Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_O10
         (484 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA...   222   2e-58
AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p pro...   220   9e-58
AY069595-1|AAL39740.1|  912|Drosophila melanogaster LD34564p pro...    29   4.4  
AE014297-599|AAF54029.1|  410|Drosophila melanogaster CG10029-PA...    28   5.8  
AF492764-2|AAM11674.1|  849|Drosophila melanogaster pol protein ...    25   8.6  

>AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA
           protein.
          Length = 172

 Score =  222 bits (542), Expect = 2e-58
 Identities = 101/126 (80%), Positives = 112/126 (88%)
 Frame = +1

Query: 1   GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPFGDKKSYTLYLKDYMKKLVAKLEEKA 180
           G N SAEEADEGTD   E+GVD+VLNHRL E + FGDKKSYTLYLKDYMKK++AKLEEK+
Sbjct: 46  GANASAEEADEGTDITSESGVDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKS 105

Query: 181 PDQVDIFKTNMNKVMKDILARFKDLQFFTGESMDCDGMVAMMEYRNINGTDVPFMMFFKH 360
           PDQVDIFKTNMNK MKDIL RFK+LQFFTGESMDCDGMVA++EYR ING  VP +MFFKH
Sbjct: 106 PDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKH 165

Query: 361 GLDEEK 378
           GL+EEK
Sbjct: 166 GLEEEK 171


>AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p
           protein.
          Length = 172

 Score =  220 bits (537), Expect = 9e-58
 Identities = 100/126 (79%), Positives = 111/126 (88%)
 Frame = +1

Query: 1   GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPFGDKKSYTLYLKDYMKKLVAKLEEKA 180
           G N SAEEADEGTD   E+GVD+VLNHRL E + FGDKKSYTLYL DYMKK++AKLEEK+
Sbjct: 46  GANASAEEADEGTDITSESGVDVVLNHRLTECFAFGDKKSYTLYLNDYMKKVLAKLEEKS 105

Query: 181 PDQVDIFKTNMNKVMKDILARFKDLQFFTGESMDCDGMVAMMEYRNINGTDVPFMMFFKH 360
           PDQVDIFKTNMNK MKDIL RFK+LQFFTGESMDCDGMVA++EYR ING  VP +MFFKH
Sbjct: 106 PDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKH 165

Query: 361 GLDEEK 378
           GL+EEK
Sbjct: 166 GLEEEK 171


>AY069595-1|AAL39740.1|  912|Drosophila melanogaster LD34564p
           protein.
          Length = 912

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = -2

Query: 348 HHEWYIGTIDISVLHHGDHAITVHGFTCEELKILKPSEYVLHYFVH 211
           +H+ Y+G   + VL   DH    +   C+   +L+ S Y++ + VH
Sbjct: 187 YHKKYMGLSGMPVLRCQDHDSLTNYVWCDHDTLLRTSTYLVAFAVH 232


>AE014297-599|AAF54029.1|  410|Drosophila melanogaster CG10029-PA
           protein.
          Length = 410

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 23/104 (22%), Positives = 45/104 (43%)
 Frame = +1

Query: 67  IVLNHRLVETYPFGDKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKVMKDILARF 246
           I+ ++ LV    + D   ++  L+   ++  AK+ +K P+   +    +N   +DILA  
Sbjct: 40  IIDSNELVLLSFYTDWCRFSQILQPIFEEAAAKVIQKFPENGRVILGKVNCDTEDILADQ 99

Query: 247 KDLQFFTGESMDCDGMVAMMEYRNINGTDVPFMMFFKHGLDEEK 378
            D+  +    +  +G++   EYR     +  F    K   D  K
Sbjct: 100 FDILKYPTIKIVRNGLIGNQEYRGQRSVEALFQFVEKELSDPIK 143


>AF492764-2|AAM11674.1|  849|Drosophila melanogaster pol protein
           protein.
          Length = 849

 Score = 24.6 bits (51), Expect(2) = 8.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 223 MKDILARFKDLQFFTGESM 279
           + ++L RFKD+QF  G+ +
Sbjct: 134 LTNLLTRFKDIQFHEGDKL 152



 Score = 21.4 bits (43), Expect(2) = 8.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 112 KKSYTLYLKDYMKKLVAKLEEKAPDQVD 195
           KK+ TL+ K Y  K   KL ++   QVD
Sbjct: 74  KKTATLFNKVYKIKDTEKLTDQNHAQVD 101


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,001,077
Number of Sequences: 53049
Number of extensions: 420988
Number of successful extensions: 1030
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1684597257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)