Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_N05
(573 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 251 5e-68
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 221 4e-59
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 195 3e-51
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 152 3e-38
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 139 2e-34
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 135 5e-33
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 131 8e-32
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 125 4e-30
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 118 5e-28
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 88 7e-19
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 88 7e-19
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 80 3e-16
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 73 3e-14
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 72 5e-14
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 72 7e-14
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 68 9e-13
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 63 3e-11
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 62 4e-11
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 60 2e-10
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 60 3e-10
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 57 2e-09
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 36 0.006
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 30 0.21
SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase Alg6|Schizosac... 29 0.64
SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase I|Schizosacchar... 28 1.1
SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces p... 27 1.5
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 27 2.0
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 27 2.0
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 26 3.4
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 4.5
SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 26 4.5
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 26 4.5
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 26 4.5
SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit... 25 6.0
SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid alpha... 25 6.0
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 7.9
SPAC30D11.06c |||DUF300 family protein|Schizosaccharomyces pombe... 25 7.9
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 25 7.9
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 251 bits (615), Expect = 5e-68
Identities = 116/179 (64%), Positives = 153/179 (85%), Gaps = 1/179 (0%)
Frame = +3
Query: 39 KTYDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIW 218
K+YDYL KLLLIGDSGVGK+ +L RFSED+F SFI+TIGIDFKIRTI+LDGK++KLQIW
Sbjct: 4 KSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIW 63
Query: 219 DTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNK 398
DTAGQERFRTITTAYYRG+MGI+L+YDVT++KSF+N++ W N+E++AS +V K+++GNK
Sbjct: 64 DTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNK 123
Query: 399 CDLDAKRLVSKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLARDI-KAKMENKQEAS 572
CD + +R VS E+G+ LA E +KF+E SAK ++NV+ AF+TLAR+I K K++ + E S
Sbjct: 124 CDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFS 182
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 221 bits (541), Expect = 4e-59
Identities = 103/180 (57%), Positives = 136/180 (75%)
Frame = +3
Query: 33 MAKTYDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 212
M YDYLFKLLLIGDSGVGK+ +L RF++D + S+ISTIG+DFKIRT +L+GK VKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQ 60
Query: 213 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILG 392
IWDTAGQERFRTIT++YYRG+ GI++VYDVT++ SF N+K W++ I+ A V ++++G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVG 120
Query: 393 NKCDLDAKRLVSKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMENKQEAS 572
NK D+ K++V ++ A I F+ETSAKDS NVE AF T++R IK +M N AS
Sbjct: 121 NKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFAS 180
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 195 bits (476), Expect = 3e-51
Identities = 88/172 (51%), Positives = 124/172 (72%)
Frame = +3
Query: 45 YDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDT 224
YDYLFK +LIGDSGVGK+++L RF+ + FNI STIG++F R I LD KK+K QIWDT
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 225 AGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCD 404
AGQER+R IT+AYYRG++G ++VYD+T + SF+N+ W++ + E+A +++ M++GNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTD 126
Query: 405 LDAKRLVSKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMENK 560
L R VS E + A E + F+ETSA D+ NVE AF T+ +I + N+
Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNR 178
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 152 bits (369), Expect = 3e-38
Identities = 76/172 (44%), Positives = 113/172 (65%)
Frame = +3
Query: 57 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 236
FKL+ +G+ VGKTS++ RF D F+ ++ +TIGIDF +T+ L+ + V+LQ+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 237 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDAK 416
RFR++ +Y R S ++VYD+TN SF N + WI ++ DV +++GNK DL K
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131
Query: 417 RLVSKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMENKQEAS 572
R V++E GE+ A E +I +ETSAK NV+ F +A+ + MEN + S
Sbjct: 132 RQVTQEEGEKKAKELKIMHMETSAKAGHNVKLLFRKIAQMLPG-MENVETQS 182
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 139 bits (337), Expect = 2e-34
Identities = 72/177 (40%), Positives = 108/177 (61%), Gaps = 5/177 (2%)
Frame = +3
Query: 39 KTYDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDL----DGKKVK 206
++YDYL K++L G SG GK+ +L RF ++ ++ T+GIDF R I + K++K
Sbjct: 4 ESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIK 63
Query: 207 LQIWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMI 386
LQIWDTAGQE+FR++ YYRG+ G +LVYDVTN+ SFE + +W+ +I A + + ++
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVVL 123
Query: 387 LGNKCDLDAKRLVSKERGEQLAVEYQIKFV-ETSAKDSLNVEYAFYTLARDIKAKME 554
G+K DL +R VS E + E I ETS+ NVE F ++ I ++E
Sbjct: 124 AGSKSDLQNQRQVSTEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRIE 180
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 135 bits (326), Expect = 5e-33
Identities = 74/186 (39%), Positives = 116/186 (62%), Gaps = 6/186 (3%)
Frame = +3
Query: 33 MAKTYDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 212
MA +L K++++G+SGVGKTSI+ ++ F+ + +TIG DF + + +D K V LQ
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQ 60
Query: 213 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEK---- 380
+WDTAGQERF+++ A+YRG+ +LVYDV N KSFE + +W AS +
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPF 120
Query: 381 MILGNKCDL-DAKRLVSKERGEQLA-VEYQIKFVETSAKDSLNVEYAFYTLARDIKAKME 554
++LGNK D+ + KR+VSK + +I + ETSAK+++NV+ AF T+A+ M+
Sbjct: 121 ILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMD 180
Query: 555 NKQEAS 572
+ A+
Sbjct: 181 SDDIAA 186
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 131 bits (316), Expect = 8e-32
Identities = 70/169 (41%), Positives = 102/169 (60%), Gaps = 2/169 (1%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLD-GKKVKLQIWDTAGQE 236
KL+L+GDS VGK+S++ RF +D F+ STIG F +T+ +D VKL+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 237 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDL-DA 413
R++++ YYR + ++VYD+T S E K+WI+ ++ A + + GNK DL
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 414 KRLVSKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMENK 560
+R V K E A E + F ETSAK + NV F +A+ K +E+K
Sbjct: 136 RRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAK--KLPLEDK 182
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 125 bits (302), Expect = 4e-30
