Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_M14
(398 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellu... 167 5e-41
UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishma... 136 1e-31
UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|R... 113 9e-25
UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1; Ostreoc... 104 6e-22
UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiell... 88 7e-17
UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15; Archa... 87 1e-16
UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2; Thermo... 85 5e-16
UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultu... 81 6e-15
UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole ge... 68 8e-11
UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1; ... 64 7e-10
UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3; ... 60 1e-08
UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n... 54 1e-06
UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15; Bacter... 52 5e-06
UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3; ... 50 2e-05
UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular or... 49 4e-05
UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48; Bacter... 48 5e-05
UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellul... 47 2e-04
UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellu... 46 3e-04
UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis... 46 4e-04
UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellu... 45 5e-04
UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellu... 43 0.003
UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33; Bacter... 42 0.003
UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus ... 42 0.004
UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1; Neorick... 42 0.006
UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putati... 40 0.014
UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps... 40 0.014
UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whol... 40 0.024
UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11; ... 40 0.024
UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29; ... 38 0.055
UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=... 36 0.22
UniRef50_Q5SJA5 Cluster: Putative glycosyltransferase; n=1; Ther... 36 0.29
UniRef50_Q9ZV33 Cluster: Dof zinc finger protein DOF2.2; n=4; Ar... 36 0.29
UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;... 36 0.39
UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11; ... 35 0.51
UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=... 34 0.89
UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein ... 34 1.2
UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639... 34 1.2
UniRef50_A7EEV7 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 1.6
UniRef50_Q8W9P7 Cluster: Ribosomal protein S11; n=1; Mesostigma ... 33 2.1
UniRef50_A2YZN7 Cluster: Putative uncharacterized protein; n=2; ... 33 2.1
UniRef50_Q9PQN5 Cluster: 30S ribosomal protein S11; n=1; Ureapla... 33 2.7
UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma ... 32 3.6
UniRef50_UPI0000586A1C Cluster: PREDICTED: hypothetical protein;... 32 4.8
UniRef50_Q4RG55 Cluster: Chromosome 2 SCAF15106, whole genome sh... 32 4.8
UniRef50_Q2UBW7 Cluster: Predicted protein; n=1; Aspergillus ory... 32 4.8
UniRef50_UPI0001552E13 Cluster: PREDICTED: hypothetical protein;... 31 6.3
UniRef50_A2QS40 Cluster: Remark: ATR1 encodes a Myb-like transcr... 31 6.3
UniRef50_UPI0000E470A7 Cluster: PREDICTED: similar to ficolin 3;... 31 8.3
UniRef50_UPI000023D863 Cluster: hypothetical protein FG05948.1; ... 31 8.3
UniRef50_Q1NHD4 Cluster: Putative uncharacterized protein; n=1; ... 31 8.3
UniRef50_A6GFJ6 Cluster: Acyl-CoA dehydrogenase; n=1; Plesiocyst... 31 8.3
UniRef50_A5V8T7 Cluster: Putative uncharacterized protein precur... 31 8.3
UniRef50_A4A0V8 Cluster: Sodium:alanine symporter; n=1; Blastopi... 31 8.3
