Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_O10
(484 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 104 4e-23
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical pr... 30 0.77
Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical pr... 30 0.77
AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein. 30 0.77
AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm transme... 30 0.77
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 29 1.8
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 29 1.8
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 29 1.8
AF016449-6|AAG23999.1| 331|Caenorhabditis elegans Seven tm rece... 29 1.8
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 29 2.3
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 29 2.3
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 28 3.1
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ... 28 3.1
Z81111-3|CAB03267.1| 334|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z68010-3|CAA92011.1| 558|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z67756-4|CAA91765.1| 558|Caenorhabditis elegans Hypothetical pr... 27 7.1
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr... 27 7.1
AF005246-1|AAB95119.1| 556|Caenorhabditis elegans voltage-depen... 27 7.1
U46671-4|AAA85749.1| 429|Caenorhabditis elegans Hypothetical pr... 27 9.4
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 9.4
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 9.4
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 104 bits (249), Expect = 4e-23
Identities = 58/135 (42%), Positives = 85/135 (62%), Gaps = 9/135 (6%)
Frame = +1
Query: 1 GFNPSAEEA--DEGTDSNVETGVDIVLNHRLVETYPFGDKKSYTLYLKDYMKKLVAKLEE 174
G NPSAEE D+G+D +VE G+DIVLNH+LVE + D + Y+K +MK ++ +E+
Sbjct: 46 GSNPSAEEGAEDDGSDEHVERGIDIVLNHKLVEMNCYEDASMFKAYIKKFMKNVIDHMEK 105
Query: 175 KAPDQ--VDIFKTNMNKVMKDILA--RFKDLQFFTGESM---DCDGMVAMMEYRNINGTD 333
D+ VD FK + + +LA RFK+L FF GE +G VA++EYR+++GT+
Sbjct: 106 NNRDKADVDAFKKKIQGWVVSLLAKDRFKNLAFFIGERAAEGAENGQVAIIEYRDVDGTE 165
Query: 334 VPFMMFFKHGLDEEK 378
VP +M K + EEK
Sbjct: 166 VPTLMLVKEAIIEEK 180
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 30.7 bits (66), Expect = 0.58
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = +1
Query: 148 KKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFKDLQFFTGESMDCDGMVAMMEYRNING 327
K L+A + + DI KTN+ K M + AR + L+ E ++A E RNI
Sbjct: 692 KDLLATMTIETLKAADIEKTNLKKRMNEQDARIRQLEREKKEGERIRSIIAKWEKRNIPK 751
Query: 328 TD 333
T+
Sbjct: 752 TE 753
>Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 585 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 619
>Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 585 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 619
>AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 571 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm
transmembrane protein protein.
Length = 661
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 1 GFNPSAEEADEGTDSNVETGVDIVLNHRLVETYPF 105
GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 585 GFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 619
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 294 HAITVHGFTCEELKILKPSEYVLHYFVHVRLEYINL 187
H I H FT E+LK+L+ + V Y V+ + +L
Sbjct: 391 HLIIEHAFTYEQLKVLETVKIVSEYITIVQQNFYDL 426
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 294 HAITVHGFTCEELKILKPSEYVLHYFVHVRLEYINL 187
H I H FT E+LK+L+ + V Y V+ + +L
Sbjct: 391 HLIIEHAFTYEQLKVLETVKIVSEYITIVQQNFYDL 426
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 294 HAITVHGFTCEELKILKPSEYVLHYFVHVRLEYINL 187
H I H FT E+LK+L+ + V Y V+ + +L
Sbjct: 442 HLIIEHAFTYEQLKVLETVKIVSEYITIVQQNFYDL 477
>AF016449-6|AAG23999.1| 331|Caenorhabditis elegans Seven tm
receptor protein 40 protein.
Length = 331
Score = 29.1 bits (62), Expect = 1.8
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +1
Query: 46 NVETGVDIVLNHRLVETYPFGDKKSYTLYLKDYMKKLVAKLEEK 177
N+E G + LN L++ YP D ++ L + +Y +K+++K +K
Sbjct: 274 NIEIGFNPALNCALLQIYPPIDSIAFMLIVSEY-RKIISKTLKK 316
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 112 KKSYTLYLKDYMKKLVAKLEEK 177
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 112 KKSYTLYLKDYMKKLVAKLEEK 177
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +1
Query: 112 KKSYTLYLKDYMKKLVAKLEEK 177
+K+Y YL+++MK LVA + EK
Sbjct: 754 EKTYKQYLREFMKSLVALMSEK 775
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 353 SNMVLMKRSSKAYAYTA*VKLLIIPYQTCCRFY 451
+N+ L ++ K Y+Y A + + I PYQT FY
Sbjct: 83 NNIRLRYQNGKIYSYVANILISINPYQTIDGFY 115
>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform b protein.