Identities = 66/179 (36%), Positives = 106/179 (59%), Gaps = 1/179 (0%)
Frame = +3
Query: 33 MAKTYDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQ 212
M TY +KL+++GD GVGK+++ + + F + TI ++ + ++DG+ L
Sbjct: 1 MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLD 59
Query: 213 IWDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMIL- 389
+ DTAGQE + + Y R G +LVY++T+ SF+ I + + I D ++L
Sbjct: 60 VLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLV 119
Query: 390 GNKCDLDAKRLVSKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLARDIKAKMENKQE 566
NKCDL+A+R+VS+ GEQLA +VETSAK LNVE AFY+L R I+ +++++
Sbjct: 120 ANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRYNKSEEK 178
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 118 bits (285), Expect = 5e-28
Identities = 65/165 (39%), Positives = 103/165 (62%), Gaps = 7/165 (4%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 239
K++++GDSGVGKT ++ +F F+ + +TIG DF + + +D K V LQ+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 240 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD---VEKMILGNKCDLD 410
F+++ A+YRG+ ++VY+V N KSF++++NW + S D +I+GN+ D D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQIDKD 129
Query: 411 A-KRLVSKERG-EQLAVEYQIKFV--ETSAKDSLNVEYAFYTLAR 533
A KR VS R + ++ + E SAK++ NV F T++R
Sbjct: 130 ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSR 174
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 88.2 bits (209), Expect = 7e-19
Identities = 47/162 (29%), Positives = 90/162 (55%), Gaps = 1/162 (0%)
Frame = +3
Query: 57 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 236
FKL+L+GD G GKT+ + R F +I+T+G++ + ++ +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 237 RFRTITTAYY-RGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDA 413
+ + YY +G GI +++DVT+ +++N+ +W R++ ++ ++ GNK D+
Sbjct: 70 KLGGLRDGYYIQGQCGI-IMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVKE 127
Query: 414 KRLVSKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLARDI 539
+++ K + + +++ + SAK + N E F LAR +
Sbjct: 128 RKV--KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 167
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 88.2 bits (209), Expect = 7e-19
Identities = 51/162 (31%), Positives = 91/162 (56%), Gaps = 1/162 (0%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 239
++ ++G VGK+S+ ++ E+ F S+ TI F + I G++ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 240 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASAD-VEKMILGNKCDLDAK 416
+ + + + G G +LVY +T++ SFE +K I + + V +++GNK DL +
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 417 RLVSKERGEQLAVEYQIKFVETSAKDSLNVEYAFYTLARDIK 542
R V+ E G+ LA E++ + E SA+ + NV AF + +I+
Sbjct: 127 RAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEIE 168
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 79.8 bits (188), Expect = 3e-16
Identities = 52/168 (30%), Positives = 88/168 (52%), Gaps = 10/168 (5%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 239
K++++GD GKTS+L F++ F + TI ++ I I +DG ++L +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENY-IHDIFVDGNSIELSLWDTAGQEE 73
Query: 240 FRTITTAYYRGSMGIMLVYDVTNEKSFEN-IKNWIRNIEENASADVEKMILGNKCDL--- 407
+ + + Y + IM+ + V + S EN I W+ + N V+ +++ KCDL
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNCPG-VKLVLVALKCDLRGA 132
Query: 408 -----DAKRLVSKERGEQLAVEYQ-IKFVETSAKDSLNVEYAFYTLAR 533
D +++ E G A + ++++E SAK + V AF AR
Sbjct: 133 DEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTEAAR 180
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 72.9 bits (171), Expect = 3e-14
Identities = 49/172 (28%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 239
KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ ++L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHIELALWDTAGQED 66
Query: 240 FRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDL--D 410