UniRef50_Q4DXL1 Cluster: Putative uncharacterized protein; n=2; ... 31 8.3
UniRef50_Q0UJD5 Cluster: Predicted protein; n=1; Phaeosphaeria n... 31 8.3
UniRef50_P25370 Cluster: Good for full DBP5 activity protein 2; ... 31 8.3
UniRef50_P33076 Cluster: MHC class II transactivator; n=39; Euth... 31 8.3
>UniRef50_P62263 Cluster: 40S ribosomal protein S14; n=231; cellular
organisms|Rep: 40S ribosomal protein S14 - Homo sapiens
(Human)
Length = 151
Score = 167 bits (407), Expect = 5e-41
Identities = 81/99 (81%), Positives = 87/99 (87%)
Frame = +3
Query: 27 MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 206
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 207 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99
>UniRef50_Q4Q6S9 Cluster: 40S ribosomal protein S14; n=1; Leishmania
major|Rep: 40S ribosomal protein S14 - Leishmania major
Length = 203
Score = 136 bits (329), Expect = 1e-31
Identities = 63/90 (70%), Positives = 75/90 (83%)
Frame = +3
Query: 54 KEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEA 233
K+EV+ GP G++V+GV HIFASFNDTFVHVTD+SGRET +VTGGMKVKADRDE+
Sbjct: 13 KQEVKA-YGPNVKKGDLVYGVVHIFASFNDTFVHVTDMSGRETYVKVTGGMKVKADRDES 71
Query: 234 SPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
SPYAAM+AAQDV +CK GI ALH+K+RA
Sbjct: 72 SPYAAMMAAQDVVARCKECGINALHVKMRA 101
>UniRef50_Q58NR0 Cluster: Ribosomal protein S14; n=6; Eukaryota|Rep:
Ribosomal protein S14 - Palaemonetes pugio
Length = 77
Score = 113 bits (273), Expect = 9e-25
Identities = 55/70 (78%), Positives = 58/70 (82%)
Frame = +3
Query: 27 MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 206
MAPRK K KEEVQV LGPQ GE VF V HI+AS+NDTFVHVTDLSGRETI RVTGG
Sbjct: 1 MAPRKGKTPKEEVQVQLGPQVREGENVFAVCHIYASYNDTFVHVTDLSGRETIIRVTGGQ 60
Query: 207 KVKADRDEAS 236
KVKADRDE+S
Sbjct: 61 KVKADRDESS 70
>UniRef50_Q01E13 Cluster: 40S ribosomal protein S14; n=1;
Ostreococcus tauri|Rep: 40S ribosomal protein S14 -
Ostreococcus tauri
Length = 243
Score = 104 bits (250), Expect = 6e-22
Identities = 48/57 (84%), Positives = 54/57 (94%)
Frame = +3
Query: 153 HVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
HVTDLSG+ET++R TGGMKVKADRDE+SPYAAMLAAQDVA +CK LGITALHIK+RA
Sbjct: 90 HVTDLSGKETLSRCTGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKMRA 146
Score = 50.0 bits (114), Expect = 2e-05
Identities = 25/40 (62%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +3
Query: 36 RKNKVAKEEVQVT-LGPQHLVGEIVFGVAHIFASFNDTFV 152
R V+ V T +GPQ GE+VFGVAHIFASFNDTFV
Sbjct: 5 RHRSVSVRRVMATYVGPQAREGELVFGVAHIFASFNDTFV 44
>UniRef50_Q3LWB9 Cluster: Ribosomal protein S14; n=1; Bigelowiella
natans|Rep: Ribosomal protein S14 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 145
Score = 87.8 bits (208), Expect = 7e-17
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = +3
Query: 93 VGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVA 272
+ + +FG+ HI ++ NDT +HVTD++G ETI+R++ G+ +D+ S Y AMLA Q V+
Sbjct: 7 IKKYLFGILHILSTKNDTIIHVTDITGSETISRISSGIVATNGKDKKSNYCAMLATQKVS 66
Query: 273 EKCKTLGITALHIKLRA 323
CK LGI ALHIK+RA
Sbjct: 67 NVCKVLGINALHIKIRA 83
>UniRef50_P54021 Cluster: 30S ribosomal protein S11P; n=15;
Archaea|Rep: 30S ribosomal protein S11P - Methanococcus
jannaschii
Length = 129
Score = 87.0 bits (206), Expect = 1e-16
Identities = 39/72 (54%), Positives = 53/72 (73%)
Frame = +3
Query: 108 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKT 287
+G+ HI++S+N+T +H TD++G ETIARV+GG + RDE SPYAAM AA +AE K
Sbjct: 9 WGIVHIYSSYNNTIIHATDITGAETIARVSGGRVTRNQRDEGSPYAAMQAAFKLAEVLKE 68
Query: 288 LGITALHIKLRA 323
GI +HIK+RA
Sbjct: 69 RGIENIHIKVRA 80
>UniRef50_A0RWI9 Cluster: 30S ribosomal protein S11P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S11P -
Cenarchaeum symbiosum
Length = 198
Score = 85.0 bits (201), Expect = 5e-16
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +3
Query: 81 PQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 260
P+ + G+AHI++S+N+T +H+TDL+G ET++ +GG+ V ADR E+SP+AAM AA
