Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_O08
(450 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 25 0.29
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 24 0.67
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 2.0
DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate r... 23 2.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 4.7
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 6.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 6.2
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 6.2
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 6.2
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 6.2
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 8.2
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 8.2
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 8.2
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 25.4 bits (53), Expect = 0.29
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 124 YYTPERNPKEADYTAPIYAPQN 189
Y+ E++PK+ T P APQN
Sbjct: 302 YFRAEKDPKKMPCTQPPSAPQN 323
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 24.2 bits (50), Expect = 0.67
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 220 INYWIQNGAPTHKLVLGIST--TGRTWKLDSDSEISGV 327
+++WI A + ++ LGI+T T T LDS +++ V
Sbjct: 264 VSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPKV 301
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.6 bits (46), Expect = 2.0
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +1
Query: 220 INYWIQNGAPTHKLVLGIST 279
+++WI + A + ++ LGI+T
Sbjct: 261 VSFWINHEATSARVALGITT 280
>DQ468657-1|ABE02558.1| 322|Apis mellifera 1,4,5-trisphosphate
receptor protein.
Length = 322
Score = 22.6 bits (46), Expect = 2.0
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 238 NGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADEGGEAGSLYQ 375
+GA K +STT K S ++ PP+HAD+ E + Q
Sbjct: 222 DGATPRKAPPQLSTTD---KKGSAIDLDIGPPLHADQAEEYKKIQQ 264
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 4.7
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -2
Query: 392 KLNLELWYKDPASPPSSACIGGTPEISLSESSFHVRPV 279
+L + Y+D + P + I +S S H RP+
Sbjct: 1293 RLTVNHAYRDAVTVPGNNLIATNTTVSSGSSEDHRRPL 1330
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 6.2
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +1
Query: 220 INYWIQNGAPTHKLVLGIST 279
+++W+ A ++ LG++T
Sbjct: 240 VSFWLNRNATPARVALGVTT 259
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 6.2
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +1
Query: 220 INYWIQNGAPTHKLVLGIST 279
+++W+ A ++ LG++T
Sbjct: 240 VSFWLNRNATPARVALGVTT 259
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +2
Query: 17 ICS*LSAFCQT*IAPFTLTS 76
IC+ L+A CQ + F +TS
Sbjct: 644 ICTKLTADCQPGVTAFIVTS 663
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.0 bits (42), Expect = 6.2
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +1
Query: 220 INYWIQNGAPTHKLVLGIST 279
+++W+ A ++ LG++T
Sbjct: 179 VSFWLNRNATPARVALGVTT 198
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 6.2
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -3
Query: 214 RRRFVEDRGSAVRKSVQCSPPLWGYVQVY 128
R+ + EDR +R+ P + QVY
Sbjct: 14 RQVYGEDRWEEIRRQASVEQPSFSVHQVY 42
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 20.6 bits (41), Expect = 8.2
Identities = 6/20 (30%), Positives = 13/20 (65%)
Frame = +1
Query: 220 INYWIQNGAPTHKLVLGIST 279
+++W+ A ++ LGI+T
Sbjct: 233 VSFWLNREATADRVSLGITT 252
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.6 bits (41), Expect = 8.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 97 DIVNIQAFDYYTPERNP 147
D+V FD+Y PE P
Sbjct: 337 DMVGRSLFDFYHPEDLP 353
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 20.6 bits (41), Expect = 8.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 97 DIVNIQAFDYYTPERNP 147
D+V FD+Y PE P
Sbjct: 43 DMVGRSLFDFYHPEDLP 59
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.314 0.134 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,847
Number of Sequences: 438
Number of extensions: 2607
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.0 bits)
- SilkBase 1999-2023 -