Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_M14
(398 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M13934-2|AAB59505.1| 151|Homo sapiens ribosomal protein S14 pro... 167 9e-42
BC091474-1|AAH91474.1| 151|Homo sapiens ribosomal protein S14 p... 167 9e-42
BC020515-1|AAH20515.1| 151|Homo sapiens ribosomal protein S14 p... 167 9e-42
BC006784-1|AAH06784.1| 151|Homo sapiens ribosomal protein S14 p... 167 9e-42
BC003401-1|AAH03401.1| 151|Homo sapiens ribosomal protein S14 p... 167 9e-42
BC001126-1|AAH01126.1| 151|Homo sapiens ribosomal protein S14 p... 167 9e-42
BC072682-1|AAH72682.1| 170|Homo sapiens similar to ribosomal pr... 156 3e-38
X74301-1|CAA52354.1| 1130|Homo sapiens (MHC) class II transactiv... 31 1.4
U18288-1|AAA88862.1| 884|Homo sapiens MHC class II transactivat... 31 1.4
U18259-1|AAA88861.1| 1130|Homo sapiens MHC class II transactivat... 31 1.4
EF064747-1|ABK41930.1| 1130|Homo sapiens class II, major histoco... 31 1.4
AY699071-1|AAU06586.1| 1107|Homo sapiens CIITA IV protein. 31 1.4
AF410154-1|AAL04118.1| 932|Homo sapiens MHC2TA protein. 31 1.4
AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid ... 31 1.9
AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid ... 31 1.9
AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid ... 31 1.9
AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid ... 31 1.9
AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid ... 31 1.9
AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protei... 31 1.9
AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein... 31 1.9
AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related prot... 31 1.9
AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein. 31 1.9
AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein. 31 1.9
AK125062-1|BAC86038.1| 343|Homo sapiens protein ( Homo sapiens ... 29 7.5
>M13934-2|AAB59505.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 167 bits (407), Expect = 9e-42
Identities = 81/99 (81%), Positives = 87/99 (87%)
Frame = +3
Query: 27 MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 206
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 207 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99
>BC091474-1|AAH91474.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 167 bits (407), Expect = 9e-42
Identities = 81/99 (81%), Positives = 87/99 (87%)
Frame = +3
Query: 27 MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 206
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 207 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99
>BC020515-1|AAH20515.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 167 bits (407), Expect = 9e-42
Identities = 81/99 (81%), Positives = 87/99 (87%)
Frame = +3
Query: 27 MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 206
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 207 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99
>BC006784-1|AAH06784.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 167 bits (407), Expect = 9e-42
Identities = 81/99 (81%), Positives = 87/99 (87%)
Frame = +3
Query: 27 MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 206
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 207 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99
>BC003401-1|AAH03401.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 167 bits (407), Expect = 9e-42
Identities = 81/99 (81%), Positives = 87/99 (87%)
Frame = +3
Query: 27 MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 206
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 207 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99
>BC001126-1|AAH01126.1| 151|Homo sapiens ribosomal protein S14
protein.
Length = 151
Score = 167 bits (407), Expect = 9e-42
Identities = 81/99 (81%), Positives = 87/99 (87%)
Frame = +3
Query: 27 MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 206
MAPRK K KEE ++LGPQ GE VFGV HIFASFNDTFVHVTDLSG+ETI RVTGGM
Sbjct: 1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGM 60
Query: 207 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
KVKADRDE+SPYAAMLAAQDVA++CK LGITALHIKLRA
Sbjct: 61 KVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRA 99
>BC072682-1|AAH72682.1| 170|Homo sapiens similar to ribosomal
protein S14 protein.
Length = 170
Score = 156 bits (378), Expect = 3e-38
Identities = 75/99 (75%), Positives = 82/99 (82%)
Frame = +3
Query: 27 MAPRKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 206
MAP K K KEE + LGPQ GE VFGV HIFASFNDTFVHVTDLSG++TI RVTGGM
Sbjct: 1 MAPGKGKEKKEEQVINLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKQTICRVTGGM 60
Query: 207 KVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
KVKADRDE+SPYAAML QDVA++CK LGI ALHI+LRA
Sbjct: 61 KVKADRDESSPYAAMLTTQDVAQRCKELGIIALHIQLRA 99
>X74301-1|CAA52354.1| 1130|Homo sapiens (MHC) class II
transactivator protein.
Length = 1130
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 108 ILSHPPSAGDQESPEPPLLQLCFFSGPWLSL 16
++ HPP A + E P L CF WL+L
Sbjct: 694 LVQHPPRAAESELAFPSFLLQCFLGALWLAL 724
>U18288-1|AAA88862.1| 884|Homo sapiens MHC class II transactivator
CIITA protein.
