Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_O05
         (510 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.                 30   4.1  
AC000121-1|AAB46357.2|  248|Homo sapiens unknown protein.              30   4.1  

>U79716-1|AAC51105.1| 3460|Homo sapiens reelin protein.
          Length = 3460

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = +2

Query: 8   PSSVKDLIHVKELPESFREELIRNRTKSESLPLA*PYLVSFISKKYLVTNTS 163
           PS+V  +IH+  LPE  + E ++ + K E+L +   Y   +     L+ N++
Sbjct: 303 PSNVSTIIHILYLPEDAKGENVQFQWKQENLRVGEVYEACWALDNILIINSA 354


>AC000121-1|AAB46357.2|  248|Homo sapiens unknown protein.
          Length = 248

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = +2

Query: 8   PSSVKDLIHVKELPESFREELIRNRTKSESLPLA*PYLVSFISKKYLVTNTS 163
           PS+V  +IH+  LPE  + E ++ + K E+L +   Y   +     L+ N++
Sbjct: 121 PSNVSTIIHILYLPEDAKGENVQFQWKQENLRVGEVYEACWALDNILIINSA 172


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,508,768
Number of Sequences: 237096
Number of extensions: 1119248
Number of successful extensions: 1676
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1676
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)