Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_M18
         (481 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ...    29   1.3  
Z27079-3|CAA81590.1|  332|Caenorhabditis elegans Hypothetical pr...    29   1.7  
X68384-1|CAA48455.1|  332|Caenorhabditis elegans protein ( C.ele...    29   1.7  
S75262-1|AAC60520.1|  332|Caenorhabditis elegans p34cdc2 kinase ...    29   1.7  
AF129109-1|AAD37119.1|  332|Caenorhabditis elegans CDK1 ortholog...    29   1.7  
AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical...    28   4.0  
AF022968-4|AAB69886.2|  458|Caenorhabditis elegans Hypothetical ...    28   4.0  
AF022968-3|AAV28363.1|  482|Caenorhabditis elegans Hypothetical ...    28   4.0  
U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose 6-pho...    27   5.3  
U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose 6-pho...    27   5.3  
AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative treh...    27   5.3  
AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans trehalose-6-p...    27   5.3  

>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
            protein F54G2.2 protein.
          Length = 1023

 Score = 29.5 bits (63), Expect = 1.3
 Identities = 17/55 (30%), Positives = 27/55 (49%)
 Frame = +2

Query: 110  VNSIQISNGPLRRFSSLDITITYVPNVESRRFYAQEAKPAPMIADYDYVKKATKD 274
            V  I+ISN P+RR       + Y   V +++ Y Q A+    I +   +KK  +D
Sbjct: 890  VEVIEISNKPVRRNMFDQWQLIYEDQVRAQQRYEQNAEKRAKIVEAGRLKKKKRD 944


>Z27079-3|CAA81590.1|  332|Caenorhabditis elegans Hypothetical
           protein T05G5.3 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 117 RFRSQMGRCDVFPLWILQLLTFQMWSLDDFTRRRRNLHP*LQIMTML 257
           R+  Q+G+ +  PL  L+  TFQ+     F  +RR +H  L+   +L
Sbjct: 107 RYMDQLGKDEYLPLETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLL 153


>X68384-1|CAA48455.1|  332|Caenorhabditis elegans protein (
           C.elegans mRNA for p34cdc2 homologue. ).
          Length = 332

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 117 RFRSQMGRCDVFPLWILQLLTFQMWSLDDFTRRRRNLHP*LQIMTML 257
           R+  Q+G+ +  PL  L+  TFQ+     F  +RR +H  L+   +L
Sbjct: 107 RYMDQLGKDEYLPLETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLL 153


>S75262-1|AAC60520.1|  332|Caenorhabditis elegans p34cdc2 kinase
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 117 RFRSQMGRCDVFPLWILQLLTFQMWSLDDFTRRRRNLHP*LQIMTML 257
           R+  Q+G+ +  PL  L+  TFQ+     F  +RR +H  L+   +L
Sbjct: 107 RYMDQLGKDEYLPLETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLL 153


>AF129109-1|AAD37119.1|  332|Caenorhabditis elegans CDK1 ortholog
           protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +3

Query: 117 RFRSQMGRCDVFPLWILQLLTFQMWSLDDFTRRRRNLHP*LQIMTML 257
           R+  Q+G+ +  PL  L+  TFQ+     F  +RR +H  L+   +L
Sbjct: 107 RYMDQLGKDEYLPLETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLL 153


>AF100306-10|AAC68926.1|  798|Caenorhabditis elegans Hypothetical
           protein T24C4.7 protein.
          Length = 798

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
 Frame = +2

Query: 119 IQISNGPLRRFSSLDITITYVPNVESRRFYAQEAKPAPMIADYDYVKKATKDKNVLLIDV 298
           ++ S+G +  F  L   I + P+ ES+   A  A+P  ++        A      + IDV
Sbjct: 226 VESSSGEVHTFMQL-YHIGHAPDTESQNSNADNARPMDIVFPIKPACWANHPMQYVQIDV 284

Query: 299 RE-PDELKEHGIIPNSVNIPCSVTSVL 376
            E P  +  + I  N + + C  T  L
Sbjct: 285 HEMPTSIYGNKIYDNILIVTCLKTRFL 311


>AF022968-4|AAB69886.2|  458|Caenorhabditis elegans Hypothetical
           protein C10F3.4a protein.
          Length = 458

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = +3

Query: 153 PLWILQLLTFQMWSLDDFTRRRRNLHP*LQIMT 251
           P+WI   + FQ+ SLD++ + + N++  ++ +T
Sbjct: 263 PVWICPAIVFQLDSLDNYEQFKMNIYKCVEHLT 295


>AF022968-3|AAV28363.1|  482|Caenorhabditis elegans Hypothetical
           protein C10F3.4b protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = +3

Query: 153 PLWILQLLTFQMWSLDDFTRRRRNLHP*LQIMT 251
           P+WI   + FQ+ SLD++ + + N++  ++ +T
Sbjct: 287 PVWICPAIVFQLDSLDNYEQFKMNIYKCVEHLT 319


>U58737-5|ABC71794.1| 1294|Caenorhabditis elegans Trehalose
           6-phosphate synthaseprotein 1, isoform b protein.
          Length = 1294

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +2

Query: 233 MIADYDYVKKATKDKNVLL--IDVREPDELKEHGIIPNSVNIP 355
           ++A  D V  A K KN+ L  + V   +ELKEH    NS+ +P
Sbjct: 317 LVACVDPVMSADK-KNIWLSNLGVNMQEELKEHSTSTNSLGLP 358


>U58737-4|AAK39395.3| 1331|Caenorhabditis elegans Trehalose
           6-phosphate synthaseprotein 1, isoform a protein.
          Length = 1331

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +2

Query: 233 MIADYDYVKKATKDKNVLL--IDVREPDELKEHGIIPNSVNIP 355
           ++A  D V  A K KN+ L  + V   +ELKEH    NS+ +P
Sbjct: 354 LVACVDPVMSADK-KNIWLSNLGVNMQEELKEHSTSTNSLGLP 395


>AJ811573-1|CAH18875.1| 1331|Caenorhabditis elegans putative
           trehalose 6-phosphatesynthase protein.
          Length = 1331

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +2

Query: 233 MIADYDYVKKATKDKNVLL--IDVREPDELKEHGIIPNSVNIP 355
           ++A  D V  A K KN+ L  + V   +ELKEH    NS+ +P
Sbjct: 354 LVACVDPVMSADK-KNIWLSNLGVNMQEELKEHSTSTNSLGLP 395


>AJ512332-1|CAD54506.1| 1331|Caenorhabditis elegans
           trehalose-6-phosphate synthase protein.
          Length = 1331

 Score = 27.5 bits (58), Expect = 5.3
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +2

Query: 233 MIADYDYVKKATKDKNVLL--IDVREPDELKEHGIIPNSVNIP 355
           ++A  D V  A K KN+ L  + V   +ELKEH    NS+ +P
Sbjct: 354 LVACVDPVMSADK-KNIWLSNLGVNMQEELKEHSTSTNSLGLP 395


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,320,769
Number of Sequences: 27780
Number of extensions: 206385
Number of successful extensions: 558
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 882200194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)