Sbjct: 66 PETTPADEKLGIAHIYSSYNNTIIHMTDLTGAETVSISSGGVHVNADRYESSPFAAMKAA 125
Query: 261 QDVAEKCKTLGITALHIKLRA 323
V E + G T HI++RA
Sbjct: 126 NKVIESARAKGFTGFHIRVRA 146
>UniRef50_A0SNY7 Cluster: 30S ribosomal protein S11; n=1; uncultured
euryarchaeote ARMAN-2|Rep: 30S ribosomal protein S11 -
uncultured euryarchaeote ARMAN-2
Length = 169
Score = 81.4 bits (192), Expect = 6e-15
Identities = 40/72 (55%), Positives = 52/72 (72%)
Frame = +3
Query: 108 FGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKT 287
+ VAH+++S NDT + +TDLSG ETIA +GGM V AD E SPYAAM AA VA + K
Sbjct: 46 WAVAHVYSSKNDTIITLTDLSGSETIAVGSGGMMVNADSQEGSPYAAMQAAYKVAAEAKE 105
Query: 288 LGITALHIKLRA 323
GIT ++I++RA
Sbjct: 106 KGITNINIEIRA 117
>UniRef50_A7QYG3 Cluster: Chromosome chr17 scaffold_246, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_246, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 182
Score = 67.7 bits (158), Expect = 8e-11
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 177 ETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
ET+ R TGGMK K D +E+SP AAM AAQDV+++CK L IT LH+KL A
Sbjct: 50 ETLVRTTGGMKEKTDGEESSPCAAMPAAQDVSQECKELDITVLHVKLHA 98
>UniRef50_A5BMD1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 104
Score = 64.5 bits (150), Expect = 7e-10
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +3
Query: 177 ETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
ET+ R TGGMK KAD +E+SP AAM AAQDV+++ K L IT LH+KL A
Sbjct: 29 ETLVRSTGGMKEKADGEESSPCAAMPAAQDVSQRFKELDITVLHVKLHA 77
>UniRef50_A4D1M5 Cluster: Similar to ribosomal protein S14; n=3;
Homo/Pan/Gorilla group|Rep: Similar to ribosomal protein
S14 - Homo sapiens (Human)
Length = 350
Score = 60.5 bits (140), Expect = 1e-08
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +3
Query: 204 MKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
MK +AD+DE+SP AML AQDV ++CK LGITALHIKL A
Sbjct: 1 MKEQADQDESSPCTAMLTAQDVVQRCKELGITALHIKLLA 40
>UniRef50_UPI0000DBF82A Cluster: UPI0000DBF82A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBF82A UniRef100 entry -
Rattus norvegicus
Length = 119
Score = 54.0 bits (124), Expect = 1e-06
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +3
Query: 69 VTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGR-ETIARVTGGMKVKADRDEASPYA 245
++L PQ + G+ V GV +IFASF D+F++ TD+ G+ T VT MK + E +P
Sbjct: 5 LSLRPQVVEGQNVLGVCYIFASFGDSFIYGTDVYGKVNTCQYVTSRMKTQ--YAETNPCH 62
Query: 246 AMLA-AQDVAEKCKTLGITALHIKLR 320
+ A DV + K + + ALHI+L+
Sbjct: 63 RLHAGCLDVTHRFKEMSVPALHIRLQ 88
>UniRef50_Q5LW33 Cluster: 30S ribosomal protein S11; n=15;
Bacteria|Rep: 30S ribosomal protein S11 - Silicibacter
pomeroyi
Length = 130
Score = 51.6 bits (118), Expect = 5e-06
Identities = 25/73 (34%), Positives = 43/73 (58%)
Frame = +3
Query: 102 IVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKC 281
I GVAH+ ++FN+T + ++D+ G G M K R +++PYAA LAA+D K
Sbjct: 17 IASGVAHVNSTFNNTKILISDVQGNAISWSSAGTMGFKGSR-KSTPYAAQLAAEDAGRKA 75
Query: 282 KTLGITALHIKLR 320
+ G+ L ++++
Sbjct: 76 QDHGVKTLEVEVQ 88
>UniRef50_A3A282 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 332
Score = 50.0 bits (114), Expect = 2e-05
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 192 VTGGMKVKADRDEASPYAAMLAAQDVAEKCK 284
V GGMK+KAD DE+SPYAAML +QDVA CK
Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQDVALCCK 241
>UniRef50_A6YE90 Cluster: Ribosomal protein S11; n=5; cellular
organisms|Rep: Ribosomal protein S11 - Chlorokybus
atmophyticus (Soil alga)
Length = 262
Score = 48.8 bits (111), Expect = 4e-05
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 290
GVAHI + N+T + +TDL G +G + K R + S YAA AA+ A+K L
Sbjct: 152 GVAHIQTTLNNTIITITDLDGNTKSWSSSGSIGFKGSRRKTS-YAAQAAAETAAKKSIQL 210
Query: 291 GITALHIKLR 320
GI + +K+R
Sbjct: 211 GIKDVTVKIR 220
>UniRef50_P59378 Cluster: 30S ribosomal protein S11; n=48;
Bacteria|Rep: 30S ribosomal protein S11 - Streptococcus
mutans
Length = 127
Score = 48.4 bits (110), Expect = 5e-05
