Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_O14
         (410 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   1.0  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    23   1.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   4.1  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   5.4  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 12/50 (24%), Positives = 20/50 (40%)
 Frame = +3

Query: 150 GNSDHVVIANPDPFFSQPSNGPSGNYEPISTGPAFVDFNHPNYPPAIRQP 299
           GN+  + I  P P   +         EP +  P ++    P +P   R+P
Sbjct: 71  GNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREP 120


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +3

Query: 246 PAFVDFNHPNYPPAIRQPLPWWEV 317
           P     +HP Y   +++ LPW E+
Sbjct: 325 PYVYAISHPKYRLELQKRLPWLEL 348


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +1

Query: 37  SSPYWPWLPQTECTWSIITLIIIQA 111
           S+P W + P    TW  I ++++ A
Sbjct: 549 SAPVWRFQPWGPFTWGGIGVVVLFA 573


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = +3

Query: 69  RVHVVDHNPDYNPGQVHV 122
           R + +  +PD + GQ+H+
Sbjct: 897 RFYSISSSPDVHQGQIHL 914


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,400
Number of Sequences: 438
Number of extensions: 3033
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10379628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)