Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_O09
         (534 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    21   6.0  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   6.0  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    21   6.0  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   7.9  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   7.9  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   7.9  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   7.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.9  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   7.9  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 8   ILILMLYTRLI*TLANH 58
           I I++ Y+RL+ ++ NH
Sbjct: 234 IFIILFYSRLLSSIRNH 250


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 199 LRLRPSSAGVRKRFHLDSRQQRQG 128
           LR   SSA + K +   S QQR+G
Sbjct: 23  LRTSFSSAKLEKLYRASSLQQRRG 46


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 8   ILILMLYTRLI*TLANH 58
           I I++ Y+RL+ ++ NH
Sbjct: 234 IFIILFYSRLLSSIRNH 250


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 471 VTIVKSYAVFWVGIESVPVKV 533
           + +  S+  FW+   +VP +V
Sbjct: 313 ILVTSSFITFWLEWNAVPARV 333


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 471 VTIVKSYAVFWVGIESVPVKV 533
           + +  S+  FW+   +VP +V
Sbjct: 282 ILVTSSFITFWLEWNAVPARV 302


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 471 VTIVKSYAVFWVGIESVPVKV 533
           + +  S+  FW+   +VP +V
Sbjct: 333 ILVTSSFITFWLEWNAVPARV 353


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/21 (28%), Positives = 12/21 (57%)
 Frame = +3

Query: 471 VTIVKSYAVFWVGIESVPVKV 533
           + +  S+  FW+   +VP +V
Sbjct: 282 ILVTSSFITFWLEWNAVPARV 302


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 152  QMEPLPYTCTTGSQSQKRDHPGWTERPQL 238
            Q  P  Y+C T S  Q++  P  + +P+L
Sbjct: 1266 QHAPPAYSCGTVSVPQQQQLPPSSPQPRL 1294


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -1

Query: 102 RTRSRRYAERDASA 61
           R+RSRRY++R +S+
Sbjct: 18  RSRSRRYSKRFSSS 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,162
Number of Sequences: 438
Number of extensions: 3261
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)