Length = 1144
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 353 SNMVLMKRSSKAYAYTA*VKLLIIPYQTCCRFY 451
+N+ L ++ K Y+Y A + + I PYQT FY
Sbjct: 83 NNIRLRYQNGKIYSYVANILISINPYQTIDGFY 115
>Z81111-3|CAB03267.1| 334|Caenorhabditis elegans Hypothetical
protein T01G5.3 protein.
Length = 334
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Frame = -2
Query: 423 IMSSFTYAVYAYAL----ELLFIKTMFEEHHEWYIGTIDISVLHHGDHAITV 280
+M+ + YA Y + L L+++T+F E + I ++I + +GD +I +
Sbjct: 142 LMAIWFYAAYVFVLAQKESRLYLETIFREKFDQDINDLNIVIALYGDASIEI 193
>Z48544-2|CAA88437.1| 766|Caenorhabditis elegans Hypothetical
protein ZK945.3 protein.
Length = 766
Score = 27.9 bits (59), Expect = 4.1
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 109 DKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFK 249
+KK+ L L +K + K+EEKA K+ ++K +KD L R K
Sbjct: 22 EKKAKGLKLNKVDRKRIVKIEEKA-----ALKSKVDKAVKDELERLK 63
>Z68010-3|CAA92011.1| 558|Caenorhabditis elegans Hypothetical
protein R07A4.1 protein.
Length = 558
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 16 AEEADEGTDSNVETGVDIVL 75
+E +DEGT+S+ TGVD V+
Sbjct: 524 SENSDEGTNSSSTTGVDTVV 543
>Z67756-4|CAA91765.1| 558|Caenorhabditis elegans Hypothetical
protein R07A4.1 protein.
Length = 558
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 16 AEEADEGTDSNVETGVDIVL 75
+E +DEGT+S+ TGVD V+
Sbjct: 524 SENSDEGTNSSSTTGVDTVV 543
>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical protein
C25H3.8 protein.
Length = 2148
Score = 27.1 bits (57), Expect = 7.1
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -2
Query: 339 WYIGTIDISVLHHGDHAITV-HGFTCEELKILKPSEYVLHYFVHVRLEYINLV 184
WY GT+D+ + H G +TV +L++LK ++ Y ++ + ++++
Sbjct: 1794 WYFGTLDLEMGHVGLSVVTVSKSGLPRDLRLLK-QQFNKFYLAELQKQTLSII 1845
>AF005246-1|AAB95119.1| 556|Caenorhabditis elegans
voltage-dependent potassium channelalpha subunit
protein.
Length = 556
Score = 27.1 bits (57), Expect = 7.1
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +1
Query: 16 AEEADEGTDSNVETGVDIVL 75
+E +DEGT+S+ TGVD V+
Sbjct: 522 SENSDEGTNSSSTTGVDTVV 541
>U46671-4|AAA85749.1| 429|Caenorhabditis elegans Hypothetical
protein C14E2.4 protein.
Length = 429
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 217 KVMKDILARFKDLQFFTGESMDCDGMVAMMEYRNINGTDVP 339
K + D L K+L+ + + DG +A YR NGT P
Sbjct: 102 KQVSDYLELLKNLKMNEQKVVRDDGEIAYSTYRQANGTITP 142
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 26.6 bits (56), Expect = 9.4
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 94 TYPFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFKDLQ 258
T+ FG D++ Y++ +KD KKL + E+ I TN K + + K+L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 26.6 bits (56), Expect = 9.4
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +1
Query: 94 TYPFG--DKKSYTLYLKDYMKKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFKDLQ 258
T+ FG D++ Y++ +KD KKL + E+ I TN K + + K+L+
Sbjct: 11103 TFNFGQKDQEQYSMVMKDVSKKLARQNAEEIQSGKLIPTTNEEKTGLALTGKNKNLK 11159
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,942,992
Number of Sequences: 27780
Number of extensions: 221381
Number of successful extensions: 727
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -