Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_N19
         (535 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_01_0051 - 862286-864670                                             27   7.2  
01_06_0669 - 31063722-31063856,31064001-31064090,31064275-310643...    27   9.5  

>09_01_0051 - 862286-864670
          Length = 794

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 462 IVLDSLHEDIFVCGLCK 512
           +VLDS  + I +CGLCK
Sbjct: 413 LVLDSTTQTIMICGLCK 429


>01_06_0669 -
           31063722-31063856,31064001-31064090,31064275-31064356,
           31064448-31064494,31065074-31065130,31065368-31065433,
           31065537-31065558,31065641-31065753,31065903-31065974,
           31066839-31066961,31067052-31067141,31067504-31067545,
           31067791-31067878,31069167-31069286,31069382-31069434
          Length = 399

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = +3

Query: 309 ENIFYLYDIHTNCLNTNCHYRSRRTKKITN*YFVYTIISSKSVILYIMAHV 461
           E +F++ D+H   L       S+ T+     Y    I SSK+ I ++ +HV
Sbjct: 91  ETLFFIVDLHAITLPYEAPQLSKATRSTAAIYLACGIDSSKASI-FVQSHV 140


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,332,896
Number of Sequences: 37544
Number of extensions: 186927
Number of successful extensions: 298
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 293
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 298
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1190246000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)