Identities = 22/70 (31%), Positives = 41/70 (58%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 290
G+AHI A+FN+T V +TD+ G G + K R +++P+AA +AA+ A+ +
Sbjct: 17 GIAHIHATFNNTIVMITDVHGNALAWSSAGALGFKGSR-KSTPFAAQMAAEAAAKSAQEH 75
Query: 291 GITALHIKLR 320
G+ + + ++
Sbjct: 76 GLKTVEVTVK 85
>UniRef50_P59375 Cluster: 30S ribosomal protein S11; n=85; cellular
organisms|Rep: 30S ribosomal protein S11 - Shewanella
oneidensis
Length = 130
Score = 46.8 bits (106), Expect = 2e-04
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = +3
Query: 99 EIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEK 278
++ G+AHI ASFN+T V +TD G +GG + R +++P+AA +AA+
Sbjct: 16 QVADGMAHIHASFNNTIVTITDRQGNALSWATSGGSGFRGSR-KSTPFAAQVAAERAGAA 74
Query: 279 CKTLGITALHI 311
+ G+ L +
Sbjct: 75 AQDYGLKNLEV 85
>UniRef50_Q12G79 Cluster: 30S ribosomal protein S11; n=186; cellular
organisms|Rep: 30S ribosomal protein S11 - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 134
Score = 46.0 bits (104), Expect = 3e-04
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 290
G+AH+ ASFN+T + +TD G +GG K R +++P+AA +A++
Sbjct: 24 GIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVASEVAGRAAIEQ 82
Query: 291 GITALHIKLR 320
GI L ++++
Sbjct: 83 GIKNLDVEIK 92
>UniRef50_A6PT07 Cluster: Ribosomal protein S11; n=1; Victivallis
vadensis ATCC BAA-548|Rep: Ribosomal protein S11 -
Victivallis vadensis ATCC BAA-548
Length = 148
Score = 45.6 bits (103), Expect = 4e-04
Identities = 23/70 (32%), Positives = 41/70 (58%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 290
G+A++ A+FN+T V TDL G I TGG +++ YAA + A D A+K + +
Sbjct: 38 GIAYVLATFNNTKVTFTDLHG-NVICWSTGGKNGFKGSRKSTAYAAQVIAGDAAKKAQLV 96
Query: 291 GITALHIKLR 320
G+ + ++++
Sbjct: 97 GMKEVEVRIK 106
>UniRef50_Q1IS96 Cluster: 30S ribosomal protein S11; n=274; cellular
organisms|Rep: 30S ribosomal protein S11 - Acidobacteria
bacterium (strain Ellin345)
Length = 142
Score = 45.2 bits (102), Expect = 5e-04
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 290
G+AHI ASFN+T V ++D SG + +G + + R + +P+AA AA A +
Sbjct: 32 GLAHIQASFNNTIVTISDPSGNVVSWKSSGSLGFRGSR-KGTPFAAQQAAMTAANMARDH 90
Query: 291 GITALHIKL 317
G+ +L +++
Sbjct: 91 GMRSLDVRV 99
>UniRef50_P04969 Cluster: 30S ribosomal protein S11; n=155; cellular
organisms|Rep: 30S ribosomal protein S11 - Bacillus
subtilis
Length = 131
Score = 42.7 bits (96), Expect = 0.003
Identities = 21/70 (30%), Positives = 39/70 (55%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 290
G+AHI ++FN+T V +TD G G + + R +++P+AA +AA+ A+
Sbjct: 21 GIAHIRSTFNNTIVTITDTHGNAISWSSAGALGFRGSR-KSTPFAAQMAAETAAKGSIEH 79
Query: 291 GITALHIKLR 320
G+ L + ++
Sbjct: 80 GLKTLEVTVK 89
>UniRef50_Q98Q07 Cluster: 30S ribosomal protein S11; n=33;
Bacteria|Rep: 30S ribosomal protein S11 - Mycoplasma
pulmonis
Length = 136
Score = 42.3 bits (95), Expect = 0.003
Identities = 24/70 (34%), Positives = 40/70 (57%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 290
GVAHI ++ N+T V +D G +G + K + + + YAA LAAQ+ +EK K
Sbjct: 21 GVAHIHSTHNNTIVTFSDEKGNVISWASSGTIGYKGTKKKTA-YAAGLAAQNASEKAKEH 79
Query: 291 GITALHIKLR 320
GI + ++++
Sbjct: 80 GIREVSVRVK 89
>UniRef50_A0NHE9 Cluster: Ribosomal protein S11; n=1; Oenococcus
oeni ATCC BAA-1163|Rep: Ribosomal protein S11 -
Oenococcus oeni ATCC BAA-1163
Length = 113
Score = 41.9 bits (94), Expect = 0.004
Identities = 22/70 (31%), Positives = 39/70 (55%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 290
GVAHI ++FN+T V +TD +G G + K R +++P+AA LA + A+
Sbjct: 22 GVAHIHSTFNNTIVLITDEAGNAVSWSSAGSLGFKGSR-KSTPFAAQLAGEAAAKAAMEQ 80
Query: 291 GITALHIKLR 320
+ ++ I ++
Sbjct: 81 NMHSVAISVK 90
>UniRef50_Q2GEB7 Cluster: 30S ribosomal protein S11; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S11 - Neorickettsia sennetsu (strain Miyayama)
Length = 120
Score = 41.5 bits (93), Expect = 0.006
Identities = 22/72 (30%), Positives = 39/72 (54%)
Frame = +3
Query: 102 IVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKC 281
IV G AH+ +FN+ ++ VTD G +G + K ++ +++ YAA A + K
