Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_M23
         (678 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              49   4e-08
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   2.0  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.0  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    23   2.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   8.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   8.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   8.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   8.2  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 49.2 bits (112), Expect = 4e-08
 Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
 Frame = +2

Query: 326 DPCMKVHCSAGRVCEINEHGE-AICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 502
           DPC   +C  G+ CE++ +   A+C C+++CP      R VC +  + +++ CE++R  C
Sbjct: 80  DPCASKYCGIGKECELSPNSTIAVCVCMRKCPRR---HRPVCASNGKIYANHCELHRAAC 136



 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 50  DPPGCRIRHEARGRRHLHGRRQ 115
           +P  CR RHE R    + G ++
Sbjct: 518 EPSACRPRHEIRSTDVIPGTQE 539


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -3

Query: 274 GDTSSSAPESSLVQASPCRSRGAPTRRCPRG 182
           G+ S  +P +S   A  C S    T R P+G
Sbjct: 734 GEASPRSPNASPSPAEQCASTTTITARSPQG 764


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +2

Query: 2   SLREQAGAHRVAASNMDPPGCRIRHEARGRRHLHGRR 112
           S   Q G H +  + M PP     H+ +  +HLH R+
Sbjct: 333 SPHHQHGNHTMGPT-MGPPHHHHHHQTQSLQHLHYRQ 368


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 14/48 (29%), Positives = 17/48 (35%)
 Frame = +2

Query: 74  HEARGRRHLHGRRQSKNIVDASALTYDDYERRRRGFPAGTSPSRSTSR 217
           H  RG+R   G   S +    +   Y D   R   FP      RS  R
Sbjct: 260 HGMRGKRDAAGIYGSNSSTVGTIFGYQDMRNRGNNFPVYQVEKRSPFR 307


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
 Frame = -2

Query: 515 GRG---RGSAVGTPRSPMTRSR*SL 450
           GRG    GS  G+PRSP + SR S+
Sbjct: 310 GRGSVHNGSNNGSPRSPESNSRCSV 334


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = +2

Query: 566 YGTCREMPEC--SENEMSDFPRRMRDWLFNIMRDLAERR 676
           +  C ++ E   S NE++  P  +RD       DL E R
Sbjct: 427 FRNCSDLKELDLSGNELTSVPDALRDLALLKTLDLGENR 465


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/53 (22%), Positives = 18/53 (33%)
 Frame = -2

Query: 665 PGRALC*TASRACAAGSLTFRSRCTPAFPCKSRSTRSARGGTAPRGTAPSGRG 507
           PG  L     + C     +   R      CK+ +  + RGG         G+G
Sbjct: 536 PGAPLDSKLCQQCVGNLASNNDRIRQVTKCKATNEETYRGGKGALSCLLDGKG 588


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/53 (22%), Positives = 18/53 (33%)
 Frame = -2

Query: 665 PGRALC*TASRACAAGSLTFRSRCTPAFPCKSRSTRSARGGTAPRGTAPSGRG 507
           PG  L     + C     +   R      CK+ +  + RGG         G+G
Sbjct: 536 PGAPLDSKLCQQCVGNLASNNDRIRQVTKCKATNEETYRGGKGALSCLLDGKG 588


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/53 (22%), Positives = 18/53 (33%)
 Frame = -2

Query: 665 PGRALC*TASRACAAGSLTFRSRCTPAFPCKSRSTRSARGGTAPRGTAPSGRG 507
           PG  L     + C     +   R      CK+ +  + RGG         G+G
Sbjct: 536 PGAPLDSKLCQQCVGNLASNNDRIRQVTKCKATNEETYRGGKGALSCLLDGKG 588


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,182
Number of Sequences: 438
Number of extensions: 4025
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)