Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_N05
         (573 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    27   0.17 
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    25   0.70 
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.1  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.1  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   2.8  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   2.8  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   2.8  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.0  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.7  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 291 VYDVTNEKSFENIKNWIRNIEENASADVEKMILGNKCDLDAKRLVSKERGE-QLAVEYQI 467
           +Y +     F+N +   +  EE     V+   + + C LD  +L+  ++GE Q  +E + 
Sbjct: 49  LYTLKTTSPFKNTEIKFKLGEEFEEETVDGRKVKSVCTLDGNKLIQVQKGEKQTTIEREF 108

Query: 468 KFVETSA 488
              E  A
Sbjct: 109 SSTEMKA 115


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 231 VQLCPIFVISLFYHQ 187
           +Q+CPI++ S  YH+
Sbjct: 127 IQICPIYIESFSYHK 141


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 226 AVSHICNFTFLPSRSIVRILKSIP 155
           AVSHICN T      +V   K IP
Sbjct: 230 AVSHICNATNKQLFQLVAWAKHIP 253


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -3

Query: 226 AVSHICNFTFLPSRSIVRILKSIP 155
           AVSHICN T      +V   K IP
Sbjct: 230 AVSHICNATNKQLFQLVAWAKHIP 253


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 17/75 (22%), Positives = 31/75 (41%)
 Frame = +3

Query: 90  GKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYR 269
           G+  I++  S+D+F+    +T   D K   + +DG+    Q  D         +T   Y 
Sbjct: 210 GEGLIVYHNSDDSFHRLTSNTFDYDPKFTKMTIDGESYTAQ--DGISGMALSPMTNNLYY 267

Query: 270 GSMGIMLVYDVTNEK 314
             +    +Y V  E+
Sbjct: 268 SPVASTSLYYVNTEQ 282


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 17/75 (22%), Positives = 31/75 (41%)
 Frame = +3

Query: 90  GKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYR 269
           G+  I++  S+D+F+    +T   D K   + +DG+    Q  D         +T   Y 
Sbjct: 210 GEGLIVYHNSDDSFHRLTSNTFDYDPKFTKMTIDGESYTAQ--DGISGMALSPMTNNLYY 267

Query: 270 GSMGIMLVYDVTNEK 314
             +    +Y V  E+
Sbjct: 268 SPVASTSLYYVNTEQ 282


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 17/75 (22%), Positives = 31/75 (41%)
 Frame = +3

Query: 90  GKTSILFRFSEDAFNISFISTIGIDFKIRTIDLDGKKVKLQIWDTAGQERFRTITTAYYR 269
           G+  I++  S+D+F+    +T   D K   + +DG+    Q  D         +T   Y 
Sbjct: 210 GEGLIVYHNSDDSFHRLTSNTFDYDPKFTKMTIDGESYTAQ--DGISGMALSPMTNNLYY 267

Query: 270 GSMGIMLVYDVTNEK 314
             +    +Y V  E+
Sbjct: 268 SPVASTSLYYVNTEQ 282


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = -2

Query: 572 TRFLFVLHLRFNVSRQSIKGIF 507
           TR L  +HL +N  R   KGIF
Sbjct: 284 TRDLREIHLAYNGLRDLPKGIF 305


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -1

Query: 252 LLYGIFLVQLCPIFVISLF 196
           ++ G+F++   P FV++L+
Sbjct: 339 IVMGVFIICWLPFFVVNLW 357


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,039
Number of Sequences: 438
Number of extensions: 3040
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)