Sbjct: 7 IVSGNAHVIVTFNNVYISVTDHQGNVQGWASSGSVGFKGNK-KSTAYAAQSVATTLMTKL 65
Query: 282 KTLGITALHIKL 317
K +G+ L++ L
Sbjct: 66 KRIGLKILNVHL 77
>UniRef50_Q6ASY6 Cluster: Small subunit ribosomal protein, putative;
n=19; Spermatophyta|Rep: Small subunit ribosomal
protein, putative - Oryza sativa subsp. japonica (Rice)
Length = 366
Score = 40.3 bits (90), Expect = 0.014
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +3
Query: 120 HIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGIT 299
H+ N TFV VTD+ G + G ++ + R S YAA A+ V + +G+
Sbjct: 248 HVLLKRNKTFVTVTDVRGNKKTGASAGCLEDRKGRSRLSKYAAEATAEHVGRAARKMGLK 307
Query: 300 ALHIKLR 320
++ +K++
Sbjct: 308 SVVMKVK 314
>UniRef50_Q0P3I7 Cluster: Rps11; n=1; Ostreococcus tauri|Rep: Rps11
- Ostreococcus tauri
Length = 121
Score = 40.3 bits (90), Expect = 0.014
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 123 IFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITA 302
I + N+TFV++TDL G +G + K + ++S YAA + V + C I
Sbjct: 15 ISTTLNNTFVNLTDLEGNTLCCVSSGSLGFKGSK-KSSSYAAQSTTEKVLQFCAQQSIEK 73
Query: 303 LHIKLR 320
L IKLR
Sbjct: 74 LMIKLR 79
>UniRef50_Q4S8D4 Cluster: Chromosome undetermined SCAF14706, whole
genome shotgun sequence; n=3; cellular organisms|Rep:
Chromosome undetermined SCAF14706, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 39.5 bits (88), Expect = 0.024
Identities = 19/69 (27%), Positives = 40/69 (57%)
Frame = +3
Query: 114 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 293
+AH+ A++N+T + VTD +G+ ++ R + G + + +++P AA A A K G
Sbjct: 106 IAHVKATYNNTHIQVTDSAGK-SMVRTSCGTEGFKNIKKSTPIAAQTAGISAAAKATAKG 164
Query: 294 ITALHIKLR 320
+T + + ++
Sbjct: 165 VTFVRVVVK 173
>UniRef50_P56802 Cluster: Chloroplast 30S ribosomal protein S11;
n=85; Tracheophyta|Rep: Chloroplast 30S ribosomal
protein S11 - Arabidopsis thaliana (Mouse-ear cress)
Length = 138
Score = 39.5 bits (88), Expect = 0.024
Identities = 25/81 (30%), Positives = 38/81 (46%)
Frame = +3
Query: 78 GPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLA 257
G + V I GV H+ ASFN+T V VTD+ GR G + R +P+AA A
Sbjct: 17 GSRKNVRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTR-RGTPFAAQTA 75
Query: 258 AQDVAEKCKTLGITALHIKLR 320
A + G+ ++++
Sbjct: 76 AGNAIRAVVDQGMQRAEVRIK 96
>UniRef50_Q7YDI4 Cluster: Small subunit ribosomal protein; n=29;
Magnoliophyta|Rep: Small subunit ribosomal protein -
Berberis thunbergii (Japanese barberry)
Length = 150
Score = 38.3 bits (85), Expect = 0.055
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +3
Query: 114 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 293
+ H+ N+TFV VTD G + G ++ S YAA A+ V + LG
Sbjct: 46 LVHLLPLHNNTFVTVTDARGNKKTGASAGSLEEFKGGSRLSRYAAKATAEHVGRSARNLG 105
Query: 294 ITALHIKLR 320
+ ++ +K++
Sbjct: 106 MKSVVMKVK 114
>UniRef50_P46746 Cluster: Mitochondrial ribosomal protein S11; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S11 - Prototheca wickerhamii
Length = 128
Score = 36.3 bits (80), Expect = 0.22
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 290
G+ HI ++ N+T + +TDL G G + K R +++ YA+ AA+ +A K
Sbjct: 18 GIVHIQSTTNNTLITLTDLEGNTQFFVSAGTLGFKNSR-KSTVYASGAAAEALASKAFNE 76
Query: 291 GITALHIKLR 320
G + +K++
Sbjct: 77 GYRTIIVKIK 86
>UniRef50_Q5SJA5 Cluster: Putative glycosyltransferase; n=1; Thermus
thermophilus HB8|Rep: Putative glycosyltransferase -
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 335
Score = 35.9 bits (79), Expect = 0.29
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +1
Query: 28 WPREKTKLQKRRFR*LLVPSTWWVR*YSGWHTYSPP 135
WPR ++ +R R S WW R ++GW +SPP
Sbjct: 271 WPRRRSPSARRPSRPWPPASPWWPRRWAGWPRWSPP 306
>UniRef50_Q9ZV33 Cluster: Dof zinc finger protein DOF2.2; n=4;
Arabidopsis thaliana|Rep: Dof zinc finger protein DOF2.2
- Arabidopsis thaliana (Mouse-ear cress)
Length = 340
Score = 35.9 bits (79), Expect = 0.29
Identities = 34/113 (30%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = -1
