Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_N01
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30215-7|CAA82940.1|  322|Caenorhabditis elegans Hypothetical pr...    29   2.7  
Z29560-13|CAA82665.1|  322|Caenorhabditis elegans Hypothetical p...    29   2.7  
AF016451-8|AAB66004.2|  354|Caenorhabditis elegans Serpentine re...    28   6.2  
U67953-1|AAQ91892.1|  398|Caenorhabditis elegans Hypothetical pr...    27   8.2  
U15167-1|AAB66360.1|  445|Caenorhabditis elegans serotonin recep...    27   8.2  
AL132877-18|CAC70116.1|  362|Caenorhabditis elegans Hypothetical...    27   8.2  
AL032643-7|CAA21659.2|  362|Caenorhabditis elegans Hypothetical ...    27   8.2  
AC084154-13|AAK29875.2|  445|Caenorhabditis elegans Serotonin/oc...    27   8.2  

>Z30215-7|CAA82940.1|  322|Caenorhabditis elegans Hypothetical
           protein K03H1.10 protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +1

Query: 19  DLTKYCLKLSREFLSSSFCENNYFA**CIRMYYTTTVDKEKKCKLIMRGAAESMTD 186
           DL  Y  K+ +E   ++    NY+     ++Y      +EKK   + +GAA+S  D
Sbjct: 203 DLNAYARKVEKEVFETAIDRKNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLD 258


>Z29560-13|CAA82665.1|  322|Caenorhabditis elegans Hypothetical
           protein K03H1.10 protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 16/56 (28%), Positives = 27/56 (48%)
 Frame = +1

Query: 19  DLTKYCLKLSREFLSSSFCENNYFA**CIRMYYTTTVDKEKKCKLIMRGAAESMTD 186
           DL  Y  K+ +E   ++    NY+     ++Y      +EKK   + +GAA+S  D
Sbjct: 203 DLNAYARKVEKEVFETAIDRKNYYHLLAEKIYEIQKELQEKKNSRLNQGAAQSPLD 258


>AF016451-8|AAB66004.2|  354|Caenorhabditis elegans Serpentine
           receptor, class t protein65 protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 24/84 (28%), Positives = 35/84 (41%)
 Frame = -3

Query: 597 FCEIGLFFC*PTMIL*IRPSLLFCFLGFSSVLLAIIAQNVLRTYFVLSSLKIAVVSLSYM 418
           F E+ L  C PT+ L     +L  +  +    LA  + + LRT   +  L  A V  +YM
Sbjct: 217 FAELELVLCFPTLALSFCSYILIIYSIYKKRKLAQSSSSSLRT--EIGILIQATVLTTYM 274

Query: 417 FGDILTFWHQLARAHFTRTLTLLT 346
              ++T WH           TL T
Sbjct: 275 -ALLITLWHNAESWFQMNNFTLAT 297


>U67953-1|AAQ91892.1|  398|Caenorhabditis elegans Hypothetical
           protein ZC13.1b protein.
          Length = 398

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -2

Query: 481 CFANLFRFILIENSR--CFFVLHVWRYPYFLAPACKSSFHKNADTTDSRDGGVNI 323
           C  +L + I +E +   C F +  W       P C++   K+AD  D ++GG ++
Sbjct: 340 CHGDLLQPIKLECTHVFCKFCIETWLDQKSTCPICRAEVTKDAD-NDWKNGGTSL 393


>U15167-1|AAB66360.1|  445|Caenorhabditis elegans serotonin receptor
           precursor protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = -3

Query: 537 LLFCFLGFSSVLLAIIAQNVLR---TYFVLSSLKIA 439
           +L CF+G   V+LAII +  LR    Y+++ SL +A
Sbjct: 62  ILSCFIGNLFVILAIIMERDLRGRPQYYLIFSLAVA 97


>AL132877-18|CAC70116.1|  362|Caenorhabditis elegans Hypothetical
           protein Y54E5A.1 protein.
          Length = 362

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -2

Query: 229 LMKNSIKIKKL*KYDPSLTQRLLSLLVYIFFLC 131
           ++K   ++KKL   DPSL   + SL+++  F+C
Sbjct: 26  IVKKYPEVKKLFGVDPSLKYVVSSLVIFQIFMC 58


>AL032643-7|CAA21659.2|  362|Caenorhabditis elegans Hypothetical
           protein Y54E5A.1 protein.
          Length = 362

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -2

Query: 229 LMKNSIKIKKL*KYDPSLTQRLLSLLVYIFFLC 131
           ++K   ++KKL   DPSL   + SL+++  F+C
Sbjct: 26  IVKKYPEVKKLFGVDPSLKYVVSSLVIFQIFMC 58


>AC084154-13|AAK29875.2|  445|Caenorhabditis elegans
           Serotonin/octopamine receptor familyprotein 4 protein.
          Length = 445

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 3/36 (8%)
 Frame = -3

Query: 537 LLFCFLGFSSVLLAIIAQNVLR---TYFVLSSLKIA 439
           +L CF+G   V+LAII +  LR    Y+++ SL +A
Sbjct: 62  ILSCFIGNLFVILAIIMERDLRGRPQYYLIFSLAVA 97


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,356,453
Number of Sequences: 27780
Number of extensions: 254779
Number of successful extensions: 612
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 612
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)