Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_O02
(541 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 23 2.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 4.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 4.6
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 21 6.1
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 21 6.1
AF213011-1|AAG43567.1| 62|Apis mellifera esterase A2 protein. 21 6.1
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 21 8.1
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 21 8.1
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 21 8.1
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 21 8.1
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 8.1
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 21 8.1
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 22.6 bits (46), Expect = 2.6
Identities = 16/77 (20%), Positives = 31/77 (40%)
Frame = +2
Query: 302 LVSHDWGGLVASKVRDVHPDIVSGLIMLGSMSSEAWMQEIWEGSVQMRMSWYVFFFRMPG 481
+V +W +K+ ++P I ++ + A M + + + M W + G
Sbjct: 217 MVKLNWPKKRVTKMSSINPCIFDNATIVNNGPEAAKMAKAFTYTYNYSMYWGQGHAILKG 276
Query: 482 LPELFMLMNDLPMFNIM 532
L +LMN + IM
Sbjct: 277 LKTSIILMNGTTLPQIM 293
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 143 DAAQEYQNSGNPCKNIIRGFVGSPLST 63
D + ++ NP IR G+P+ST
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPIST 376
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 143 DAAQEYQNSGNPCKNIIRGFVGSPLST 63
D + ++ NP IR G+P+ST
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPIST 376
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 143 DAAQEYQNSGNPCKNIIRGFVGSPLST 63
D + ++ NP IR G+P+ST
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPIST 376
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 143 DAAQEYQNSGNPCKNIIRGFVGSPLST 63
D + ++ NP IR G+P+ST
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPIST 376
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 143 DAAQEYQNSGNPCKNIIRGFVGSPLST 63
D + ++ NP IR G+P+ST
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPIST 376
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 143 DAAQEYQNSGNPCKNIIRGFVGSPLST 63
D + ++ NP IR G+P+ST
Sbjct: 350 DDIRHKNSAANPPSGYIRSAFGTPIST 376
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 143 DAAQEYQNSGNPCKNIIRGFVGSPLST 63
D + ++ NP IR G+P+ST
Sbjct: 418 DDIRHKNSAANPPSGYIRSAFGTPIST 444
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 4.6
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 143 DAAQEYQNSGNPCKNIIRGFVGSPLST 63
D + ++ NP IR G+P+ST
Sbjct: 418 DDIRHKNSAANPPSGYIRSAFGTPIST 444
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 355 MYVSHFTCYETTPVVRDENAFFAS*FTN 272
+Y S C+ T NAFF F+N
Sbjct: 252 LYKSTLHCWATIYKTEGGNAFFKGAFSN 279
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 355 MYVSHFTCYETTPVVRDENAFFAS*FTN 272
+Y S C+ T NAFF F+N
Sbjct: 252 LYKSTLHCWATIYKTEGGNAFFKGAFSN 279
>AF213011-1|AAG43567.1| 62|Apis mellifera esterase A2 protein.
Length = 62
Score = 21.4 bits (43), Expect = 6.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +1
Query: 61 YVESGDPTKPLMIFLH 108
Y S D +KP+M ++H
Sbjct: 10 YTNSLDQSKPVMFYVH 25
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = +1
Query: 16 YGVHKYIKVNNIKLHYVESGDPTKPLMIFLHGFP 117
Y + Y K+ ++Y+E P+ I+ FP
Sbjct: 102 YNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFP 135
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = +1
Query: 16 YGVHKYIKVNNIKLHYVESGDPTKPLMIFLHGFP 117
Y + Y K+ ++Y+E P+ I+ FP
Sbjct: 102 YNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFP 135
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = +1
Query: 16 YGVHKYIKVNNIKLHYVESGDPTKPLMIFLHGFP 117
Y + Y K+ ++Y+E P+ I+ FP
Sbjct: 102 YNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFP 135
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/34 (26%), Positives = 16/34 (47%)
Frame = +1
Query: 16 YGVHKYIKVNNIKLHYVESGDPTKPLMIFLHGFP 117
Y + Y K+ ++Y+E P+ I+ FP
Sbjct: 102 YNNNNYKKLQYYNINYIEQIPIPVPVPIYCGNFP 135
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.0 bits (42), Expect = 8.1
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +2
Query: 101 FYTDFLNSGILGRHQIVEFNKD 166
F +++N G+ +H I+E + +
Sbjct: 58 FNLNYVNKGVTYKHTIIEMDSN 79
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 21.0 bits (42), Expect = 8.1
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +3
Query: 456 MYSFSECQGYPS 491
++ F +C GYPS
Sbjct: 16 VFLFDKCSGYPS 27
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,615
Number of Sequences: 438
Number of extensions: 4749
Number of successful extensions: 19
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15336375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -