Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_N06
(567 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003130-9|AAP68939.1| 307|Caenorhabditis elegans Hypothetical ... 33 0.19
AF047655-12|AAD34650.2| 171|Caenorhabditis elegans Hypothetical... 30 1.3
AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical ... 30 1.3
AF002198-1|AAF99929.1| 201|Caenorhabditis elegans Hypothetical ... 30 1.3
Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical pr... 29 1.8
U80029-9|AAB37588.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.8
U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical pr... 28 5.4
U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical pr... 28 5.4
U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z29561-5|CAA82668.1| 395|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 27 9.4
U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein. 27 9.4
U53155-2|AAC48266.2| 918|Caenorhabditis elegans Valyl trna synt... 27 9.4
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 27 9.4
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 27 9.4
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 27 9.4
AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain fa... 27 9.4
>AF003130-9|AAP68939.1| 307|Caenorhabditis elegans Hypothetical
protein F55A12.2c protein.
Length = 307
Score = 32.7 bits (71), Expect = 0.19
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 118 RSMIYEAKDPAITPSGRSAVFTHLSTTLSIKKPSTPVNASKTWPISSE 261
R ++ A+D + PS RS ++ +LS+ S + S TWP E
Sbjct: 32 RGLVAAARDASTDPSNRSTLWQNLSSMSSADQAHLMSRLSSTWPFRDE 79
>AF047655-12|AAD34650.2| 171|Caenorhabditis elegans Hypothetical
protein C17B7.12 protein.
Length = 171
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 330 KQCSSDNSPWKCLQEDRGDVAFVSSADLSNF 422
K CS+ KC++ED F S D+ NF
Sbjct: 119 KDCSNYEENVKCIEEDLAKTRFCSQPDIENF 149
>AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical
protein T05E7.3 protein.
Length = 997
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 475 SRPPASRFRQSCSYWLSSKLDKSALETKATSPLSSCKHFHGLLSLE 338
+ P ASRF +S W K+ K+ L + FH L S+E
Sbjct: 737 TNPKASRFSESSLSWKDVKMSKTVLSFDVFDRIEKIVPFHILTSIE 782
>AF002198-1|AAF99929.1| 201|Caenorhabditis elegans Hypothetical
protein F35F10.5 protein.
Length = 201
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 330 KQCSSDNSPWKCLQEDRGDVAFVSSADLSNF 422
K CS+ KC++ED F S D+ NF
Sbjct: 118 KDCSNYEENVKCIEEDLAKTRFCSQPDIENF 148
>Z68134-4|CAA92224.1| 567|Caenorhabditis elegans Hypothetical
protein T27A8.5 protein.
Length = 567
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 184 HLSTTLSIKKPSTPVNASKTWPIS 255
HLST LSI P N +K WP+S
Sbjct: 101 HLSTLLSIDGVHIPGNNNKLWPVS 124
>U80029-9|AAB37588.1| 459|Caenorhabditis elegans Hypothetical
protein T20D4.9 protein.
Length = 459
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Frame = +3
Query: 120 IDDLRGKRSCHNSFGTFSGLHAPLYYLINKKAINTGECVKNLADFFGGSCIPGVD----X 287
ID K+ H GL + + KK++N + L GG CI G
Sbjct: 320 IDGWFSKKVTHEDLANIMGLRMVMK-MAAKKSVNEEQLKNALETILGGLCIQGKPKNSIL 378
Query: 288 PENNPNGVDVSKLKKQCSSDNSPWKCLQEDR 380
P ++P + ++ +Q +S + C DR
Sbjct: 379 PHHHPFEISINTAVRQYPLFSSLYGCRPGDR 409
>U42436-3|AAL02471.1| 498|Caenorhabditis elegans Hypothetical
protein C49H3.6b protein.
Length = 498
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 88 PSSRKEPRTPRSMIYEAKDPAIT-PSGRSAVFTHLSTTLSIKKP-STPVNASKTWPISSE 261
P+S P T +S + A PA+T P R ++ + +++ ++ + S+PV + +SS
Sbjct: 366 PNSATFP-TEKSRLPRAPPPAVTTPVPRMSIGSLPASSSNVPRTMSSPVKKTPVMGVSST 424
Query: 262 GLAYPASXNQKIIPTALMYRN 324
+ P S +PT + N
Sbjct: 425 AVRRPQSAATTTMPTTSVITN 445
>U42436-2|AAL02470.2| 552|Caenorhabditis elegans Hypothetical
protein C49H3.6a protein.