Length = 884
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 108 ILSHPPSAGDQESPEPPLLQLCFFSGPWLSL 16
++ HPP A + E P L CF WL+L
Sbjct: 646 LVQHPPRAAESELAFPSFLLQCFLGALWLAL 676
>U18259-1|AAA88861.1| 1130|Homo sapiens MHC class II transactivator
CIITA protein.
Length = 1130
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 108 ILSHPPSAGDQESPEPPLLQLCFFSGPWLSL 16
++ HPP A + E P L CF WL+L
Sbjct: 694 LVQHPPRAAESELAFPSFLLQCFLGALWLAL 724
>EF064747-1|ABK41930.1| 1130|Homo sapiens class II, major
histocompatibility complex, transactivator protein.
Length = 1130
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 108 ILSHPPSAGDQESPEPPLLQLCFFSGPWLSL 16
++ HPP A + E P L CF WL+L
Sbjct: 694 LVQHPPRAAESELAFPSFLLQCFLGALWLAL 724
>AY699071-1|AAU06586.1| 1107|Homo sapiens CIITA IV protein.
Length = 1107
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 108 ILSHPPSAGDQESPEPPLLQLCFFSGPWLSL 16
++ HPP A + E P L CF WL+L
Sbjct: 671 LVQHPPRAAESELAFPSFLLQCFLGALWLAL 701
>AF410154-1|AAL04118.1| 932|Homo sapiens MHC2TA protein.
Length = 932
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -3
Query: 108 ILSHPPSAGDQESPEPPLLQLCFFSGPWLSL 16
++ HPP A + E P L CF WL+L
Sbjct: 694 LVQHPPRAAESELAFPSFLLQCFLGALWLAL 724
>AL357713-1|CAH73433.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 120 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 31
+PP SHPP+ Q +P+PP Q F G
Sbjct: 1013 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042
>AL356072-3|CAH70517.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 120 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 31
+PP SHPP+ Q +P+PP Q F G
Sbjct: 745 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 774
>AL356072-2|CAH70516.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 120 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 31
+PP SHPP+ Q +P+PP Q F G
Sbjct: 1013 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042
>AL096855-2|CAI19209.1| 1298|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1298
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 120 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 31
+PP SHPP+ Q +P+PP Q F G
Sbjct: 745 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 774
>AL096855-1|CAI19208.1| 1566|Homo sapiens arginine-glutamic acid
dipeptide (RE) repeats protein.
Length = 1566
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 120 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 31
+PP SHPP+ Q +P+PP Q F G
Sbjct: 1013 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042
>AF118275-1|AAD27584.1| 995|Homo sapiens atrophin-related protein
ARP protein.
Length = 995
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 120 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 31
+PP SHPP+ Q +P+PP Q F G
Sbjct: 442 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 471
>AF041104-1|AAC28264.1| 1012|Homo sapiens atrophin-1 like protein
protein.
Length = 1012
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 120 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 31
+PP SHPP+ Q +P+PP Q F G
Sbjct: 459 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 488
>AF016005-1|AAC31120.1| 1012|Homo sapiens atrophin-1 related protein
protein.
Length = 1012
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 120 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 31
+PP SHPP+ Q +P+PP Q F G
Sbjct: 459 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 488
>AB036737-1|BAA95898.1| 1566|Homo sapiens RERE protein.
Length = 1566
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 120 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 31
+PP SHPP+ Q +P+PP Q F G
Sbjct: 1013 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1042
>AB007927-1|BAA32303.3| 1552|Homo sapiens KIAA0458 protein protein.
Length = 1552
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 120 VPPRILSHPPSAGDQESPEPPLLQLCFFSG 31
+PP SHPP+ Q +P+PP Q F G
Sbjct: 999 LPPPPASHPPTGLHQVAPQPPFAQHPFVPG 1028
>AK125062-1|BAC86038.1| 343|Homo sapiens protein ( Homo sapiens
cDNA FLJ43072 fis, clone BRTHA3010366. ).
Length = 343
Score = 28.7 bits (61), Expect = 7.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 91 WWVR*YSGWHTYSPPSMTHSCTLPICPVEK 180
WW+R + W YSP +P+C +E+
Sbjct: 12 WWLRTDNEWSLYSPGLSWVVAIMPLCSLER 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,538,378
Number of Sequences: 237096
Number of extensions: 1487559
Number of successful extensions: 5131
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5128
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -