Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_O01
(543 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 203 8e-53
03_05_1066 + 30098780-30098866,30099139-30099225,30099318-300994... 195 2e-50
11_04_0205 + 14860857-14861534,14862585-14862975,14863069-148631... 189 1e-48
05_04_0394 - 20906923-20907146,20907251-20907340,20908380-209087... 167 4e-42
01_06_1521 + 37956131-37957204,37958560-37958962,37959370-379594... 166 1e-41
12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,752... 43 1e-04
01_05_0572 + 23356737-23357705,23357811-23357957,23358048-23358443 29 3.2
07_03_1784 - 29492511-29492804,29492913-29492999,29493076-294932... 28 5.5
01_06_1668 + 38998348-38998434,38999234-38999300,38999377-389994... 27 7.3
03_05_0209 + 22014556-22015308 27 9.7
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 203 bits (495), Expect = 8e-53
Identities = 95/148 (64%), Positives = 114/148 (77%), Gaps = 1/148 (0%)
Frame = +2
Query: 101 NEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGTIMGLDLPD 280
NE IDE+E L + R+L + L+PE WGVNVQPYSGSPANFA YTG+++PH IMGLDLP
Sbjct: 25 NEVIDEVEELCRARALAAFHLDPEAWGVNVQPYSGSPANFAAYTGLLQPHERIMGLDLPS 84
Query: 281 GGHLTHGFFTA-NKKISATSIFCESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSC 457
GGHLTHG++TA KKISATSI+ ES+PYKV TG +DYDKL E A F+P++II G S
Sbjct: 85 GGHLTHGYYTAGGKKISATSIYFESLPYKVSSETGYVDYDKLEEKAMDFRPKLIICGGSA 144
Query: 458 YSRCLDY*RFRQIADENGAYLMADMAHV 541
Y R DY RFR IAD+ GA L+ DMAH+
Sbjct: 145 YPRDWDYARFRAIADKCGAMLLCDMAHI 172
Score = 35.5 bits (78), Expect = 0.028
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 28 LQCLSSCLHNKYSEGMPYQRYYG 96
++ L S L NKYSEGMP RYYG
Sbjct: 1 MEALGSPLTNKYSEGMPGSRYYG 23
>03_05_1066 +
30098780-30098866,30099139-30099225,30099318-30099439,
30099580-30099656,30100135-30100259,30100497-30100589,
30100840-30100932,30101016-30101213,30101337-30101441,
30101535-30101600,30101808-30101885,30102144-30102233,
30102325-30102448,30102590-30102741
Length = 498
Score = 195 bits (476), Expect = 2e-50
Identities = 86/147 (58%), Positives = 115/147 (78%)
Frame = +2
Query: 101 NEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGTIMGLDLPD 280
NE+ID E L Q R+LE ++L+P +WGVNVQP SGSPANF VYT +++PH IM LDLP
Sbjct: 98 NEYIDMAESLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPH 157
Query: 281 GGHLTHGFFTANKKISATSIFCESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCY 460
GGHL+HG+ T KKISA SIF E+MPY++D +TGLIDYD++ ++A LF+P++I+AG S Y
Sbjct: 158 GGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGLIDYDQMEKSAVLFRPKLIVAGASAY 217
Query: 461 SRCLDY*RFRQIADENGAYLMADMAHV 541
+R DY R R++ D+ A L+ADMAH+
Sbjct: 218 ARLYDYDRMRKVCDKQKAILLADMAHI 244
Score = 47.6 bits (108), Expect = 6e-06
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +1
Query: 1 SENFTSVPVLQCLSSCLHNKYSEGMPYQRYYG 96
SENFTSV V+Q + S + NKYSEG P RYYG
Sbjct: 65 SENFTSVSVMQAVGSVMTNKYSEGYPGARYYG 96
>11_04_0205 +
14860857-14861534,14862585-14862975,14863069-14863170,
14863438-14863682
Length = 471
Score = 189 bits (460), Expect = 1e-48
Identities = 88/148 (59%), Positives = 110/148 (74%), Gaps = 1/148 (0%)
Frame = +2
Query: 101 NEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGTIMGLDLPD 280
N+ IDEIE L ++R+L ++L+ WGVNVQPYSGSPA FA YT ++ PH IMGLDLP
Sbjct: 72 NDVIDEIENLCRDRALAAFRLDAASWGVNVQPYSGSPATFAAYTALLNPHDRIMGLDLPS 131
Query: 281 GGHLTHGFFTA-NKKISATSIFCESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSC 457
GGHLTHG++TA KKISATSI+ ES+PYKV TG IDY+KL E A F+P++II G S
Sbjct: 132 GGHLTHGYYTAGGKKISATSIYFESLPYKVSAATGYIDYEKLEEKALDFRPKLIICGGSA 191
Query: 458 YSRCLDY*RFRQIADENGAYLMADMAHV 541
Y R DY + R +AD+ GA L+ DMAH+
Sbjct: 192 YPRDWDYAKLRAVADKVGALLLCDMAHI 219
Score = 49.2 bits (112), Expect = 2e-06
Identities = 22/32 (68%), Positives = 24/32 (75%)
Frame = +1
Query: 1 SENFTSVPVLQCLSSCLHNKYSEGMPYQRYYG 96
SENFTS V++ L S L NKYSEGMP RYYG
Sbjct: 39 SENFTSFAVMEALGSALTNKYSEGMPGARYYG 70
>05_04_0394 -
20906923-20907146,20907251-20907340,20908380-20908785,
20909264-20910247
Length = 567
Score = 167 bits (407), Expect = 4e-42
Identities = 79/148 (53%), Positives = 105/148 (70%), Gaps = 1/148 (0%)
Frame = +2
Query: 101 NEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGTIMGLDLPD 280
N+ ID IE L +R+L + L+P WGVNVQPYS + ANFAVYTG++ P+ IMGLD P
Sbjct: 174 NQHIDAIERLCCDRALAAFGLDPSRWGVNVQPYSCTSANFAVYTGLLLPNDRIMGLDSPS 233
Query: 281 GGHLTHGFFT-ANKKISATSIFCESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSC 457
GGH++HG++T + KK+S SIF E++ Y+V+P TG IDYDK+ E A F P+++I G S
Sbjct: 234 GGHVSHGYYTPSGKKVSGASIFFENLSYRVNPHTGYIDYDKVEEKAVDFHPKILICGASS 293
Query: 458 YSRCLDY*RFRQIADENGAYLMADMAHV 541
Y R DY R R +AD+ GA LM DMA +
Sbjct: 294 YPRDWDYARMRLVADKCGAVLMCDMAQI 321
Score = 38.3 bits (85), Expect = 0.004
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +1
Query: 1 SENFTSVPVLQCLSSCLHNKYSEGMPYQRYY 93
SEN+ VL L S L NKYSEG+P RYY
Sbjct: 141 SENYACRAVLDALGSHLTNKYSEGLPGARYY 171
>01_06_1521 +
37956131-37957204,37958560-37958962,37959370-37959471,
37959569-37959792
Length = 600
Score = 166 bits (403), Expect = 1e-41
Identities = 81/148 (54%), Positives = 103/148 (69%), Gaps = 1/148 (0%)
Frame = +2
Query: 101 NEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGTIMGLDLPD 280
N+ ID IE L R+L + L+P WGVNVQPYS + AN AVYTG++ P IMGL+ P
Sbjct: 204 NQHIDGIERLCHERALAAFGLDPACWGVNVQPYSCTSANLAVYTGLLLPKDRIMGLEPPS 263
Query: 281 GGHLTHGFFT-ANKKISATSIFCESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSC 457
GGH++HG++T + KK+S SIF ES+ YKV+P TG IDYDKL E A F P+++I G S
Sbjct: 264 GGHVSHGYYTPSGKKVSGASIFFESLSYKVNPQTGYIDYDKLEERAMDFHPKILICGGSS 323
Query: 458 YSRCLDY*RFRQIADENGAYLMADMAHV 541
Y R D+ R R IAD+ GA LM DMAH+
Sbjct: 324 YPREWDFARMRLIADKCGAVLMCDMAHI 351
Score = 41.1 bits (92), Expect = 6e-04