Query: 395 AGTSESTESRLGTRSRSLCLVTSSRTELNVQGSYPQGFTFLSNIL-CSQHSGVG*SLITI 219
+G S+S+ S +S S+ TS NVQ F FL + +Q G+G +L I
Sbjct: 151 SGNSKSSSSSQNKQSTSMVNATSPTNTSNVQLQTNSQFPFLPTLQNLTQLGGIGLNLAAI 210
Query: 218 SLHFHASGNTGNSFSTGQIGNVHECVIEGGEYVCHPEYYLTHQVLGTKSHLNL 60
+ + +GNT +SF +G H G + E L LG+ SH L
Sbjct: 211 NGNNGGNGNTSSSF-LNDLGFFHGGNTSGPVMGNNNENNLMTS-LGSSSHFAL 261
>UniRef50_P30059 Cluster: Plastid 30S ribosomal protein S11; n=4;
Streptophyta|Rep: Plastid 30S ribosomal protein S11 -
Epifagus virginiana (Beechdrops)
Length = 136
Score = 35.5 bits (78), Expect = 0.39
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAA 260
GV H+ SFN+T V VTD+ GR G K R + +AA +AA
Sbjct: 28 GVIHVQTSFNNTIVAVTDIKGRVVSWSSAGTCGFKGTR-RGTSFAAQIAA 76
>UniRef50_Q9TLV1 Cluster: Chloroplast 30S ribosomal protein S11;
n=10; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S11 - Cyanidium caldarium
Length = 129
Score = 35.1 bits (77), Expect = 0.51
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 102 IVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKC 281
++ G+ I ++FN+T V TD G+ IA +GG + + +P+AA A + + +
Sbjct: 16 VIDGLIIINSTFNNTIVTATDCYGK-VIAWASGGTEGFKGAKKGTPFAAQSATEKLIKAL 74
Query: 282 KTLGITALHIKL 317
G +HI +
Sbjct: 75 LEQGTQRIHISV 86
>UniRef50_Q9C6S3 Cluster: 30S ribosomal protein S11, putative; n=2;
Arabidopsis thaliana|Rep: 30S ribosomal protein S11,
putative - Arabidopsis thaliana (Mouse-ear cress)
Length = 235
Score = 34.3 bits (75), Expect = 0.89
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +3
Query: 114 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 293
+ HI N+TFV VTD G +G + + + Y A A+++ + K +G
Sbjct: 116 IIHIKMLRNNTFVTVTDSKGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRRAKAMG 175
Query: 294 ITALHIKL 317
+ ++ +K+
Sbjct: 176 LKSVVVKV 183
>UniRef50_UPI0000586F02 Cluster: PREDICTED: hypothetical protein
isoform 1; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein isoform 1 -
Strongylocentrotus purpuratus
Length = 261
Score = 33.9 bits (74), Expect = 1.2
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 114 VAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLG 293
+ +I A++N+T V V + +GR T+AR + G + + + + AA AA A K G
Sbjct: 152 IVNIKATYNNTHVSVAEHTGR-TVARTSCGTEGFKNAKKGTAIAAQTAAIAAATKAVDKG 210
Query: 294 ITALHIKLR 320
+ A+ + ++
Sbjct: 211 MNAVRVVIK 219
>UniRef50_O59305 Cluster: Putative uncharacterized protein PH1639;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PH1639 - Pyrococcus horikoshii
Length = 102
Score = 33.9 bits (74), Expect = 1.2
Identities = 24/83 (28%), Positives = 34/83 (40%)
Frame = -1
Query: 386 SESTESRLGTRSRSLCLVTSSRTELNVQGSYPQGFTFLSNILCSQHSGVG*SLITISLHF 207
S+ L T RS +S NV F S+H +G LI +S ++
Sbjct: 18 SQGPNCSLCTWPRSFAFASSWGPHPNVNTDNSLFQCFFCCSPSSKHCCIGGRLIPVSFNY 77
Query: 206 HASGNTGNSFSTGQIGNVHECVI 138
H + + F TG I NV+ VI
Sbjct: 78 HTTAPSAYRFRTGDISNVNNGVI 100
>UniRef50_A7EEV7 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 49
Score = 33.5 bits (73), Expect = 1.6
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -3
Query: 396 CWNEREHGEQTGHQVQESLSC 334
CW+ERE+G +TGH+ S C
Sbjct: 20 CWDERENGSETGHKASVSKRC 40
>UniRef50_Q8W9P7 Cluster: Ribosomal protein S11; n=1; Mesostigma
viride|Rep: Ribosomal protein S11 - Mesostigma viride
Length = 128
Score = 33.1 bits (72), Expect = 2.1
Identities = 19/70 (27%), Positives = 35/70 (50%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 290
G+ H+ + N+T + +TD G TI + GM + + +A+ AQ + +CK L
Sbjct: 18 GILHVQTTLNNTIMTLTDRKG-NTIFGFSSGMLGFGGSRKKTRFASRSVAQHMVLRCKQL 76
Query: 291 GITALHIKLR 320
I L + ++
Sbjct: 77 RIQRLILAIK 86
>UniRef50_A2YZN7 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 411
Score = 33.1 bits (72), Expect = 2.1
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = -1
Query: 275 LSNILCSQHSGVG*SLITISLHFHASGNTGNSFSTGQIGNVHECVIEGGEYVCHPEYY-L 99
L NI+ H VG ++T L + GNT ++ IG V C I GG Y +Y L
Sbjct: 116 LLNIIEPFHRFVGRDMMT-DLRYPLKGNTVPFWAVPLIGIVLPCAIFGGIYFKKKNFYDL 174
Query: 98 THQVLG 81
H +LG
Sbjct: 175 HHGILG 180
>UniRef50_Q9PQN5 Cluster: 30S ribosomal protein S11; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S11 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 121
Score = 32.7 bits (71), Expect = 2.7
Identities = 17/67 (25%), Positives = 37/67 (55%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 290
G+A+I A+ N+T + + D G +G + K + + +PY+A +AA+ A+ +
Sbjct: 12 GIAYIHATKNNTIITLADEQGSVLSWASSGSIGYKGTK-KKTPYSAGIAAEAAAKAVIDM 70
Query: 291 GITALHI 311
G+ ++ +
Sbjct: 71 GLKSVEV 77
>UniRef50_Q49081 Cluster: 30S ribosomal protein; n=1; Mycoplasma
capricolum|Rep: 30S ribosomal protein - Mycoplasma
capricolum
Length = 80
Score = 32.3 bits (70), Expect = 3.6
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +3
Query: 111 GVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYA 245
G+AHI ++FN+T V V+D G G + K + +++PYA
Sbjct: 11 GIAHIHSTFNNTIVTVSDEKGNVLSWSSAGAIGFKGSK-KSTPYA 54
>UniRef50_UPI0000586A1C Cluster: PREDICTED: hypothetical protein;
n=2; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 327
Score = 31.9 bits (69), Expect = 4.8
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +3
Query: 27 MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIAR 191
++PRK A++++ +LG H++ E+V + + + +T V V +GRE A+
Sbjct: 72 ISPRKLVAAQQKIASSLGC-HVIHEVVTSITDVTSQDGETVVRVLFENGREIFAK 125
>UniRef50_Q4RG55 Cluster: Chromosome 2 SCAF15106, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 2
SCAF15106, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 255
Score = 31.9 bits (69), Expect = 4.8
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 238 GEASSRSAFTFMPPVTRAIVSRPDRSVTCTNVSLKEANMCAT 113
GEA ++ TF T V+ DR+ T T S +++NM AT
Sbjct: 113 GEAGCKTLHTFQGSGTAGPVTAADRNKTLTGTSTQQSNMSAT 154
>UniRef50_Q2UBW7 Cluster: Predicted protein; n=1; Aspergillus
oryzae|Rep: Predicted protein - Aspergillus oryzae
Length = 488
Score = 31.9 bits (69), Expect = 4.8
Identities = 31/86 (36%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -2
Query: 301 AVIPRVLHFSATSCAANIAA*GEASSRSAFTFMPPVTRAIVSRPDRSVTCTNV--SLKEA 128
AV+ V F S +AN+ A A+S A F P T + P + T T V A
Sbjct: 345 AVVSSVRVFGPAS-SANLEATPVAASSEAI-FRPASTDTVRVTPV-AATSTRVFGPASSA 401
Query: 127 NMCATPNTISPTKCWGPRVT*TSSFA 50
N ATP T+S + +GP + TSS A
Sbjct: 402 NAKATPTTLSSGRVFGPASSETSSRA 427
>UniRef50_UPI0001552E13 Cluster: PREDICTED: hypothetical protein;
n=2; Fungi/Metazoa group|Rep: PREDICTED: hypothetical
protein - Mus musculus
Length = 196
Score = 31.5 bits (68), Expect = 6.3
Identities = 19/76 (25%), Positives = 36/76 (47%)
Frame = -2
Query: 274 SATSCAANIAA*GEASSRSAFTFMPPVTRAIVSRPDRSVTCTNVSLKEANMCATPNTISP 95
S+++C+ + + SS S+ T T +I S S + T+ S + ++ +T +P
Sbjct: 59 SSSTCSTSTTSSTSTSSTSSSTCSTSTTSSITSSTSTSTSSTSTSSTSSTSTSSTSTSTP 118
Query: 94 TKCWGPRVT*TSSFAT 47
T + TSS +T
Sbjct: 119 TPSTSTSTSTTSSTST 134
>UniRef50_A2QS40 Cluster: Remark: ATR1 encodes a Myb-like
transcription factor that modulates ASA1 expression;
n=5; Trichocomaceae|Rep: Remark: ATR1 encodes a Myb-like
transcription factor that modulates ASA1 expression -
Aspergillus niger
Length = 534
Score = 31.5 bits (68), Expect = 6.3
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = -1
Query: 335 VTSSRTELNVQGSYPQGFTFLSNILCSQHSGVG*SLITISLHFHASGNTGNSFSTGQIGN 156
V S T + S+P G LSN + H G+ SL+T ++++ S G G
Sbjct: 429 VVSLITSWGMDMSFPSGTLILSNSMHHHHQGLAASLVTTTVNYSI------SLGLGFAGT 482
Query: 155 VHECVIEGGE 126
V V +GG+
Sbjct: 483 VESNVNDGGK 492
>UniRef50_UPI0000E470A7 Cluster: PREDICTED: similar to ficolin 3;
n=3; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to ficolin 3 - Strongylocentrotus purpuratus
Length = 464
Score = 31.1 bits (67), Expect = 8.3
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 229 SSRSAFTFMPPVTRAIVSRPDRSVTCTNVSLKEANMCATPNTISPTKCWGPRVT*TSSFA 50
++ +A T P T A ++P ++ T + A + P T PT VT T++ A
Sbjct: 131 TTTAATTTQPTTTAATTTQPTTTIATTTQATTTATTTSVPTTTQPTTTQPTTVTATTTQA 190
Query: 49 T 47
T
Sbjct: 191 T 191