+ + Y S +++ + V +S +N+ + WI + S ++ +++G K DL D
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCS-NLPILLVGCKVDLRND 125
Query: 411 AKRL----------VSKERGEQLAVEY-QIKFVETSAKDSLNVEYAFYTLAR 533
K + ++ E G+ +A + K++E SAK + V F T AR
Sbjct: 126 PKTIEELSKTSQKPITFEEGQVVAQKIGAYKYLECSAKLNEGVNEVFETAAR 177
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 72.1 bits (169), Expect = 5e-14
Identities = 41/168 (24%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Frame = +3
Query: 36 AKTYDYLFKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQI 215
A+ + K+ +IGDS +GKTS++ + + +F+ T+G++F +TI + ++ I
Sbjct: 4 ARKNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSI 63
Query: 216 WDTAGQERFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGN 395
WD GQ F + ++ I+ ++D++ + + +IK W R + +++G
Sbjct: 64 WDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQ-ARGFNKTAVPILIGT 122
Query: 396 KCD-------LDAKRLVSKERGEQLAVEYQIKFVETSAKDSLNVEYAF 518
K D D + + + R A++ + F TS S+NV+ F
Sbjct: 123 KYDHFMTFPREDQEEITKQARRYAKAMKASLVFCSTS--HSINVQKIF 168
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 71.7 bits (168), Expect = 7e-14
Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 14/185 (7%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 239
KL+++GD GKT +L FS+ F ++ T+ ++ + +++DG+ V+L +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENY-VADVEVDGRHVELALWDTAGQED 66
Query: 240 FRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDL--D 410
+ + Y S I++ + V + S +N+ + WI + S+ + +++ K DL D
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCSS-LPILLVACKADLRND 125
Query: 411 AKRL----------VSKERGEQLAVEY-QIKFVETSAKDSLNVEYAFYTLARDIKAKMEN 557
K + V+ E G+ +A + K++E SAK + V F + R K +
Sbjct: 126 PKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAMLKHKP 185
Query: 558 KQEAS 572
K + S
Sbjct: 186 KVKPS 190
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 68.1 bits (159), Expect = 9e-13
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 1/126 (0%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 239
KL+++GD GKTS+L F+ F ++ T+ ++ + +DGK V+L +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENY-VSDCRVDGKSVQLALWDTAGQEE 68
Query: 240 FRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKCDLDAK 416
+ + Y + I++ + + + S EN+ WI I +V +++G K DL +
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEI-NTLCPNVPFILVGMKADLRSD 127
Query: 417 RLVSKE 434
+ +E
Sbjct: 128 PVAIEE 133
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 62.9 bits (146), Expect = 3e-11
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 14/167 (8%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 239
K +++GD VGKT +L ++ + F ++ T+ ++ + T+ + + L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 240 FRTITTAYYRGSMGIMLVYDVTNEKSFENIK-NWIRNIEENASADVEKMILGNKCDL--- 407
+ + Y + ++ + VT+ SFEN+K W + + V +I+G + DL
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHCPG-VPCLIVGTQIDLRDD 122
Query: 408 ---------DAKRLVSKERGEQLAVEY-QIKFVETSAKDSLNVEYAF 518
+ ++ E+GE+LA E +K+VE SA ++ F
Sbjct: 123 PSVQQKLARQHQHPLTHEQGERLARELGAVKYVECSALTQKGLKNVF 169
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 62.5 bits (145), Expect = 4e-11
Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 14/167 (8%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIR-TIDLDGKKVKLQIWDTAGQE 236
KL+++GD G GKT +L FS F ++ T+ ++ T + K ++L +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 237 RFRTITTAYYRGSMGIMLVYDVTNEKSFENI-KNWIRNIEENASADVEKMILGNKCDLDA 413
+ + Y S I+L + + S N+ + W + ++ +++G K DL
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEV-QHFCPRTPIVLVGLKADLRK 134
Query: 414 KR------------LVSKERGEQLAVEYQIKFVETSAKDSLNVEYAF 518
R V+ ++ + +A+ +VE SAK++ V F
Sbjct: 135 DRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVF 181
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 60.1 bits (139), Expect = 2e-10
