Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0003_M14
         (398 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00033-5|AAC48301.1|  152|Caenorhabditis elegans Ribosomal prote...   163   3e-41
Z81125-4|CAB03383.3|  594|Caenorhabditis elegans Hypothetical pr...    28   2.8  
U80451-11|AAB37845.2|  206|Caenorhabditis elegans Glutathione s-...    27   3.7  
U23448-3|AAO26017.1|  612|Caenorhabditis elegans Egg laying defe...    27   3.7  
U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defe...    27   3.7  
U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defe...    27   3.7  
AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.     27   3.7  
Z81502-2|CAB04106.2|  720|Caenorhabditis elegans Hypothetical pr...    27   5.0  
AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical ...    27   5.0  
AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical ...    27   5.0  
Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical pr...    27   6.5  
Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical p...    27   6.5  
AF125954-3|AAD14706.3|  323|Caenorhabditis elegans Serpentine re...    27   6.5  
AC006769-4|AAF60584.1|  323|Caenorhabditis elegans Hypothetical ...    27   6.5  
Z75533-1|CAA99815.1|  423|Caenorhabditis elegans Hypothetical pr...    26   8.7  
U29537-1|AAK31507.1|  610|Caenorhabditis elegans Vaccinia relate...    26   8.7  
AL031627-1|CAA20945.1|  550|Caenorhabditis elegans Hypothetical ...    26   8.7  

>U00033-5|AAC48301.1|  152|Caenorhabditis elegans Ribosomal protein,
           small subunitprotein 14 protein.
          Length = 152

 Score =  163 bits (397), Expect = 3e-41
 Identities = 78/100 (78%), Positives = 88/100 (88%), Gaps = 1/100 (1%)
 Frame = +3

Query: 27  MAP-RKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDTFVHVTDLSGRETIARVTGG 203
           MAP RK K  +E+  V+LGPQ   GE++FGVAHIFASFNDTFVH+TD+SGRETI RVTGG
Sbjct: 1   MAPARKGKAKEEQAVVSLGPQAKEGELIFGVAHIFASFNDTFVHITDISGRETIVRVTGG 60

Query: 204 MKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRA 323
           MKVKADRDE+SPYAAMLAAQDVA++CK LGI ALHIKLRA
Sbjct: 61  MKVKADRDESSPYAAMLAAQDVADRCKQLGINALHIKLRA 100


>Z81125-4|CAB03383.3|  594|Caenorhabditis elegans Hypothetical
           protein T22A3.6 protein.
          Length = 594

 Score = 27.9 bits (59), Expect = 2.8
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = -1

Query: 377 TESRLGTRSRSLCLVTSSRTELNVQGSYPQGFTFLSNILCSQ 252
           TESRL   + + C++ + R  + V+ SY +   F +  L S+
Sbjct: 487 TESRLFMNTEASCMLLNRRNSVEVKNSYKESPFFTNEKLVSE 528


>U80451-11|AAB37845.2|  206|Caenorhabditis elegans Glutathione
           s-transferase protein 6 protein.
          Length = 206

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -1

Query: 323 RTELNVQGSYPQGFTFLSNILCSQHSG--VG*SLITISL 213
           RT++ V  ++ + F F  NIL S HSG  VG SL  + L
Sbjct: 121 RTDVFVP-AFKKNFEFFENILASNHSGFFVGNSLTWVDL 158


>U23448-3|AAO26017.1|  612|Caenorhabditis elegans Egg laying
           defective protein 27,isoform c protein.
          Length = 612

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 387 EREHGEQTGHQVQESLSCYLQSHGA*CAGQLSP 289
           ERE   Q   Q Q++L    Q H A  A QL+P
Sbjct: 408 ERERERQHQQQAQQALHQQQQQHAAAAANQLNP 440


>U23448-2|AAM81127.1| 1124|Caenorhabditis elegans Egg laying defective
            protein 27,isoform b protein.
          Length = 1124

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 387  EREHGEQTGHQVQESLSCYLQSHGA*CAGQLSP 289
            ERE   Q   Q Q++L    Q H A  A QL+P
Sbjct: 920  ERERERQHQQQAQQALHQQQQQHAAAAANQLNP 952


>U23448-1|AAM81126.1| 1129|Caenorhabditis elegans Egg laying defective
            protein 27,isoform a protein.
          Length = 1129

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 387  EREHGEQTGHQVQESLSCYLQSHGA*CAGQLSP 289
            ERE   Q   Q Q++L    Q H A  A QL+P
Sbjct: 925  ERERERQHQQQAQQALHQQQQQHAAAAANQLNP 957


>AF096618-1|AAD27790.1| 1129|Caenorhabditis elegans EGL-27 protein.
          Length = 1129

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 387  EREHGEQTGHQVQESLSCYLQSHGA*CAGQLSP 289
            ERE   Q   Q Q++L    Q H A  A QL+P
Sbjct: 925  ERERERQHQQQAQQALHQQQQQHAAAAANQLNP 957