>UniRef50_UPI000023D863 Cluster: hypothetical protein FG05948.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG05948.1 - Gibberella zeae PH-1
Length = 187
Score = 31.1 bits (67), Expect = 8.3
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 192 VTGGMKVKADRDEASPYAAMLAAQDVAEKCKTL 290
+T G+K+ A+R+ ASP + AAQD + K L
Sbjct: 25 LTEGIKILAERENASPAEIVAAAQDASNKSTCL 57
>UniRef50_Q1NHD4 Cluster: Putative uncharacterized protein; n=1;
Sphingomonas sp. SKA58|Rep: Putative uncharacterized
protein - Sphingomonas sp. SKA58
Length = 357
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 372 EQTGHQVQESLSCYLQSHGA*CAGQLSPGFYISQQHPVQPT*RRRVK 232
+Q V++ + YL+SH A G+ SPG + HP P R R +
Sbjct: 212 KQPTQNVRQVIRIYLRSHCAIAYGRFSPGDDVPLFHPCTPETRDRTR 258
>UniRef50_A6GFJ6 Cluster: Acyl-CoA dehydrogenase; n=1; Plesiocystis
pacifica SIR-1|Rep: Acyl-CoA dehydrogenase -
Plesiocystis pacifica SIR-1
Length = 641
Score = 31.1 bits (67), Expect = 8.3
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = -1
Query: 389 TSESTESRLGTRSRSLCLVTSSRTELNVQGSYPQGFTFLSNILCSQHSGVG 237
T + E ++G + + C ++ RT ++ G +GF ++ ++ GVG
Sbjct: 272 TIDRAEEKMGHHAAATCAISFDRTPAHLLGKRGEGFKYMLTLMNGARVGVG 322
>UniRef50_A5V8T7 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 625
Score = 31.1 bits (67), Expect = 8.3
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -2
Query: 271 ATSCAANIAA*GEASSRSAFTFMPPVTRAIVSRPDRSVTCT-NVSLKEANMCATPNTISP 95
+++ A ++ A G A++ + T PP A+ S P +T + VS+ CA
Sbjct: 129 SSALAYDVTATGSATTTATTTTAPPCIAALSSTPTYGITLSGGVSITSPG-CAVNTNAGV 187
Query: 94 TKCWGPRVT 68
T WG +T
Sbjct: 188 TVPWGTTIT 196
>UniRef50_A4A0V8 Cluster: Sodium:alanine symporter; n=1;
Blastopirellula marina DSM 3645|Rep: Sodium:alanine
symporter - Blastopirellula marina DSM 3645
Length = 730
Score = 31.1 bits (67), Expect = 8.3
Identities = 21/76 (27%), Positives = 36/76 (47%)
Frame = +3
Query: 66 QVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYA 245
++ L P +V +VF V I ASF + ++ S + + G A +D+ S
Sbjct: 368 EIGLKPVGVVFSVVFAVLCIMASFGGGNMFQSNQSANAAVQLIQG-----AKQDQISELG 422
Query: 246 AMLAAQDVAEKCKTLG 293
+ A + AE+ +TLG
Sbjct: 423 LQIKAAEAAEEWETLG 438
>UniRef50_Q4DXL1 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 625
Score = 31.1 bits (67), Expect = 8.3
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -1
Query: 230 LITISLHFHASGNTGNSFSTGQIGNVHECVIEGGE 126
++T+ L F G++G S +TG + CV+EG E
Sbjct: 74 VVTLLLAFEGHGSSGMSINTGLATKITNCVLEGIE 108
>UniRef50_Q0UJD5 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 263
Score = 31.1 bits (67), Expect = 8.3
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Frame = -2
Query: 232 ASSRSAFTFMPPVTRAIVSRPDRSV----TCTNV---SLKEANMCATPNTISPTKC 86
A SR F+FM P+TR ++ R V TC + L+ +MC+ P ++ C
Sbjct: 139 AGSRELFSFMSPLTRVRIAVAKRKVNLSRTCKELPDCRLRYPSMCSNPRELASLAC 194
>UniRef50_P25370 Cluster: Good for full DBP5 activity protein 2;
n=2; Saccharomyces cerevisiae|Rep: Good for full DBP5
activity protein 2 - Saccharomyces cerevisiae (Baker's
yeast)
Length = 566
Score = 31.1 bits (67), Expect = 8.3
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 87 HLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASP 239
H G + H+F F D V+ +SG + + +V G +KV +RD P
Sbjct: 461 HNAGNDAYYTLHLFMKFCD--VNFRKISGMDDVLKVMGQVKVWGERDVREP 509
>UniRef50_P33076 Cluster: MHC class II transactivator; n=39;
Eutheria|Rep: MHC class II transactivator - Homo sapiens
(Human)
Length = 1130
Score = 31.1 bits (67), Expect = 8.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 108 ILSHPPSAGDQESPEPPLLQLCFFSGPWLSL 16
++ HPP A + E P L CF WL+L
Sbjct: 694 LVQHPPRAAESELAFPSFLLQCFLGALWLAL 724
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 419,462,350
Number of Sequences: 1657284
Number of extensions: 8674350
Number of successful extensions: 27654
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 26267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27629
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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