Identities = 20/32 (62%), Positives = 21/32 (65%)
Frame = +1
Query: 1 SENFTSVPVLQCLSSCLHNKYSEGMPYQRYYG 96
SENF VL+ L S L NKYSEG P RYYG
Sbjct: 171 SENFVCRAVLEALGSHLTNKYSEGHPGARYYG 202
>12_01_0818 + 7524549-7524747,7524855-7525863,7525964-7526108,
7526206-7526295,7526404-7526553,7527333-7528094,
7528177-7528496,7528581-7528707,7528792-7528959,
7529054-7530466,7530563-7530823,7530983-7531144,
7531976-7532121,7532601-7532667,7533483-7533587
Length = 1707
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 254 TIMGLDLPDGGHLTHGFFTANKKISATSIFCE-SMPYKVDPTTG 382
T GL+LP GGH++ + T + K+S+ S+F E M Y V+P TG
Sbjct: 1608 TTTGLELPSGGHVSCRYCTPSGKLSSASVFIEMEMSYMVNPQTG 1651
>01_05_0572 + 23356737-23357705,23357811-23357957,23358048-23358443
Length = 503
Score = 28.7 bits (61), Expect = 3.2
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 99 EMNSLMK*KYWHKIGHWKHTS*ILKNGE*MFNLIQGRQQTLLFIRVLLNRMVQLWD*IYL 278
E N + K+W ++GH + +K + +F+ +G L FI+ +L R Q+ D +
Sbjct: 377 ESNGELNSKFWQEVGHIECVESSIK--KVVFDQFRGGANELEFIKFILER-AQMLDKMVF 433
Query: 279 MVD 287
+VD
Sbjct: 434 VVD 436
>07_03_1784 -
29492511-29492804,29492913-29492999,29493076-29493222,
29493522-29493690,29493777-29494015,29494111-29494356,
29494419-29495084
Length = 615
Score = 27.9 bits (59), Expect = 5.5
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = -2
Query: 302 IHGSNVHHQVNLIP*LYHAVQQHPYKQQSLLATLNKVEHLLPILQDLACMFPVTYFVPIF 123
+HG + V+L+ L +++QH ++ + +HL P LQD A + F I
Sbjct: 174 LHGRTLTTPVSLLKCLL-SIKQHAFEASPYPVIITLEDHLTPDLQDKAAKMVLEVFGDIL 232
Query: 122 LF 117
+
Sbjct: 233 YY 234
>01_06_1668 +
38998348-38998434,38999234-38999300,38999377-38999435,
38999636-38999711,38999856-38999930,39000007-39000094,
39000261-39000486,39000689-39000804,39001172-39001383,
39001882-39001916,39002005-39002107,39002645-39002753,
39002838-39003036
Length = 483
Score = 27.5 bits (58), Expect = 7.3
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Frame = +2
Query: 47 VFTINTQRVCH-IKGTMA---RNEFIDEIEILAQ------NRSLETYKLNPEEWGVNVQP 196
VFT N +R+ G +A + + ++IE++A S+ ++ P+ G NV
Sbjct: 46 VFTENKERILDGSSGEVAVDHYHRYKEDIELMASLGFRAYRFSISWPRIFPDGLGKNVNE 105
Query: 197 ----YSGSPANFAVYTGVVEPHGTIMGLDLPDGGHLTHGFFTANKKISATSIFCES 352
+ NF + G+ EP+ T+ DLP T G + ++K + +++ E+
Sbjct: 106 QGVAFYNDLINFMIEKGI-EPYATLYHWDLPHNLQQTVGGWLSDKIVEYFALYAEA 160
>03_05_0209 + 22014556-22015308
Length = 250
Score = 27.1 bits (57), Expect = 9.7
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 47 HELKHCNTGTDVKFS 3
H+LKHCN G+D + +
Sbjct: 6 HDLKHCNPGSDARIT 20
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,572,218
Number of Sequences: 37544
Number of extensions: 295875
Number of successful extensions: 674
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 670
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1210221432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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