Length = 552
Score = 27.9 bits (59), Expect = 5.4
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 88 PSSRKEPRTPRSMIYEAKDPAIT-PSGRSAVFTHLSTTLSIKKP-STPVNASKTWPISSE 261
P+S P T +S + A PA+T P R ++ + +++ ++ + S+PV + +SS
Sbjct: 366 PNSATFP-TEKSRLPRAPPPAVTTPVPRMSIGSLPASSSNVPRTMSSPVKKTPVMGVSST 424
Query: 262 GLAYPASXNQKIIPTALMYRN 324
+ P S +PT + N
Sbjct: 425 AVRRPQSAATTTMPTTSVITN 445
>U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical
protein F52C9.5 protein.
Length = 618
Score = 27.9 bits (59), Expect = 5.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 412 KSALETKATSPLSSCKHFHGLLSLEHCFFSFDTSTPLG 299
K+ +E K CK F L S C F+ + + P+G
Sbjct: 288 KACIENKINGVALKCKSFDFLSSTSTCAFTSEAAVPVG 325
>Z29561-5|CAA82668.1| 395|Caenorhabditis elegans Hypothetical
protein R10E12.2 protein.
Length = 395
Score = 27.5 bits (58), Expect = 7.1
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -3
Query: 466 PASRFRQSCSYWLSSKLDKSALETKATSPLSSCKHFHG 353
P + ++ +YW++S +KS+ E+ TSPL S HG
Sbjct: 272 PWEQQQRPLTYWMTSS-NKSS-ESTMTSPLDSASSLHG 307
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 489 SWRTSPVLRRRGSGRAVRTGSRRSWIS 409
SW +LR G+G A T R W++
Sbjct: 823 SWLRQKILRTEGAGSANTTEKRNGWVN 849
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 489 SWRTSPVLRRRGSGRAVRTGSRRSWIS 409
SW +LR G+G A T R W++
Sbjct: 847 SWLRQKILRTEGAGSANTTEKRNGWVN 873
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 489 SWRTSPVLRRRGSGRAVRTGSRRSWIS 409
SW +LR G+G A T R W++
Sbjct: 833 SWLRQKILRTEGAGSANTTEKRNGWVN 859
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 489 SWRTSPVLRRRGSGRAVRTGSRRSWIS 409
SW +LR G+G A T R W++
Sbjct: 838 SWLRQKILRTEGAGSANTTEKRNGWVN 864
>U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein.
Length = 452
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 207 KKAINTGE--CVKNLADFFGGSCIPGVDXPENNPNGVDVSKLKKQCSSDNS 353
+K + TGE +KN + + C G+D P+ + + D SKL ++DN+
Sbjct: 151 EKRLQTGEEFQIKNNSLYCRSDC-RGLDNPDTSASVPDYSKLNNNNNNDNN 200
>U53155-2|AAC48266.2| 918|Caenorhabditis elegans Valyl trna
synthetase protein 1 protein.
Length = 918
Score = 27.1 bits (57), Expect = 9.4
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = -2
Query: 260 SEEIGQVFDAFTGVDGFFIDKVVERCVKTAERPEGV 153
S+ +G V D +DG +K++ER +A E +
Sbjct: 514 SKSLGNVIDPLDVLDGITFEKMIERVKSSAHEKEEI 549
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 489 SWRTSPVLRRRGSGRAVRTGSRRSWIS 409
SW +LR G+G A T R W++
Sbjct: 479 SWLRQKILRTEGAGSANTTEKRNGWVN 505
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 489 SWRTSPVLRRRGSGRAVRTGSRRSWIS 409
SW +LR G+G A T R W++
Sbjct: 543 SWLRQKILRTEGAGSANTTEKRNGWVN 569
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 27.1 bits (57), Expect = 9.4
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = -1
Query: 489 SWRTSPVLRRRGSGRAVRTGSRRSWIS 409
SW +LR G+G A T R W++
Sbjct: 838 SWLRQKILRTEGAGSANTTEKRNGWVN 864
>AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain
family protein 7 protein.
Length = 452
Score = 27.1 bits (57), Expect = 9.4
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +3
Query: 207 KKAINTGE--CVKNLADFFGGSCIPGVDXPENNPNGVDVSKLKKQCSSDNS 353
+K + TGE +KN + + C G+D P+ + + D SKL ++DN+
Sbjct: 151 EKRLQTGEEFQIKNNSLYCRSDC-RGLDNPDTSASVPDYSKLNNNNNNDNN 200
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,178,627
Number of Sequences: 27780
Number of extensions: 317991
Number of successful extensions: 1157
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1176726318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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