Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_O02
         (541 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC19A8.03 |||phosphatidylinositol-3-phosphatase |Schizosacchar...    29   0.44 
SPAC6G10.03c |||abhydrolase family protein, unknown biological r...    28   0.77 
SPAC9E9.06c |||threonine synthase |Schizosaccharomyces pombe|chr...    27   1.3  
SPBC365.01 |||sec14 cytosolic factor family |Schizosaccharomyces...    27   1.3  
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c...    27   2.3  
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe...    27   2.3  
SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces pombe...    26   4.1  
SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase Ran1|Schi...    25   5.4  
SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyc...    25   5.4  
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||...    25   7.2  
SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|ch...    25   9.5  
SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+ antip...    25   9.5  
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3...    25   9.5  

>SPAC19A8.03 |||phosphatidylinositol-3-phosphatase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 559

 Score = 29.1 bits (62), Expect = 0.44
 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -3

Query: 470 GKRIHTMTSSSVRNPPK-SPASKLQTTY 390
           GKRI T+ SS    PP+ SP+S LQ T+
Sbjct: 394 GKRIFTIDSSYSEEPPQSSPSSTLQYTF 421


>SPAC6G10.03c |||abhydrolase family protein, unknown biological
           role|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 428

 Score = 28.3 bits (60), Expect = 0.77
 Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
 Frame = +2

Query: 161 KDYWCVAVDMRGYGDSERP----EG-VCYYKIE----ILIEDIRDLVRKLGREKCILVSH 313
           KD+    VD  G G+S RP    +G     K+E       E +       G EK ILV H
Sbjct: 120 KDFNSYFVDWLGMGNSSRPPFDIKGQTASEKVEETERFFTESLETWRIGHGIEKMILVGH 179

Query: 314 DWGGLVASKVRDVHPDIVSGLIMLGSMS 397
             GG +++     +P+ V  L+++  ++
Sbjct: 180 SMGGYLSAVYAMQYPERVEKLLLVSPVA 207


>SPAC9E9.06c |||threonine synthase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 514

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 427 GFRTDEDVMVCILFPNARVTRV 492
           G R  +DV V ILFPN RV+ +
Sbjct: 164 GLRGKKDVSVFILFPNGRVSPI 185


>SPBC365.01 |||sec14 cytosolic factor family |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 355

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 10/25 (40%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
 Frame = -1

Query: 169 IIFIEFNNLMPPKNTR-IQEIRVKI 98
           I+F+  +N +PPKNT+ ++E++  I
Sbjct: 118 IVFLNLHNFIPPKNTKDMEELKALI 142


>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 436

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -3

Query: 299 CIFRVLIYEQGLLYLRLISLFYN 231
           C+F VL+  +GL+YL L   F N
Sbjct: 309 CLFGVLMIARGLIYLALFRNFLN 331


>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 734

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -3

Query: 281 IYEQGLLYLRLISLFYNNKLLQAFLNLHS 195
           ++ + L+ ++ I + + N LLQ+F NLHS
Sbjct: 149 LFREKLMAVKNIQIPFLNSLLQSFENLHS 177


>SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 551

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 12/21 (57%), Positives = 16/21 (76%)
 Frame = -3

Query: 368 LQYPDVRLALYLLRDHPSRER 306
           LQ PD ++ALY L+D+  RER
Sbjct: 403 LQLPDEQIALY-LKDYQGRER 422


>SPBC19C2.05 |ran1|pat1|serine/threonine protein kinase
           Ran1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 470

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 76  DPTKPLMIFLHGFPEFWYSWAAS 144
           DPT PL   +H    FW S AA+
Sbjct: 385 DPTTPLTAPIHATESFWPSAAAA 407


>SPBPB2B2.09c |||2-dehydropantoate 2-reductase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 350

 Score = 25.4 bits (53), Expect = 5.4
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 296 IFRVLIYEQGLLYLRLISLFYNNKLLQAFLNLHSL 192
           +FR +I E   ++ + I LF NN+  +  LN++ L
Sbjct: 243 LFRCIIKECVDIFFKCIPLFKNNEEAEKILNVNRL 277


>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 923

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 414 CIQASDDILPNIMRPLTISGCTSRTLLATRPPQS*ETRMHFSRPNLRT 271
           C  + DD   +  + +T    TS+T+  T+PPQS E +   S  N +T
Sbjct: 175 CGDSMDDTFFSESQRVTSPLTTSQTV-QTQPPQSPEAKTELSLINTKT 221


>SPBC2F12.03c |||EST1 family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 891

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -3

Query: 467 KRIHTMTSSSVRNPPKSPASKLQTTYC 387
           KR+  + S S+++   S +S LQ TYC
Sbjct: 464 KRVRFLLSESLKSGLFSESSLLQMTYC 490


>SPAC3A11.09 |sod22||plasma membrane alkali metal cation/H+
           antiporter Sod22|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 759

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 374 DHLQYPDVRLALYLLRDHPSRER-RECIFRVLIYE 273
           D +  P + LA+YL+ + P+R   R+ +  +++YE
Sbjct: 177 DGMAIPFLYLAIYLIIEKPARHAGRDWVCIIILYE 211


>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 334

 Score = 24.6 bits (51), Expect = 9.5
 Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
 Frame = -3

Query: 296 IFRVLIYEQGLLYLRL----ISLFYNNKLLQAFLNLHSLSCPQQR 174
           +FR+ +Y  G+  L +    I+ F   +L +A +NLH L+  +++
Sbjct: 76  LFRISLYILGVFSLYMFRWAIAWFCEKRLSRARMNLHKLNAEKRK 120


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,438,835
Number of Sequences: 5004
Number of extensions: 53972
Number of successful extensions: 141
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 221892220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)