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSIL-FRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 236
++LL+G GKT+IL +ED +S T G F+IRT++++G ++ IWD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKCLLNEDVNEVS--PTFG--FQIRTLEVEG--LRFTIWDIGGQK 71
Query: 237 RFRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRN-IEENASADVEKMILGNKCDLDA 413
R Y+ + I+ V D ++ E +N ++ + E ++L NK D+
Sbjct: 72 TLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDVSG 131
Query: 414 KRLVSKERGEQLAV-EYQI---KFVETSAKDSLNVEYAFYTLARDIK 542
L S+E + L + +Y+ + SA LN++ A LA D+K
Sbjct: 132 -ALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISWLANDLK 177
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 59.7 bits (138), Expect = 3e-10
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 239
++L++G GKT+IL++ N S ++ + F + T+ K +K +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLK---LNQSVVTIPTVGFNVETVTY--KNIKFNVWDVGGQDK 77
Query: 240 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWI-RNIEENASADVEKMILGNKCDL 407
R + Y+ G+ G++ V D + + + R I + D ++L NK DL
Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 56.8 bits (131), Expect = 2e-09
Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 239
++L++G GKT+IL++ ++ I TIG F + T++ + + +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIG--FNVETVEY--RNISFTVWDVGGQDK 73
Query: 240 FRTITTAYYRGSMGIMLVYDVTN-EKSFENIKNWIRNIEENASADVEKMILGNKCDL 407
R + Y++ + GI+ V D + E+ E + R + E+ D ++ NK DL
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDL 130
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 35.5 bits (78), Expect = 0.006
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 5/159 (3%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQER 239
++++ GD GVGK+S++ ++ N++ I + I + V L + DT
Sbjct: 5 RVVICGDQGVGKSSLISALIQED-NVTSIPKVFPIISIPSNPDSNDDVSLVLVDTQSDSN 63
Query: 240 FRTITTAYYRGSMGIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKC-DLDAK 416
R A + + I LVY ++ S+E + + + +V ++ NK DLD
Sbjct: 64 EREYLAAEIKKANVICLVY--SDNYSYERVSIFWLPYFRSLGVNVPIVLCENKSEDLDNY 121
Query: 417 RLVSKERGEQLAVEYQIKFVET----SAKDSLNVEYAFY 521
+ + E + + + K +E SA + +NV FY
Sbjct: 122 QGLHTIEHEMIPLINEFKEIEACILCSALEKINVNELFY 160
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 30.3 bits (65), Expect = 0.21
Identities = 40/138 (28%), Positives = 60/138 (43%), Gaps = 12/138 (8%)
Frame = +3
Query: 60 KLLLIGDSGVGKTSIL-FRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 236
K+LL+G SG GK+S+ FS + ID + + G V L +WD GQE
Sbjct: 4 KVLLMGRSGSGKSSMRSIVFSNYVAKDTRRLGATIDIEHSHVRFLGNLV-LNLWDCGGQE 62
Query: 237 RF-RTITTA----YYRGSMGIMLVYDVTN---EKSFENIKNWIRNIEENASADVEKMILG 392
F +A +R ++ V+DV + E+ +N + N S L
Sbjct: 63 AFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVAN-SPQARVFCLI 121
Query: 393 NKCDL---DAKRLVSKER 437
+K DL D + LV +ER
Sbjct: 122 HKMDLVQEDLRDLVFEER 139
>SPBC342.01c |alg6|SPBC3F6.06c|glucosyltransferase
Alg6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 506
Score = 28.7 bits (61), Expect = 0.64
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +3
Query: 72 IGDSGVGKTSILFRFSEDAFNISFISTIGIDFKI 173
IGD V ++LFRF + +F + I +GID I
Sbjct: 423 IGDMVVFSKNVLFRFIQLSFYVGMIVILGIDLFI 456
>SPAC13G6.12c |chs1|SPAC24B11.01c|chitin synthase
I|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 460 YSTANCSPLSFETSLFASRSHLF 392
YS A C P F SLF R LF
Sbjct: 160 YSAATCDPQDFSKSLFTLRQPLF 182
>SPBC83.07 |jmj3||Lid2 complex subunit Jmj3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 752
Score = 27.5 bits (58), Expect = 1.5
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 163 SIPIVEIKDIL-KASSENLNKIDVFPTPESPINSNL 59
S+ IK I + SSE + +DV PTP +N NL
Sbjct: 603 SVEPTSIKTIAAEESSEPTSSVDVAPTPVEDVNVNL 638
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1317
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 279 GIMLVYDVTNEKSFENIKNWIRNIEENASADVEKMILG 392
GI L+ + E ++ +++ I+ENA + V +++LG
Sbjct: 947 GINLITSLIKEYGKNSVLRYMKAIQENAESAVRQLLLG 984
