Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_N12
(410 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|ch... 25 3.5
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 25 3.5
SPAC22A12.11 |dak1||dihydroxyacetone kinase Dak1|Schizosaccharom... 25 4.6
SPCC1020.10 |oca2||serine/threonine protein kinase Oca2 |Schizos... 25 6.1
SPBC3H7.06c |pof9||F-box protein Paf9|Schizosaccharomyces pombe|... 25 6.1
SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated |Schizosac... 25 6.1
SPBC609.03 |||WD repeat protein, human IQWD1 family|Schizosaccha... 24 8.0
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 24 8.0
SPAC22F8.12c |shf1||small histone ubiquitination factor Shf1|Sch... 24 8.0
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 24 8.0
SPBC1683.04 |||glycosyl hydrolase family 3|Schizosaccharomyces p... 24 8.0
>SPBC530.05 |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 25.4 bits (53), Expect = 3.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 284 FINRNDYSLDGKLNLFKSPDTSVD 355
F N Y G N FK PD S+D
Sbjct: 206 FTRENFYQKFGSPNCFKKPDGSID 229
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 25.4 bits (53), Expect = 3.5
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +2
Query: 245 DQIGASATAAHTDFINRNDYSLDGKLNLFK-SPDTSVDFNAGFKKFD 382
+Q+G + + DF N+ Y L NL D ++D N K+ D
Sbjct: 226 EQLGLNHSEPSVDFNNQTSYRLPNLTNLSSLIRDDTIDENGNAKEHD 272
>SPAC22A12.11 |dak1||dihydroxyacetone kinase
Dak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 580
Score = 25.0 bits (52), Expect = 4.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 23 AGVALDNVNGHGVSLTDTHIPG 88
A A+DN+ G SL H+PG
Sbjct: 178 AKAAIDNLVSIGASLAHVHVPG 199
>SPCC1020.10 |oca2||serine/threonine protein kinase Oca2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 24.6 bits (51), Expect = 6.1
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +1
Query: 118 SESLPQRXPRHHSEGFRHQKYARYRSCTQLQ 210
S SL P HH + +H K+ ++ S L+
Sbjct: 234 SLSLKSLVPNHHDKHDKHDKHEKHHSSLDLR 264
>SPBC3H7.06c |pof9||F-box protein Paf9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 467
Score = 24.6 bits (51), Expect = 6.1
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -2
Query: 145 VVIVVEEIHFAGSCHLVSEPG 83
+V + +IHF+G+C+ V+ G
Sbjct: 397 IVSIPHQIHFSGTCYSVAAGG 417
>SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 24.6 bits (51), Expect = 6.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 272 AHTDFINRNDYSLDGKLNLFKSPDTSVDFNAGFKKFDTPFMKS 400
+H +F + ND+S KLN S + +K+ PF K+
Sbjct: 158 SHDNFSDSNDFSFQKKLNTEDSNTSKTSTLDMYKEKLKPFTKT 200
>SPBC609.03 |||WD repeat protein, human IQWD1
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 24.2 bits (50), Expect = 8.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 275 HTDFINRNDYSLDGKLNLFKSPDT 346
HT +N D+S DG+ L S DT
Sbjct: 44 HTGCVNTLDWSADGEFLLSGSDDT 67
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 24.2 bits (50), Expect = 8.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 169 GESLRCDVVVIVVEEIHF 116
G+S RCD ++ EE+HF
Sbjct: 174 GQSGRCDGYILEGEELHF 191
>SPAC22F8.12c |shf1||small histone ubiquitination factor
Shf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 165
Score = 24.2 bits (50), Expect = 8.0
Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = +2
Query: 293 RNDYSLDGKLNLFKSP-DTSVDFNAGFK 373
RNDY DG + ++SP ++VD N+ ++
Sbjct: 5 RNDYHYDGNDHQYRSPLKSNVDQNSFYE 32
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 24.2 bits (50), Expect = 8.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 169 GESLRCDVVVIVVEEIHF 116
G+S RCD ++ EE+HF
Sbjct: 174 GQSGRCDGYILEGEELHF 191
>SPBC1683.04 |||glycosyl hydrolase family 3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 832
Score = 24.2 bits (50), Expect = 8.0
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 403 GGLHE-GCIELLEAGVEIDRGVRTLEEVQLSVQGVIVTID 287
GG + GC+++++ EID VR + V + V +T +
Sbjct: 535 GGRYSIGCVKVIDPETEIDYAVRVAKSVDCVILCVGLTAE 574
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,708,483
Number of Sequences: 5004
Number of extensions: 34237
Number of successful extensions: 117
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 142254980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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