Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_O01
(543 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effec... 230 6e-61
U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effec... 230 6e-61
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical pr... 27 8.7
AL132862-25|CAB60566.2| 60|Caenorhabditis elegans Hypothetical... 27 8.7
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 27 8.7
>U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effect
lethal protein32, isoform a protein.
Length = 484
Score = 230 bits (562), Expect = 6e-61
Identities = 103/147 (70%), Positives = 125/147 (85%)
Frame = +2
Query: 101 NEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGTIMGLDLPD 280
NEFID++E+L Q R+LE + L+P +WGVNVQP SGSPANFAVYT +V +G IMGLDLPD
Sbjct: 89 NEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPD 148
Query: 281 GGHLTHGFFTANKKISATSIFCESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCY 460
GGHLTHGFFT +K+SATS F +S+PYKVDPTTGLIDYDKL + A LF+P+ IIAG+SCY
Sbjct: 149 GGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCY 208
Query: 461 SRCLDY*RFRQIADENGAYLMADMAHV 541
+R LDY RFR+IA + GAYLM+DMAH+
Sbjct: 209 ARHLDYERFRKIATKAGAYLMSDMAHI 235
Score = 44.4 bits (100), Expect = 5e-05
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +1
Query: 1 SENFTSVPVLQCLSSCLHNKYSEGMPYQRYYG 96
SENFTS V+ L S + NKYSEG P RYYG
Sbjct: 56 SENFTSKAVMDALGSAMCNKYSEGYPGARYYG 87
>U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effect
lethal protein32, isoform b protein.
Length = 507
Score = 230 bits (562), Expect = 6e-61
Identities = 103/147 (70%), Positives = 125/147 (85%)
Frame = +2
Query: 101 NEFIDEIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVEPHGTIMGLDLPD 280
NEFID++E+L Q R+LE + L+P +WGVNVQP SGSPANFAVYT +V +G IMGLDLPD
Sbjct: 112 NEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSNGRIMGLDLPD 171
Query: 281 GGHLTHGFFTANKKISATSIFCESMPYKVDPTTGLIDYDKLAETAKLFKPRVIIAGMSCY 460
GGHLTHGFFT +K+SATS F +S+PYKVDPTTGLIDYDKL + A LF+P+ IIAG+SCY
Sbjct: 172 GGHLTHGFFTPARKVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCY 231
Query: 461 SRCLDY*RFRQIADENGAYLMADMAHV 541
+R LDY RFR+IA + GAYLM+DMAH+
Sbjct: 232 ARHLDYERFRKIATKAGAYLMSDMAHI 258
Score = 44.4 bits (100), Expect = 5e-05
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = +1
Query: 1 SENFTSVPVLQCLSSCLHNKYSEGMPYQRYYG 96
SENFTS V+ L S + NKYSEG P RYYG
Sbjct: 79 SENFTSKAVMDALGSAMCNKYSEGYPGARYYG 110
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 40.7 bits (91), Expect = 7e-04
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +2
Query: 71 VCHIKGTMARNEFID--EIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVE 244
+ KG + R+E + EI +AQNR + ++++ EEW ++ +G PA + ++ +
Sbjct: 2444 IIEYKGEIIRSEVCEVREIRYVAQNRGVYMFRID-EEWVIDAT-MAGGPARYINHS--CD 2499
Query: 245 PHGTIMGLDLPDGGHLTHGFFTANKKISATSIFCESMPYKVDPTTGLI 388
P+ + LD G TAN+ ISA ++++ TT I
Sbjct: 2500 PNCSTQILDAGSGAREKKIIITANRPISANEELTYDYQFELEGTTDKI 2547
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 40.7 bits (91), Expect = 7e-04
Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Frame = +2
Query: 71 VCHIKGTMARNEFID--EIEILAQNRSLETYKLNPEEWGVNVQPYSGSPANFAVYTGVVE 244
+ KG + R+E + EI +AQNR + ++++ EEW ++ +G PA + ++ +
Sbjct: 2444 IIEYKGEIIRSEVCEVREIRYVAQNRGVYMFRID-EEWVIDAT-MAGGPARYINHS--CD 2499
Query: 245 PHGTIMGLDLPDGGHLTHGFFTANKKISATSIFCESMPYKVDPTTGLI 388
P+ + LD G TAN+ ISA ++++ TT I
Sbjct: 2500 PNCSTQILDAGSGAREKKIIITANRPISANEELTYDYQFELEGTTDKI 2547
>Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical
protein F09B9.1 protein.
Length = 710
Score = 27.1 bits (57), Expect = 8.7
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 327 DIFLFAVKNPWVKCPP 280
+ F A + PWV+CPP
Sbjct: 477 NFFTIAYEKPWVRCPP 492
>AL132862-25|CAB60566.2| 60|Caenorhabditis elegans Hypothetical
protein Y73F8A.32 protein.
Length = 60
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1
Query: 174 SSGFSLYVSSDLFC 133
SSGFSLYV S LFC
Sbjct: 42 SSGFSLYVFSVLFC 55
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 27.1 bits (57), Expect = 8.7
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 342 NIDVADIFLFAVKNPWVKCPP 280
N D F A PW++CPP
Sbjct: 461 NGDQTKFFNIAYSKPWIRCPP 481
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,789,039
Number of Sequences: 27780
Number of extensions: 273247
Number of successful extensions: 623
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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