BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0003_M14
(398 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 27 0.10
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 24 0.74
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 0.97
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 1.3
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 3.9
AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein. 21 5.2
AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta... 21 5.2
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 6.9
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 6.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 6.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 6.9
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 20 9.1
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 26.6 bits (56), Expect = 0.10
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 306 AGQLSPGFYISQQHPVQPT*RRRVKPHH 223
AG L P ++ Q HP Q R PHH
Sbjct: 309 AGFLPPSYHPHQHHPSQYHPHRGSSPHH 336
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 23.8 bits (49), Expect = 0.74
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 338 LVTSSRTELNVQGSYPQGFTFLSNILCSQHSG 243
++TS + E+N G+Y F SN + Q SG
Sbjct: 28 VITSQQLEVNFDGNYINNFE-TSNGISHQESG 58
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 23.4 bits (48), Expect = 0.97
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = -1
Query: 179 FSTGQIGNVHECVIEGGEYVCH--PEYYL 99
F TG +GNV CV+ H YYL
Sbjct: 64 FVTGLVGNVSTCVVIARNKSMHTATNYYL 92
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.0 bits (47), Expect = 1.3
Identities = 8/30 (26%), Positives = 16/30 (53%)
Frame = -2
Query: 232 ASSRSAFTFMPPVTRAIVSRPDRSVTCTNV 143
A R FT+ + ++I+ PD+ +T +
Sbjct: 501 ADVRPPFTYASLIRQSIIESPDKQLTLNEI 530
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 3.9
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = -2
Query: 196 VTRAIVSRPDRSVTCT--NVSLKEANMCATPNTISP 95
++ A + RPD +V C +S+ EA T SP
Sbjct: 327 ISGAPIERPDHAVLCVYMGLSMVEAIKYVQQTTNSP 362
>AY823258-1|AAX18443.1| 145|Apis mellifera pburs protein.
Length = 145
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 105 VFGVAHIFASFNDTFVHVTDLSGRETI 185
+F + IF N+T VTD ET+
Sbjct: 13 IFLILIIFIYSNETIAQVTDDENCETL 39
>AM420632-1|CAM06632.1| 145|Apis mellifera bursicon subunit beta
protein precursor protein.
Length = 145
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +3
Query: 105 VFGVAHIFASFNDTFVHVTDLSGRETI 185
+F + IF N+T VTD ET+
Sbjct: 13 IFLILIIFIYSNETIAQVTDDENCETL 39
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 20.6 bits (41), Expect = 6.9
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 179 FSTGQIGNVHECVI 138
F TG +GN+ C++
Sbjct: 44 FVTGFVGNIITCIV 57
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 6.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -1
Query: 341 CLVTSSRTELNVQGSYP 291
C+V + LN++ SYP
Sbjct: 605 CIVPTGDLPLNIRWSYP 621
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 152 HECVIEGGEYVCHPE 108
H V +GGEY C E
Sbjct: 488 HVMVEDGGEYSCMAE 502
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1
Query: 152 HECVIEGGEYVCHPE 108
H V +GGEY C E
Sbjct: 488 HVMVEDGGEYSCMAE 502
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 20.2 bits (40), Expect = 9.1
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -2
Query: 166 RSVTCTNVSLKEANMCATPNTISP 95
R++ +S E+NM +PN + P
Sbjct: 459 RTMNRKQISELESNMQISPNELKP 482
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,196
Number of Sequences: 438
Number of extensions: 2493
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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