Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_N06
(567 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr... 30 0.21
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 29 0.48
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 28 0.83
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 28 1.1
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 27 1.9
SPBC947.08c |||histone promoter control protein Hpc2 |Schizosacc... 27 2.5
SPBC713.03 |||D-lactate dehydrogenase |Schizosaccharomyces pombe... 27 2.5
SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2 |Schizo... 27 2.5
SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1 |Schizosacch... 26 3.4
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 26 3.4
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 26 4.4
SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyc... 25 5.9
SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 25 5.9
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 5.9
SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces pom... 25 5.9
SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces... 25 7.7
>SPBC530.02 |||membrane transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 541
Score = 30.3 bits (65), Expect = 0.21
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +1
Query: 28 TFIRYSTKFMVKRRLRNTPWPSSRKEPRTPRSMIYEA 138
T + Y +++ + + RN W + + R PRS IY+A
Sbjct: 283 TILDYKARYL-RNKTRNMKWHTIHERQRNPRSAIYQA 318
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 29.1 bits (62), Expect = 0.48
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -1
Query: 510 WLCYMWHSWRTSPVLRRRGSGRAVRTGSRRSWISRHLKRKRHLPY 376
W+ Y+WH + G G+ V+T + S+++ L ++H P+
Sbjct: 385 WMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSL--RQHGPF 427
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 28.3 bits (60), Expect = 0.83
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 261 GSCIPGVDXPENNP---NGVDVSKLKKQCSSDNSPWKCLQEDRGDVAFVSSADLSNFDES 431
GS + G + N+P NG V+ KQ + N+ ++C D+ D+ FV + L+N +
Sbjct: 105 GSELKGEES-HNSPGTLNGTSVANASKQPNMPNATFRC---DKCDMMFVKQSGLTNHKRT 160
Query: 432 QYE 440
++
Sbjct: 161 YHQ 163
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = -1
Query: 510 WLCYMWHSWRTSPVLRRRGSGRAVRTGSRRSWISRHLKRKRHLPY 376
W+ Y+WH + G G+ V+T S++ L K+H P+
Sbjct: 400 WMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSL--KQHGPF 442
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +3
Query: 333 QCSSDNSPWKCLQEDRGDVAFVSSADLSNFDESQYEQLCLN 455
+C + + WKC+Q G +V S ++ D + + CL+
Sbjct: 123 KCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLD 163
>SPBC947.08c |||histone promoter control protein Hpc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 338
Score = 26.6 bits (56), Expect = 2.5
Identities = 24/85 (28%), Positives = 38/85 (44%)
Frame = +1
Query: 61 KRRLRNTPWPSSRKEPRTPRSMIYEAKDPAITPSGRSAVFTHLSTTLSIKKPSTPVNASK 240
KR P S+KE +T +S + K T S T +T ++K TP+ ++
Sbjct: 198 KRENAKVPKDVSKKEAKTTKS---KEKATKKTSSSVPKQSTGENTKKAVKL-ETPLTSTP 253
Query: 241 TWPISSEGLAYPASXNQKIIPTALM 315
P SE PA+ N+ I P + +
Sbjct: 254 PIPPLSEPKHSPATVNEHISPPSAL 278
>SPBC713.03 |||D-lactate dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 26.6 bits (56), Expect = 2.5
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2
Query: 281 DAGYARPSEEIGQVFDAFTGVDGFFID 201
D YA+ SE+ QVF + G DG ID
Sbjct: 45 DPKYAKLSEQDVQVFKSIIGKDGSLID 71
>SPBP19A11.06 |lid2|SPBP4H10.01|Lid2 complex subunit Lid2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1513
Score = 26.6 bits (56), Expect = 2.5
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = -3
Query: 445 SCSYWLS-SKLDKSALETKATSPLSSCKHFHGLLSLEHCFFSFDTSTPLG-LFSGXSTPG 272
S Y L+ SK DK+A+ T + EH +F D TPLG + + S
Sbjct: 1438 SSGYTLNNSKFDKAAVSK--TLSAQDVSRLQKVSCGEHLYFGTDVFTPLGDMATSASMFS 1495
Query: 271 MQDPPKKSAKF 239
+ D +K+ F
Sbjct: 1496 LDDSSEKTDAF 1506
>SPAC22E12.04 |ccs1|pccs, pccs|metallochaperone Ccs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 297
Score = 26.2 bits (55), Expect = 3.4
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 258 GGSCIPGVDX-PENNPNGVDVSKLKKQCSSDNSPWKCLQEDRG 383
G SC D P P+ S+ KK C S P C QE +G
Sbjct: 222 GSSCCSKKDSSPSEKPSCC--SQEKKSCCSSKKPSCCSQEKKG 262
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 26.2 bits (55), Expect = 3.4
Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +1
Query: 79 TPWPSSRKEPRTPRSMIYEAKDPA-ITPSGRSAVFTHLSTTLSIKKPSTPVNASKTWPIS 255
+P S+R+ + RS + + I+PS SA HLS + S+ + + +
Sbjct: 514 SPTESTRQSLDSRRSFEHSTSSSSGISPSHSSASLAHLSQASNPNGSSSAPHRPTSARVG 573
Query: 256 SEGLAYPASXNQKIIPTALMYRN 324
S A A +++P+ RN
Sbjct: 574 SHRNALDALRRARMLPSGFSRRN 596
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 25.8 bits (54), Expect = 4.4
Identities = 20/84 (23%), Positives = 38/84 (45%)
Frame = +1
Query: 55 MVKRRLRNTPWPSSRKEPRTPRSMIYEAKDPAITPSGRSAVFTHLSTTLSIKKPSTPVNA 234
+ ++R R + SS + ++ E + A PS + + S +I KP P +
Sbjct: 201 LARKRSRLNSFNSSTSTSGSSSNVAAEVSNDASQPSNQDS-----SLNSNIVKPPLPPSN 255
Query: 235 SKTWPISSEGLAYPASXNQKIIPT 306
++ SSE + P + Q+ +PT
Sbjct: 256 VQSNSSSSENVPKPNAETQEDLPT 279
>SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 898
Score = 25.4 bits (53), Expect = 5.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = -3
Query: 352 LLSLEHCFFSFDTSTPLGLFSGXSTPGMQDPPKKSAKFLTHSPVLMA 212
LL+L C F F PL T ++D P +S + S VL++
Sbjct: 228 LLALGWCLFLFIAIKPLVYLLAVKTRSLKDKPSESFICIVLSMVLVS 274
>SPAC29A4.19c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1096
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 176 TAERPEGVMAGSFAS*IIDLGVRGSFLDDGHGVFRSLLFTINFVE 42
T+ RP + G + DLG++ + HG+ +L +N+VE
Sbjct: 948 TSNRPNSTLFGKGR--VKDLGIQSVLIWLSHGLLTLILHELNWVE 990
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 5.9
Identities = 22/96 (22%), Positives = 35/96 (36%)
Frame = +1
Query: 22 STTFIRYSTKFMVKRRLRNTPWPSSRKEPRTPRSMIYEAKDPAITPSGRSAVFTHLSTTL 201
S T Y+T + + PSS + S + +T S AV + S T
Sbjct: 854 SVTSTAYTTDSVTSTTALTSQGPSSSVVSSSLSSTTSLSTSIPVTSSVAPAVTSTGSETS 913
Query: 202 SIKKPSTPVNASKTWPISSEGLAYPASXNQKIIPTA 309
S+ T S +W + A +S + PT+
Sbjct: 914 SVVGSGTDSATSSSWTAETSSSAITSSVAASVTPTS 949
>SPBC19G7.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 687
Score = 25.4 bits (53), Expect = 5.9
Identities = 9/35 (25%), Positives = 23/35 (65%), Gaps = 6/35 (17%)
Frame = +3
Query: 291 ENNPNGVDVSK------LKKQCSSDNSPWKCLQED 377
++NPN ++++K ++ +CS++ + WK Q++
Sbjct: 28 KDNPNNINIAKNLLNNNIQARCSTNEASWKLAQKE 62
>SPBC23G7.06c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 745
Score = 25.0 bits (52), Expect = 7.7
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = -3
Query: 565 IETSERKSLADNQVLDGDMAMLHVA*LENESRPPASRFRQSCSYWLSSKLDK-SALETKA 389
+ETSE +N VL + L +EN S P + ++ D AL+TKA
Sbjct: 486 VETSELSDSDENSVLSNKSSTLSKKVVENTS--PLKYTHSASKSFIGEVQDSLQALKTKA 543
Query: 388 TSPLS 374
P S
Sbjct: 544 HKPRS 548
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,559,948
Number of Sequences: 5004
Number of extensions: 56172
Number of successful extensions: 204
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 204
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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