>Z81502-2|CAB04106.2|  720|Caenorhabditis elegans Hypothetical
           protein F14B6.2 protein.
          Length = 720

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +3

Query: 9   KAKG*AMAPRKNKVAKEEVQVTLGPQHLVGE 101
           K KG   + + N+  K + +VT  P+HLVG+
Sbjct: 310 KGKGLKKSKKLNQKPKSDEEVTKQPRHLVGK 340


>AF016688-9|AAN65322.1|  816|Caenorhabditis elegans Hypothetical
           protein F18A12.8b protein.
          Length = 816

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 205 MPPVTRAIVSRPDRSVTCTNVSLKEANMCATPNTI 101
           +PP+     + P+  VT +    KE  +C+TP  +
Sbjct: 133 VPPIVPEAPTSPEPEVTTSTEKPKEPEVCSTPGCV 167


>AF016688-8|AAB66079.2|  848|Caenorhabditis elegans Hypothetical
           protein F18A12.8a protein.
          Length = 848

 Score = 27.1 bits (57), Expect = 5.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -2

Query: 205 MPPVTRAIVSRPDRSVTCTNVSLKEANMCATPNTI 101
           +PP+     + P+  VT +    KE  +C+TP  +
Sbjct: 133 VPPIVPEAPTSPEPEVTTSTEKPKEPEVCSTPGCV 167


>Z99283-7|CAB16537.2|  985|Caenorhabditis elegans Hypothetical
           protein Y70C5C.1 protein.
          Length = 985

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -1

Query: 131 GEYVCHPEYYLTHQVLGTKSHLNLL 57
           GE++  PE+Y++H ++G + H +LL
Sbjct: 287 GEFLSQPEHYISH-LIGHEGHGSLL 310


>Z99278-1|CAB16490.1|  793|Caenorhabditis elegans Hypothetical
           protein Y53C12B.1 protein.
          Length = 793

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 218 SLHFHASGNTGNSFSTGQIGNVHECVIEGGEYV 120
           S+   A G+ GN F+ G+ G V E VIE  + V
Sbjct: 237 SIEGGAIGHNGNLFTVGEEGVVKEFVIETAKLV 269


>Z92782-14|CAI46605.1|  985|Caenorhabditis elegans Hypothetical
           protein Y70C5C.1 protein.
          Length = 985

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -1

Query: 131 GEYVCHPEYYLTHQVLGTKSHLNLL 57
           GE++  PE+Y++H ++G + H +LL
Sbjct: 287 GEFLSQPEHYISH-LIGHEGHGSLL 310


>AF125954-3|AAD14706.3|  323|Caenorhabditis elegans Serpentine
           receptor, class d (delta)protein 71 protein.
          Length = 323

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 338 LVTSSRTELNVQGSYPQGFTFLSNILCSQHSGV 240
           LVT+    +++Q     GF+ ++NILCS  +G+
Sbjct: 159 LVTTFYPTIDLQNYTLSGFSDVTNILCSTATGI 191


>AC006769-4|AAF60584.1|  323|Caenorhabditis elegans Hypothetical
           protein Y45G12C.9 protein.
          Length = 323

 Score = 26.6 bits (56), Expect = 6.5
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = -1

Query: 338 LVTSSRTELNVQGSYPQGFTFLSNILCSQHSGV 240
           LVT+    +++Q     GF+ ++NILCS  +G+
Sbjct: 159 LVTTFYPTIDLQNYTLSGFSDVTNILCSTATGI 191


>Z75533-1|CAA99815.1|  423|Caenorhabditis elegans Hypothetical
           protein C54G4.2 protein.
          Length = 423

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +3

Query: 180 TIARVTGGMKVKADRDEASPYAAMLAAQDVAEK 278
           T  ++  G+ ++  RD+ +PY  M A QD +EK
Sbjct: 260 TTGKMDDGI-IEESRDQLNPYDTMAALQDRSEK 291


>U29537-1|AAK31507.1|  610|Caenorhabditis elegans Vaccinia related
           kinase protein 1 protein.
          Length = 610

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 188 GNSFSTGQIGNVHECVIEG 132
           G  F+TG  G +H C  EG
Sbjct: 35  GKQFATGGFGRIHTCTEEG 53


>AL031627-1|CAA20945.1|  550|Caenorhabditis elegans Hypothetical
           protein Y102A5C.4 protein.
          Length = 550

 Score = 26.2 bits (55), Expect = 8.7
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
 Frame = +3

Query: 36  RKNKVAKEEVQVTLGPQHLVGEIVFGVAHIFASFNDT--FVHVTDLSGR 176
           RK ++  E+VQ TLG    VGE V  +A   A  N T  FV +++  G+
Sbjct: 20  RKCQLISEDVQQTLGSLTNVGEYVIELADNVAPTNLTRKFVVLSNTIGK 68


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,645,910
Number of Sequences: 27780
Number of extensions: 208038
Number of successful extensions: 656
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 656
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)