Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_M21
         (603 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               23   1.7  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   7.0  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                21   7.0  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   9.3  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   9.3  

>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -3

Query: 292 SRCYIDYLHFH 260
           SRC IDY+ FH
Sbjct: 118 SRCVIDYVKFH 128


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +2

Query: 365 DEKASRETMDEEGYLKTGDIGY 430
           D K     +D +GY+K  D G+
Sbjct: 491 DLKPENLLLDSQGYVKLVDFGF 512


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = +3

Query: 381 ERQWTRRDTLRPVISDIMTKM 443
           ++ W++  T RP  ++++TK+
Sbjct: 290 KQMWSQNITERPTTNEVITKI 310


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 266 LSPLVVDNHRSPVFV 222
           L+P + D HR+P F+
Sbjct: 12  LNPKLYDKHRAPKFL 26


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +2

Query: 311 QEGEICIKGPIVMKGYAGDEKASRET 388
           + GEI +KG  +MK Y  +++  R +
Sbjct: 578 ERGEIEVKGKGIMKTYWLEKREHRSS 603


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,269
Number of Sequences: 438
Number of extensions: 3754
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)