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 27.1 bits (57), Expect = 2.0
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = -3
Query: 442 SPLSFETSLFASRSHLFPSIIFSTSALAFSSMFLIQFLMFSKLFSFVTS*TSIMPIDP 269
SP S T +F+ PSIIF + + S+F FL F+ SI P++P
Sbjct: 750 SPRSLLTKIFSEARKNAPSIIFINNVEKWPSLFSHSFLSM-----FLLLLDSISPLEP 802
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 26.2 bits (55), Expect = 3.4
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = -3
Query: 229 PAVSHICNFTFLPSRSIVRILKSIPIVEIKDILKASSENLNKIDVFPTPESPINSNLNK 53
P S++C T L +RS+ + ++ KD++ +N+NK+ V P + ++K
Sbjct: 516 PNYSNVCLSTSLINRSLPSLKSTMHPGVNKDLITRPFKNVNKMSVRKALIKPFHPPISK 574
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 25.8 bits (54), Expect = 4.5
Identities = 19/61 (31%), Positives = 34/61 (55%)
Frame = +3
Query: 57 FKLLLIGDSGVGKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQE 236
F L+L G+SG+GKT+ F F+ + S +G + K+R + K V+++I +E
Sbjct: 29 FTLMLCGESGLGKTT----FCNTLFSTTIKSHMGPE-KVRAKHAE-KTVEIEITKAELEE 82
Query: 237 R 239
+
Sbjct: 83 K 83
>SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 425
Score = 25.8 bits (54), Expect = 4.5
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -2
Query: 272 SSVVSCCYCTESFLSSCVPYL*FHFFTIKVYCSNFKVDTNC*NKRYI 132
SS +SC C + S+ + F+ K+Y S F NK+ +
Sbjct: 247 SSDISCPNCNDQLTSTTAIEVGHAFYLGKIYSSKFNATVEVKNKQEV 293
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 25.8 bits (54), Expect = 4.5
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +3
Query: 195 KKVKLQIWDTAGQERFRTITTAYYRGSMGI-MLVYDVTNEKSFENIKNWIRNIEENAS 365
K ++L I D R T+T G++ + ++YDV++++ +KN IRN + +++
Sbjct: 403 KPLRLSIDDVYRSPRSVTVTGRVEAGNVQVNQVLYDVSSQED-AYVKNVIRNSDPSST 459
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 25.8 bits (54), Expect = 4.5
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 5/32 (15%)
Frame = -2
Query: 272 SSVVSCCYCTESFLSSCV-----PYL*FHFFT 192
SS+V+CC C ++ +CV P+ H++T
Sbjct: 307 SSLVTCCICQSNYHYACVEAPFAPFSDIHYWT 338
>SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit
Rep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 472
Score = 25.4 bits (53), Expect = 6.0
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -2
Query: 257 CCYCTESFLS 228
CCYCT+ FLS
Sbjct: 422 CCYCTKPFLS 431
>SPAC56F8.06c |alg10||dolichyl-phosphate-glucose-glycolipid
alpha-glucosyltransferase Alg10|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 445
Score = 25.4 bits (53), Expect = 6.0
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -2
Query: 356 LFNVPYPVFNVFKALFICYIINKHYAH--RSSVVSCCYCTESFLSSCVPYL*FHFFTI 189
L + Y ++ F F YII +H RS ++S + +SFL V L HF TI
Sbjct: 256 LSQINYFLWFFFFFSFPSYIIKYLMSHSRRSKLLSAVFSKKSFLIVSVLLLIAHFNTI 313
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.0 bits (52), Expect = 7.9
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = -3
Query: 508 STFNESLAEVSTNFI*YSTANCSPLSFETSLFASRSHLFPSIIFSTSALAFSSM 347
ST + SLA STN ST + +P S TS +S S S ++S+LA SS+
Sbjct: 153 STTSSSLASSSTN----STTSATPTSSATS--SSLSSTAASNSATSSSLASSSL 200
>SPAC30D11.06c |||DUF300 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 426
Score = 25.0 bits (52), Expect = 7.9
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = -3
Query: 256 VVIVRNLSCPAV-SHICNFTF-LPSRSIVRILKSIPIVEIKDILKASSENLNKI 101
V I LSC ++ +H+ N+ + RS+VRIL I I L +E + I
Sbjct: 13 VAIALVLSCISIITHLKNYKKPVLQRSVVRILMMIVIYSSVSFLSVYNEKIGSI 66
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 25.0 bits (52), Expect = 7.9
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 481 VSTNFI*YSTANCSPLSFETSLFASR 404
+S+N Y N SP+ TSLF+SR
Sbjct: 484 LSSNVPLYPAYNSSPVQTRTSLFSSR 509
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,123,698
Number of Sequences: 5004
Number of extensions: 40326
Number of successful extensions: 202
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 244081442
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -