPEPVTIVKPASTPATDSVSTPSVV 511

Query: 243 GPAFVDFNHPNYPPA-IRQPL 302
           GPAF     P  PP   R+P+
Sbjct: 512 GPAF-GKKVPEQPPVNFRKPI 531


>Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical
           protein C39E9.10 protein.
          Length = 488

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
 Frame = +1

Query: 73  CTWSIITLIIIQARFTWW-TIVVFHRTA 153
           CTW    L+ +    +WW   V+ H TA
Sbjct: 229 CTWGYTALVFVSGTLSWWEPTVIQHLTA 256


>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
           protein Y76A2B.1 protein.
          Length = 1057

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
 Frame = +3

Query: 72  VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPF-FSQPSNGPSGN--YEPIST 242
           V  +D+ P      VH  +     + GNS  +   +P+P    +P++ P+ +    P   
Sbjct: 452 VRELDYRPYEKENGVHTPNAETNSTQGNSSPISTISPEPVTIVKPASTPATDSVSTPSVV 511

Query: 243 GPAFVDFNHPNYPPA-IRQPL 302
           GPAF     P  PP   R+P+
Sbjct: 512 GPAF-GKKVPEQPPVNFRKPI 531


>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
          Length = 1057

 Score = 28.7 bits (61), Expect = 1.7
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
 Frame = +3

Query: 72  VHVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPF-FSQPSNGPSGN--YEPIST 242
           V  +D+ P      VH  +     + GNS  +   +P+P    +P++ P+ +    P   
Sbjct: 452 VRELDYRPYEKENGVHTPNAETNSTQGNSSPISTISPEPVTIVKPASTPATDSVSTPSVV 511

Query: 243 GPAFVDFNHPNYPPA-IRQPL 302
           GPAF     P  PP   R+P+
Sbjct: 512 GPAF-GKKVPEQPPVNFRKPI 531


>Z70756-8|CAA94795.2|  212|Caenorhabditis elegans Hypothetical
           protein T06E4.9 protein.
          Length = 212

 Score = 28.3 bits (60), Expect = 2.3
 Identities = 14/39 (35%), Positives = 17/39 (43%)
 Frame = +3

Query: 168 VIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPP 284
           V A P P F+ P+  P     P+  GPAF     P   P
Sbjct: 123 VFAAPRPVFAAPALAPVAPMAPVLRGPAFAYAPSPVLAP 161


>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
            protein F39C12.1 protein.
          Length = 5105

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -3

Query: 138  HHYCPPREPGLDYNQGYDRPR--ALCLRQPWPIR 43
            HH   PR   LD     D P   + C+++PWP +
Sbjct: 1649 HHIGIPRRASLDQFYRKDLPATCSACIKEPWPTK 1682


>U41557-6|AAA83307.1|  589|Caenorhabditis elegans Collagen sequence
           x-hybridizingprotein 1 protein.
          Length = 589

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 15/42 (35%), Positives = 18/42 (42%)
 Frame = +3

Query: 126 DNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPA 251
           D SG P  G          DP  +QPS GP G + P    P+
Sbjct: 291 DPSGAPPSGGPPGPF----DPSGAQPSGGPPGPFNPSGAPPS 328



 Score = 27.1 bits (57), Expect = 5.3
 Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
 Frame = +3

Query: 126 DNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAF---VDFNHPNYPPAIRQ 296
           D SG P  G          DP  + PS GP G ++P    P+      FN    PP+   
Sbjct: 366 DPSGAPPSGGPPGPF----DPSGAPPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGP 421

Query: 297 PLPW 308
           P P+
Sbjct: 422 PGPF 425


>AC006834-6|AAF40004.1|  233|Caenorhabditis elegans Hypothetical
           protein ZK973.9 protein.
          Length = 233

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
 Frame = +3

Query: 75  HVVDHNPDYNPGQVHVVDNSGVPSDGNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAF 254
           H+    P ++P Q H     G+P+  +   ++     P    P   P G   P   G   
Sbjct: 93  HLQQQQPQHSPQQGHPHPQQGLPAAHHRQQMMPPQAAPSPGGPMQPPHGFAPPPMGGGVP 152

Query: 255 VD-FNHPNYPPAIRQ 296
            +  NH  Y   +RQ
Sbjct: 153 PEMMNHQAYQAQMRQ 167


>U13644-9|AAB52680.3|  492|Caenorhabditis elegans Cell death
           abnormality protein 6 protein.
          Length = 492

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +3

Query: 186 PFFSQPSNGPSGNYEPISTGPAF-VDFNHPNYPPAIRQPLP 305
           P  S  SNG S +  P ST P+       P  PPA+  P P
Sbjct: 291 PQISTSSNGASPSVSPASTSPSGPAPSIPPPRPPALAPPPP 331


>AF061513-1|AAC24362.1|  492|Caenorhabditis elegans candidate
           adaptor protein CED-6 protein.
          Length = 492

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = +3

Query: 186 PFFSQPSNGPSGNYEPISTGPAF-VDFNHPNYPPAIRQPLP 305
           P  S  SNG S +  P ST P+       P  PPA+  P P
Sbjct: 291 PQISTSSNGASPSVSPASTSPSGPAPSIPPPRPPALAPPPP 331


>AF003141-14|AAM48549.1|  362|Caenorhabditis elegans Hypothetical
           protein W02D3.11b protein.
          Length = 362

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 180 PDPFFSQPSNGPSGNYEPIS 239
           P PF S P   P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238


>AF003141-13|AAK21490.1|  549|Caenorhabditis elegans Hypothetical
           protein W02D3.11a protein.
          Length = 549

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 180 PDPFFSQPSNGPSGNYEPIS 239
           P PF S P   P G Y+P S
Sbjct: 219 PPPFASAPQTAPRGAYDPYS 238


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
            protein Y53C10A.10 protein.
          Length = 1582

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
 Frame = +3

Query: 177  NPDPFFSQPS-NGPSGNYEPISTGPAFVDFNHPNYPPAIRQPLP 305
            NP P    PS NGPS   +P   GP+    N PN P    +P P
Sbjct: 939  NPGPGPGPPSPNGPSDPNKPSPNGPSP---NGPNGPSDPNKPGP 979


>AL033514-32|CAA22112.1|  344|Caenorhabditis elegans Hypothetical
           protein Y75B8A.34 protein.
          Length = 344

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -3

Query: 363 SSFLLVLKSLIFMRHLLPTTGEVVVSLVDNW 271
           S  ++ ++S    RH LPTTG + +    NW
Sbjct: 177 SCAVICIRSSSIERHFLPTTGFINIETKLNW 207


>AF036701-5|AAB88367.1|  125|Caenorhabditis elegans Hypothetical
           protein ZC416.2 protein.
          Length = 125

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 174 ANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPAI 290
           A P P++   +  P G+    + GP    + +PN P  I
Sbjct: 10  AQPQPYYGNANYAPQGSNPYPAQGPYPQGYYNPNQPQVI 48


>AF003386-6|AAK82897.1|  527|Caenorhabditis elegans Hypothetical
           protein F59E12.4a protein.
          Length = 527

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = +3

Query: 150 GNSDHVVIANPDPFFSQPSNGPSG 221
           GN D  VI N DPF    S G  G
Sbjct: 476 GNDDIPVIPNGDPFSGSSSGGSGG 499


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,770,214
Number of Sequences: 27780
Number of extensions: 221778
Number of successful extensions: 549
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)