Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_O10
         (484 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.3  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.3  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.0  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   9.1  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 405 YAVYAYALELLFIKTMFEEHHE 340
           Y    YALELL +KT   E  E
Sbjct: 2   YGFVNYALELLVVKTFDSETWE 23


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 11/22 (50%), Positives = 12/22 (54%)
 Frame = -2

Query: 405 YAVYAYALELLFIKTMFEEHHE 340
           Y    YALELL +KT   E  E
Sbjct: 2   YGFVNYALELLVVKTFDSETWE 23


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 301 MMEYRNINGTDVPFMMFFKHGL 366
           M+E R++  +  PF +  KHGL
Sbjct: 94  MLELRDLPISGKPFQIRMKHGL 115


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +1

Query: 139 DYMKKLVAKLEEKAPDQVDIFKTNMNKVMKDILARFKDLQ 258
           ++ K+L    E    DQ+ + K   ++VM   +AR  D+Q
Sbjct: 391 EFSKRLPGFDELMREDQIALLKACSSEVMMLRMARKYDVQ 430


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,708
Number of Sequences: 438
Number of extensions: 2688
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)